Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40944
         (501 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY173949-1|AAO49719.1|  112|Homo sapiens mitochondrial NADH oxid...    34   0.32 
X99726-1|CAB56704.1|  108|Homo sapiens mitochondrial NADH-Ubiqui...    33   0.56 
CR542190-1|CAG46987.1|  108|Homo sapiens NDUFV3 protein.               33   0.56 
CR542174-1|CAG46971.1|  108|Homo sapiens NDUFV3 protein.               33   0.56 
BC054016-1|AAH54016.1|  108|Homo sapiens NADH dehydrogenase (ubi...    33   0.56 
BC033766-1|AAH33766.1|  108|Homo sapiens NADH dehydrogenase (ubi...    33   0.56 
BC021217-1|AAH21217.2|  473|Homo sapiens NADH dehydrogenase (ubi...    33   0.56 
AK056041-1|BAB71080.1|  456|Homo sapiens protein ( Homo sapiens ...    33   0.56 
AB038163-1|BAB13732.1|  108|Homo sapiens NADH-Ubiquinone oxidore...    33   0.56 

>AY173949-1|AAO49719.1|  112|Homo sapiens mitochondrial NADH
           oxidoreductase-like protein protein.
          Length = 112

 Score = 33.9 bits (74), Expect = 0.32
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = +3

Query: 225 RHSSSFATCGPGVDPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 377
           + +SS        +P     YK  ++  Y   +F +  +E++K+R+PQPS+
Sbjct: 55  KDASSLKPAPVPAEPFDNTTYKNLQHHDYSTYTFLDLNLELSKFRMPQPSS 105


>X99726-1|CAB56704.1|  108|Homo sapiens mitochondrial
           NADH-Ubiquinone oxidoreductase 10-kDa subunit protein.
          Length = 108

 Score = 33.1 bits (72), Expect = 0.56
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +3

Query: 264 DPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 377
           +P     YK  ++  Y   +F +  +E++K+R+PQPS+
Sbjct: 64  EPFDNTTYKNLQHHDYSTYTFLDLNLELSKFRMPQPSS 101


>CR542190-1|CAG46987.1|  108|Homo sapiens NDUFV3 protein.
          Length = 108

 Score = 33.1 bits (72), Expect = 0.56
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +3

Query: 264 DPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 377
           +P     YK  ++  Y   +F +  +E++K+R+PQPS+
Sbjct: 64  EPFDNTTYKNLQHHDYSTYTFLDLNLELSKFRMPQPSS 101


>CR542174-1|CAG46971.1|  108|Homo sapiens NDUFV3 protein.
          Length = 108

 Score = 33.1 bits (72), Expect = 0.56
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +3

Query: 264 DPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 377
           +P     YK  ++  Y   +F +  +E++K+R+PQPS+
Sbjct: 64  EPFDNTTYKNLQHHDYSTYTFLDLNLELSKFRMPQPSS 101


>BC054016-1|AAH54016.1|  108|Homo sapiens NADH dehydrogenase
           (ubiquinone) flavoprotein 3, 10kDa protein.
          Length = 108

 Score = 33.1 bits (72), Expect = 0.56
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +3

Query: 264 DPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 377
           +P     YK  ++  Y   +F +  +E++K+R+PQPS+
Sbjct: 64  EPFDNTTYKNLQHHDYSTYTFLDLNLELSKFRMPQPSS 101


>BC033766-1|AAH33766.1|  108|Homo sapiens NADH dehydrogenase
           (ubiquinone) flavoprotein 3, 10kDa protein.
          Length = 108

 Score = 33.1 bits (72), Expect = 0.56
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +3

Query: 264 DPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 377
           +P     YK  ++  Y   +F +  +E++K+R+PQPS+
Sbjct: 64  EPFDNTTYKNLQHHDYSTYTFLDLNLELSKFRMPQPSS 101


>BC021217-1|AAH21217.2|  473|Homo sapiens NADH dehydrogenase
           (ubiquinone) flavoprotein 3, 10kDa protein.
          Length = 473

 Score = 33.1 bits (72), Expect = 0.56
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +3

Query: 264 DPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 377
           +P     YK  ++  Y   +F +  +E++K+R+PQPS+
Sbjct: 429 EPFDNTTYKNLQHHDYSTYTFLDLNLELSKFRMPQPSS 466


>AK056041-1|BAB71080.1|  456|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31479 fis, clone NT2NE2001634, moderately
           similar to NADH-UBIQUINONE OXIDOREDUCTASE 9 KD SUBUNIT
           PRECURSOR ).
          Length = 456

 Score = 33.1 bits (72), Expect = 0.56
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +3

Query: 264 DPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 377
           +P     YK  ++  Y   +F +  +E++K+R+PQPS+
Sbjct: 412 EPFDNTTYKNLQHHDYSTYTFLDLNLELSKFRMPQPSS 449


>AB038163-1|BAB13732.1|  108|Homo sapiens NADH-Ubiquinone
           oxidoreductase protein.
          Length = 108

 Score = 33.1 bits (72), Expect = 0.56
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +3

Query: 264 DPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 377
           +P     YK  ++  Y   +F +  +E++K+R+PQPS+
Sbjct: 64  EPFDNTTYKNLQHHDYSTYTFLDLNLELSKFRMPQPSS 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,652,352
Number of Sequences: 237096
Number of extensions: 1358592
Number of successful extensions: 2098
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2098
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)