BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40940
(563 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 25 0.53
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 2.1
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 2.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 2.1
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 23 2.1
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 2.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 3.7
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 4.9
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.9
M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 21 6.5
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 6.5
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 6.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 6.5
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 6.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 6.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 6.5
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 6.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 6.5
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 6.5
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 6.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 6.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 6.5
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 6.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 6.5
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 6.5
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 21 8.6
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 25.0 bits (52), Expect = 0.53
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = -2
Query: 187 KDLLGREERLQVVDVEQYPGVVQRGQL 107
+ L ++++ QVV VEQY + ++GQ+
Sbjct: 660 QSLTYQDQQYQVVSVEQYQQLKEQGQI 686
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.0 bits (47), Expect = 2.1
Identities = 9/38 (23%), Positives = 20/38 (52%)
Frame = +2
Query: 2 ANAAKRRDDVKVTKGREQLEEAKRTYEILNSELHDELP 115
+N + DD+ + +G E ++ + + E+H +LP
Sbjct: 103 SNKLESSDDISLFRGPEGIQINATELQKIKLEIHRDLP 140
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.0 bits (47), Expect = 2.1
Identities = 9/38 (23%), Positives = 20/38 (52%)
Frame = +2
Query: 2 ANAAKRRDDVKVTKGREQLEEAKRTYEILNSELHDELP 115
+N + DD+ + +G E ++ + + E+H +LP
Sbjct: 103 SNKLESSDDISLFRGPEGIQINATELQKIKLEIHRDLP 140
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.0 bits (47), Expect = 2.1
Identities = 9/38 (23%), Positives = 20/38 (52%)
Frame = +2
Query: 2 ANAAKRRDDVKVTKGREQLEEAKRTYEILNSELHDELP 115
+N + DD+ + +G E ++ + + E+H +LP
Sbjct: 103 SNKLESSDDISLFRGPEGIQINATELQKIKLEIHRDLP 140
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -1
Query: 503 GSLATGAGSLTGVPGSLGSGAVSLTGAGSLFPESVGESPLSA 378
G + G G + G S+ +GA SLT + PE + + +A
Sbjct: 7 GGSSAGVGVVGGTIASVVAGAASLTLVKAETPEHLAGTSTTA 48
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Frame = +2
Query: 440 PHRTPKTPER---PSKSQLRLPKNPYG 511
PH++P+ P+R P+ SQ P P G
Sbjct: 27 PHQSPQAPQRGSPPNPSQGPPPGGPPG 53
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 433 KETAPDPKDPGTPVKEPAPVAKEP 504
+ T+P P+ P PV+E + EP
Sbjct: 14 RSTSPLPRKPVNPVQELKALFAEP 37
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = +2
Query: 440 PHRTPKTPERPSKSQLRLPKNPYGCRRTD 526
PH P PE P + +N C R +
Sbjct: 463 PHHHPHPPETPGPQVETILQNACFCARNE 491
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 32 KVTKGREQLEEAKRTYEILNS 94
+V GRE+L KRT N+
Sbjct: 1252 RVVDGREELNHGKRTLPAKNT 1272
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 32 KVTKGREQLEEAKRTYEILNS 94
+V GRE+L KRT N+
Sbjct: 1248 RVVDGREELNHGKRTLPAKNT 1268
>M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H17. ).
Length = 79
Score = 21.4 bits (43), Expect = 6.5
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 425 LRSKRPHRTPKTP 463
LR +P+R P+TP
Sbjct: 3 LRKHKPNRKPRTP 15
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 23 DDVKVTKGREQLEEAKRTYEILNSELHDELP 115
DD+ + +G E ++ + + E+H +LP
Sbjct: 110 DDISLFRGPEGIQINATELQKIKLEIHRDLP 140
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 23 DDVKVTKGREQLEEAKRTYEILNSELHDELP 115
DD+ + +G E ++ + + E+H +LP
Sbjct: 110 DDISLFRGPEGIQINATELQKIKLEIHRDLP 140
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 23 DDVKVTKGREQLEEAKRTYEILNSELHDELP 115
DD+ + +G E ++ + + E+H +LP
Sbjct: 110 DDISLFRGPEGIQINATELQKIKLEIHRDLP 140
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 23 DDVKVTKGREQLEEAKRTYEILNSELHDELP 115
DD+ + +G E ++ + + E+H +LP
Sbjct: 110 DDISLFRGPEGIQINATELQKIKLEIHRDLP 140
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 23 DDVKVTKGREQLEEAKRTYEILNSELHDELP 115
DD+ + +G E ++ + + E+H +LP
Sbjct: 110 DDISLFRGPEGIQINATELQKIKLEIHRDLP 140
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 23 DDVKVTKGREQLEEAKRTYEILNSELHDELP 115
DD+ + +G E ++ + + E+H +LP
Sbjct: 110 DDISLFRGPEGIQINATELQKIKLEIHRDLP 140
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 23 DDVKVTKGREQLEEAKRTYEILNSELHDELP 115
DD+ + +G E ++ + + E+H +LP
Sbjct: 110 DDISLFRGPEGIQINATELQKIKLEIHRDLP 140
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 23 DDVKVTKGREQLEEAKRTYEILNSELHDELP 115
DD+ + +G E ++ + + E+H +LP
Sbjct: 110 DDISLFRGPEGIQINATELQKIKLEIHRDLP 140
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 23 DDVKVTKGREQLEEAKRTYEILNSELHDELP 115
DD+ + +G E ++ + + E+H +LP
Sbjct: 110 DDISLFRGPEGIQINATELQKIKLEIHRDLP 140
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 23 DDVKVTKGREQLEEAKRTYEILNSELHDELP 115
DD+ + +G E ++ + + E+H +LP
Sbjct: 110 DDISLFRGPEGIQINATELQKIKLEIHRDLP 140
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 23 DDVKVTKGREQLEEAKRTYEILNSELHDELP 115
DD+ + +G E ++ + + E+H +LP
Sbjct: 110 DDISLFRGPEGIQINATELQKIKLEIHRDLP 140
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 23 DDVKVTKGREQLEEAKRTYEILNSELHDELP 115
DD+ + +G E ++ + + E+H +LP
Sbjct: 110 DDISLFRGPEGIQINATELQKIKLEIHRDLP 140
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 23 DDVKVTKGREQLEEAKRTYEILNSELHDELP 115
DD+ + +G E ++ + + E+H +LP
Sbjct: 110 DDISLFRGPEGIQINATELQKIKLEIHRDLP 140
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 23 DDVKVTKGREQLEEAKRTYEILNSELHDELP 115
DD+ + +G E ++ + + E+H +LP
Sbjct: 110 DDISLFRGPEGIQINATELQKIKLEIHRDLP 140
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 23 DDVKVTKGREQLEEAKRTYEILNSELHDELP 115
DD+ + +G E ++ + + E+H +LP
Sbjct: 110 DDISLFRGPEGIQINATELQKIKLEIHRDLP 140
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.0 bits (42), Expect = 8.6
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -2
Query: 211 EHLGAFEMKDLLGREERLQVVDVEQYPGVVQRGQLVVQ 98
+HL A E + ++++ Q + PG+ R Q Q
Sbjct: 193 QHLQAHEQHMMYQQQQQSQAASQQSQPGMHPRQQQQAQ 230
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,350
Number of Sequences: 438
Number of extensions: 2534
Number of successful extensions: 27
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -