Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40938
         (677 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.7  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           22   4.7  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           22   4.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.2  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   8.2  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +2

Query: 290 VDTEISRIATTLQPDIPITVEAREADDT 373
           V+  + R+ T   PD+PI ++ ++   T
Sbjct: 768 VEAILKRVQTPFDPDVPIELQIQKQSHT 795


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 434 TAVSPPPLRRR 466
           T VSPPP +RR
Sbjct: 900 TVVSPPPTKRR 910


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 434 TAVSPPPLRRR 466
           T VSPPP +RR
Sbjct: 938 TVVSPPPTKRR 948


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 164 VTNSDTIRGDGEA 202
           V+NSD +RG+G A
Sbjct: 23  VSNSDRVRGNGNA 35


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 164 VTNSDTIRGDGEA 202
           V+NSD +RG+G A
Sbjct: 24  VSNSDRVRGNGNA 36


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +3

Query: 12  RTISIEYTVKKIRMSYAEINAPLNAKQRATLWGQTVDHVIYWRPPQ 149
           RT++  ++ K +     E    + A+Q+     Q   HVI  + PQ
Sbjct: 396 RTLNTLHSEKLLAFKMTEQQQQMQAQQQHQQQQQQTQHVINAQQPQ 441


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 608 NMTMILREMRFKYFQILN 661
           N T+I   +RFK F +LN
Sbjct: 131 NSTIIFLLIRFKSFSLLN 148


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,324
Number of Sequences: 438
Number of extensions: 3570
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)