Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40939
(550 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18 pro... 112 9e-25
DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18 p... 112 9e-25
BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18 p... 112 9e-25
BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18 p... 112 9e-25
BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18 p... 112 9e-25
AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18 p... 112 9e-25
U94364-1|AAB84379.1| 461|Homo sapiens glycogenin-2 gamma protein. 29 8.1
U94363-1|AAB84378.1| 469|Homo sapiens glycogenin-2 beta protein. 29 8.1
U94362-1|AAB84377.1| 501|Homo sapiens glycogenin-2 alpha protein. 29 8.1
U94360-1|AAB84375.1| 342|Homo sapiens glycogenin-2 delta protein. 29 8.1
U94358-1|AAB84374.1| 298|Homo sapiens glycogenin-2 epsilon prot... 29 8.1
DQ424901-1|ABD83666.1| 430|Homo sapiens glycogenin 2 protein. 29 8.1
BC117263-1|AAI17264.1| 1069|Homo sapiens SLC24A1 protein protein. 29 8.1
BC023152-1|AAH23152.1| 470|Homo sapiens glycogenin 2 protein. 29 8.1
AF179624-1|AAF61855.1| 501|Homo sapiens glycogenin 2 protein. 29 8.1
AF062922-1|AAC77912.1| 1099|Homo sapiens retinal rod Na-Ca+K exc... 29 8.1
AF062921-1|AAC16732.1| 1099|Homo sapiens retinal rod Na-Ca+K exc... 29 8.1
AF026132-1|AAB97832.1| 1081|Homo sapiens retinal rod Na+/Ca+, K+... 29 8.1
AB014602-1|BAA31677.2| 988|Homo sapiens KIAA0702 protein protein. 29 8.1
>L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 112 bits (269), Expect = 9e-25
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Frame = +1
Query: 253 QIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 432
++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R RE RHFG
Sbjct: 94 EVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFG 153
Query: 433 PAPGAPRSHTKPYVRTKGH--EKAR 501
APG P SHTKPYVR+KG E+AR
Sbjct: 154 KAPGTPHSHTKPYVRSKGRKFERAR 178
Score = 93.5 bits (222), Expect = 4e-19
Identities = 47/81 (58%), Positives = 55/81 (67%)
Frame = +2
Query: 2 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARH 181
DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+S+SR+ R
Sbjct: 10 DRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRK 69
Query: 182 MKKPTREGLIAVVVGTVTNDV 244
MK P RE AVVVGT+T+DV
Sbjct: 70 MKLPGRENKTAVVVGTITDDV 90
>DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18
protein.
Length = 164
Score = 112 bits (269), Expect = 9e-25
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Frame = +1
Query: 253 QIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 432
++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R RE RHFG
Sbjct: 71 EVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFG 130
Query: 433 PAPGAPRSHTKPYVRTKGH--EKAR 501
APG P SHTKPYVR+KG E+AR
Sbjct: 131 KAPGTPHSHTKPYVRSKGRKFERAR 155
Score = 77.0 bits (181), Expect = 4e-14
Identities = 35/52 (67%), Positives = 43/52 (82%)
Frame = +2
Query: 89 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDV 244
TN+ FNQ+VL+RLFMSR NRPP+S+SR+ R MK P RE AVVVGT+T+DV
Sbjct: 16 TNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDV 67
>BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 112 bits (269), Expect = 9e-25
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Frame = +1
Query: 253 QIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 432
++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R RE RHFG
Sbjct: 94 EVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFG 153
Query: 433 PAPGAPRSHTKPYVRTKGH--EKAR 501
APG P SHTKPYVR+KG E+AR
Sbjct: 154 KAPGTPHSHTKPYVRSKGRKFERAR 178
Score = 91.5 bits (217), Expect = 2e-18
Identities = 46/81 (56%), Positives = 54/81 (66%)
Frame = +2
Query: 2 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARH 181
DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+ +SR+ R
Sbjct: 10 DRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLCLSRMIRK 69
Query: 182 MKKPTREGLIAVVVGTVTNDV 244
MK P RE AVVVGT+T+DV
Sbjct: 70 MKLPGRENKTAVVVGTITDDV 90
>BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 112 bits (269), Expect = 9e-25
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Frame = +1
Query: 253 QIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 432
++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R RE RHFG
Sbjct: 94 EVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFG 153
Query: 433 PAPGAPRSHTKPYVRTKGH--EKAR 501
APG P SHTKPYVR+KG E+AR
Sbjct: 154 KAPGTPHSHTKPYVRSKGRKFERAR 178
Score = 93.5 bits (222), Expect = 4e-19
Identities = 47/81 (58%), Positives = 55/81 (67%)
Frame = +2
Query: 2 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARH 181
DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+S+SR+ R
Sbjct: 10 DRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRK 69
Query: 182 MKKPTREGLIAVVVGTVTNDV 244
MK P RE AVVVGT+T+DV
Sbjct: 70 MKLPGRENKTAVVVGTITDDV 90
>BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 112 bits (269), Expect = 9e-25
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Frame = +1
Query: 253 QIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 432
++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R RE RHFG
Sbjct: 94 EVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFG 153
Query: 433 PAPGAPRSHTKPYVRTKGH--EKAR 501
APG P SHTKPYVR+KG E+AR
Sbjct: 154 KAPGTPHSHTKPYVRSKGRKFERAR 178
Score = 93.5 bits (222), Expect = 4e-19
Identities = 47/81 (58%), Positives = 55/81 (67%)
Frame = +2
Query: 2 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARH 181
DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+S+SR+ R
Sbjct: 10 DRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRK 69
Query: 182 MKKPTREGLIAVVVGTVTNDV 244
MK P RE AVVVGT+T+DV
Sbjct: 70 MKLPGRENKTAVVVGTITDDV 90
>AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 112 bits (269), Expect = 9e-25
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Frame = +1
Query: 253 QIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 432
++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R RE RHFG
Sbjct: 94 EVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFG 153
Query: 433 PAPGAPRSHTKPYVRTKGH--EKAR 501
APG P SHTKPYVR+KG E+AR
Sbjct: 154 KAPGTPHSHTKPYVRSKGRKFERAR 178
Score = 93.5 bits (222), Expect = 4e-19
Identities = 47/81 (58%), Positives = 55/81 (67%)
Frame = +2
Query: 2 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARH 181
DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+S+SR+ R
Sbjct: 10 DRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRK 69
Query: 182 MKKPTREGLIAVVVGTVTNDV 244
MK P RE AVVVGT+T+DV
Sbjct: 70 MKLPGRENKTAVVVGTITDDV 90
>U94364-1|AAB84379.1| 461|Homo sapiens glycogenin-2 gamma protein.
Length = 461
Score = 29.5 bits (63), Expect = 8.1
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -2
Query: 417 CLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSS--HRHLRYLYSL 244
C S + ++Q L + ++ +F + Q SFF N ++ H+HL ++Y+L
Sbjct: 124 CFNS-GVFVFQPSLHTHKLLLQHAMEHGSFDGADQGLLNSFFRNWSTTDIHKHLPFIYNL 182
Query: 243 TSFVTVPTTTAIK 205
+S + A K
Sbjct: 183 SSNTMYTYSPAFK 195
>U94363-1|AAB84378.1| 469|Homo sapiens glycogenin-2 beta protein.
Length = 469
Score = 29.5 bits (63), Expect = 8.1
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -2
Query: 417 CLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSS--HRHLRYLYSL 244
C S + ++Q L + ++ +F + Q SFF N ++ H+HL ++Y+L
Sbjct: 133 CFNS-GVFVFQPSLHTHKLLLQHAMEHGSFDGADQGLLNSFFRNWSTTDIHKHLPFIYNL 191
Query: 243 TSFVTVPTTTAIK 205
+S + A K
Sbjct: 192 SSNTMYTYSPAFK 204
>U94362-1|AAB84377.1| 501|Homo sapiens glycogenin-2 alpha protein.
Length = 501
Score = 29.5 bits (63), Expect = 8.1
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -2
Query: 417 CLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSS--HRHLRYLYSL 244
C S + ++Q L + ++ +F + Q SFF N ++ H+HL ++Y+L
Sbjct: 164 CFNS-GVFVFQPSLHTHKLLLQHAMEHGSFDGADQGLLNSFFRNWSTTDIHKHLPFIYNL 222
Query: 243 TSFVTVPTTTAIK 205
+S + A K
Sbjct: 223 SSNTMYTYSPAFK 235
>U94360-1|AAB84375.1| 342|Homo sapiens glycogenin-2 delta protein.
Length = 342
Score = 29.5 bits (63), Expect = 8.1
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -2
Query: 417 CLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSS--HRHLRYLYSL 244
C S + ++Q L + ++ +F + Q SFF N ++ H+HL ++Y+L
Sbjct: 76 CFNS-GVFVFQPSLHTHKLLLQHAMEHGSFDGADQGLLNSFFRNWSTTDIHKHLPFIYNL 134
Query: 243 TSFVTVPTTTAIK 205
+S + A K
Sbjct: 135 SSNTMYTYSPAFK 147
>U94358-1|AAB84374.1| 298|Homo sapiens glycogenin-2 epsilon
protein.
Length = 298
Score = 29.5 bits (63), Expect = 8.1
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -2
Query: 417 CLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSS--HRHLRYLYSL 244
C S + ++Q L + ++ +F + Q SFF N ++ H+HL ++Y+L
Sbjct: 56 CFNS-GVFVFQPSLHTHKLLLQHAMEHGSFDGADQGLLNSFFRNWSTTDIHKHLPFIYNL 114
Query: 243 TSFVTVPTTTAIK 205
+S + A K
Sbjct: 115 SSNTMYTYSPAFK 127
>DQ424901-1|ABD83666.1| 430|Homo sapiens glycogenin 2 protein.
Length = 430
Score = 29.5 bits (63), Expect = 8.1
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -2
Query: 417 CLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSS--HRHLRYLYSL 244
C S + ++Q L + ++ +F + Q SFF N ++ H+HL ++Y+L
Sbjct: 164 CFNS-GVFVFQPSLHTHKLLLQHAMEHGSFDGADQGLLNSFFRNWSTTDIHKHLPFIYNL 222
Query: 243 TSFVTVPTTTAIK 205
+S + A K
Sbjct: 223 SSNTMYTYSPAFK 235
>BC117263-1|AAI17264.1| 1069|Homo sapiens SLC24A1 protein protein.
Length = 1069
Score = 29.5 bits (63), Expect = 8.1
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 IPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGP 435
+PK T + T K AAG E D PT +T+ ++R+ V+ + P
Sbjct: 114 MPKRTAKMIPTTTKNNYSPTAAGTERRKED-----TPTSSRTLTYYTSTSSRQIVKKYTP 168
Query: 436 AP-GAPRSHTKPYVRTK 483
P G +S++ VR K
Sbjct: 169 TPRGEMKSYSPTQVREK 185
>BC023152-1|AAH23152.1| 470|Homo sapiens glycogenin 2 protein.
Length = 470
Score = 29.5 bits (63), Expect = 8.1
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -2
Query: 417 CLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSS--HRHLRYLYSL 244
C S + ++Q L + ++ +F + Q SFF N ++ H+HL ++Y+L
Sbjct: 133 CFNS-GVFVFQPSLHTHKLLLQHAMEHGSFDGADQGLLNSFFRNWSTTDIHKHLPFIYNL 191
Query: 243 TSFVTVPTTTAIK 205
+S + A K
Sbjct: 192 SSNTMYTYSPAFK 204
>AF179624-1|AAF61855.1| 501|Homo sapiens glycogenin 2 protein.
Length = 501
Score = 29.5 bits (63), Expect = 8.1
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -2
Query: 417 CLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSS--HRHLRYLYSL 244
C S + ++Q L + ++ +F + Q SFF N ++ H+HL ++Y+L
Sbjct: 164 CFNS-GVFVFQPSLHTHKLLLQHAMEHGSFDGADQGLLNSFFRNWSTTDIHKHLPFIYNL 222
Query: 243 TSFVTVPTTTAIK 205
+S + A K
Sbjct: 223 SSNTMYTYSPAFK 235
>AF062922-1|AAC77912.1| 1099|Homo sapiens retinal rod Na-Ca+K
exchanger protein.
Length = 1099
Score = 29.5 bits (63), Expect = 8.1
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 IPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGP 435
+PK T + T K AAG E D PT +T+ ++R+ V+ + P
Sbjct: 114 MPKRTAKMIPTTTKNNYSPTAAGTERRKED-----TPTSSRTLTYYTSTSSRQIVKKYTP 168
Query: 436 AP-GAPRSHTKPYVRTK 483
P G +S++ VR K
Sbjct: 169 TPRGEMKSYSPTQVREK 185
>AF062921-1|AAC16732.1| 1099|Homo sapiens retinal rod Na-Ca+K
exchanger splice variant protein.
Length = 1099
Score = 29.5 bits (63), Expect = 8.1
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 IPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGP 435
+PK T + T K AAG E D PT +T+ ++R+ V+ + P
Sbjct: 114 MPKRTAKMIPTTTKNNYSPTAAGTERRKED-----TPTSSRTLTYYTSTSSRQIVKKYTP 168
Query: 436 AP-GAPRSHTKPYVRTK 483
P G +S++ VR K
Sbjct: 169 TPRGEMKSYSPTQVREK 185
>AF026132-1|AAB97832.1| 1081|Homo sapiens retinal rod Na+/Ca+, K+
exchanger protein.
Length = 1081
Score = 29.5 bits (63), Expect = 8.1
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 IPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGP 435
+PK T + T K AAG E D PT +T+ ++R+ V+ + P
Sbjct: 114 MPKRTAKMIPTTTKNNYSPTAAGTERRKED-----TPTSSRTLTYYTSTSSRQIVKKYTP 168
Query: 436 AP-GAPRSHTKPYVRTK 483
P G +S++ VR K
Sbjct: 169 TPRGEMKSYSPTQVREK 185
>AB014602-1|BAA31677.2| 988|Homo sapiens KIAA0702 protein protein.
Length = 988
Score = 29.5 bits (63), Expect = 8.1
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 IPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGP 435
+PK T + T K AAG E D PT +T+ ++R+ V+ + P
Sbjct: 117 MPKRTAKMIPTTTKNNYSPTAAGTERRKED-----TPTSSRTLTYYTSTSSRQIVKKYTP 171
Query: 436 AP-GAPRSHTKPYVRTK 483
P G +S++ VR K
Sbjct: 172 TPRGEMKSYSPTQVREK 188
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,690,454
Number of Sequences: 237096
Number of extensions: 1792742
Number of successful extensions: 4198
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4196
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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