Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40935
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0233 + 26599068-26599466,26601214-26601829,26601871-266019... 87 9e-18
02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309 63 2e-10
11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733 62 4e-10
05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887 55 4e-08
02_02_0134 + 7082462-7082627,7084199-7084325,7084404-7084611,708... 44 1e-04
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 42 4e-04
03_02_0646 + 10141967-10142476,10143721-10144254 40 0.002
07_01_1210 - 11538233-11538349,11538532-11538612,11538697-115387... 39 0.004
04_04_0048 + 22351788-22352177,22353175-22353711 39 0.004
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 38 0.005
03_05_1041 - 29884975-29885107,29885485-29885552,29885652-298858... 38 0.005
01_07_0386 + 43218686-43218745,43218972-43219190,43219307-432193... 38 0.005
01_05_0099 - 18098169-18098390,18098878-18098972,18099063-180991... 37 0.016
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 36 0.021
11_04_0086 + 13362788-13362937,13363887-13363970,13364233-133642... 35 0.049
11_08_0097 + 28330565-28330645,28330768-28330986,28331066-283311... 33 0.20
09_04_0628 + 19093665-19094033,19094408-19094722 33 0.26
01_05_0410 + 21914995-21915168,21915268-21915353,21915446-219156... 33 0.26
01_01_1139 - 9024609-9024708,9024832-9024910,9025083-9025252,902... 33 0.26
08_02_1016 - 23606089-23607072 32 0.35
03_02_0681 + 10358224-10359006,10359162-10359272,10360445-10360648 32 0.35
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 31 0.61
12_02_0618 - 21262021-21262117,21262429-21262466,21262933-212629... 31 1.1
09_04_0437 - 17587944-17588909 31 1.1
01_06_0447 + 29452194-29452361,29453232-29453317,29453403-294536... 30 1.9
10_08_1015 - 22255135-22255693,22256437-22256836,22257938-222583... 29 4.3
>05_06_0233 +
26599068-26599466,26601214-26601829,26601871-26601917,
26602101-26602268
Length = 409
Score = 87.4 bits (207), Expect = 9e-18
Identities = 41/83 (49%), Positives = 57/83 (68%)
Frame = +3
Query: 6 YDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNT 185
+DTA+ ++ P ++P+ W AQ VT++AG+ISYP DTVRRRMMMQSG +Y +T
Sbjct: 236 FDTAKDVMV-PLDSPLWQRWVTAQAVTSMAGLISYPLDTVRRRMMMQSGMDVQ--MYSST 292
Query: 186 IHCWATIAKTEGTSAFFKGAFSN 254
+ CW I K EG +F++GA SN
Sbjct: 293 LDCWRKIYKVEGIKSFYRGALSN 315
>02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309
Length = 382
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/65 (47%), Positives = 43/65 (66%)
Frame = +3
Query: 60 SWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFK 239
S+A+ +T AG+ SYP DTVRRRMMM SG A + YK+++ ++ I K EG + FK
Sbjct: 290 SFALGWLITNGAGLASYPIDTVRRRMMMTSGEA---VKYKSSMDAFSQILKNEGAKSLFK 346
Query: 240 GAFSN 254
GA +N
Sbjct: 347 GAGAN 351
>11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733
Length = 329
Score = 62.1 bits (144), Expect = 4e-10
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 YDTARGM-LPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKN 182
YDT + + L P S+A+ +TT +G +YPFDT+RRRMM+ SG+ + YKN
Sbjct: 212 YDTMKPLILVGPLQENFFASFALGWAITTFSGACAYPFDTLRRRMMLTSGQ---PLKYKN 268
Query: 183 TIHCWATIAKTEGTSAFFKGAFSN 254
H I TEG F+G +N
Sbjct: 269 AFHAAKQIVSTEGFFTLFRGVGAN 292
>05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887
Length = 380
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/65 (43%), Positives = 39/65 (60%)
Frame = +3
Query: 60 SWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFK 239
S+ + +T AG+ SYP DTVRRRMMM SG A + Y +++ + I EG + FK
Sbjct: 288 SFLLGWGITIGAGLASYPIDTVRRRMMMTSGEA---VKYNSSLDAFKQIVAKEGAKSLFK 344
Query: 240 GAFSN 254
GA +N
Sbjct: 345 GAGAN 349
>02_02_0134 +
7082462-7082627,7084199-7084325,7084404-7084611,
7084864-7084990,7085071-7085255,7085332-7085454,
7085777-7085836,7085980-7086117
Length = 377
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/84 (29%), Positives = 38/84 (45%)
Frame = +3
Query: 3 FYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKN 182
FY+T + +P+ I+ A + I+YP D VRR+M +Q+ + + K
Sbjct: 226 FYETMKTYVPEEHRKDIIAKLACGSVAGLLGQTITYPLDVVRRQMQVQAFSSSNLEKGKG 285
Query: 183 TIHCWATIAKTEGTSAFFKGAFSN 254
T A IAK +G F G N
Sbjct: 286 TFGSIAMIAKHQGWRQLFSGLSIN 309
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +3
Query: 6 YDTARG--MLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYK 179
Y+T R + P ++P++IS A + I++P D VRRRM ++ ++ +
Sbjct: 220 YETLRSHWQIERPYDSPVLISLACGSLSGIASSTITFPLDLVRRRMQLEGAAGRARVYQT 279
Query: 180 NTIHCWATIAKTEGTSAFFKGAFSNSSEVL 269
+ I +TE ++G +V+
Sbjct: 280 GLFGTFGHIVRTESLRGLYRGILPEYCKVV 309
>03_02_0646 + 10141967-10142476,10143721-10144254
Length = 347
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/52 (44%), Positives = 28/52 (53%)
Frame = +3
Query: 87 TVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 242
T I + PFD V+ R+M Q GR DI YK +H TI EG A +KG
Sbjct: 262 TAGPICTGPFDVVKTRLMAQ-GRT-GDIKYKGMVHAIRTIYTEEGLRALWKG 311
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 123 VRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGA 245
V+ R+ Q G + + YK IHC TI EG + GA
Sbjct: 172 VKIRLQQQKGLSPDLLRYKGPIHCARTIVTEEGLFGLWAGA 212
Score = 31.1 bits (67), Expect = 0.80
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 111 PFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 242
P D ++ R+ + A Y+ HC T+ ++EG A +KG
Sbjct: 59 PIDVIKTRLQLDRSGA-----YRGIAHCGTTVVRSEGVRALWKG 97
>07_01_1210 -
11538233-11538349,11538532-11538612,11538697-11538758,
11539108-11539159,11539779-11539868,11539957-11540052,
11540127-11540180,11540314-11540404,11540731-11540807,
11541089-11541171,11541441-11541492
Length = 284
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +3
Query: 90 VAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 242
+ G I+ P D ++ R+M+Q G+A Y+ I C TI + EG AF KG
Sbjct: 201 ITGAITTPLDVLKTRLMVQ-GQANQ---YRGIISCAQTILREEGAGAFLKG 247
>04_04_0048 + 22351788-22352177,22353175-22353711
Length = 308
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +3
Query: 93 AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 242
A +S P D ++ RMM Q AK +LY+N+ C K EG +A +KG
Sbjct: 230 ATTLSCPADVIKTRMMNQGKDAK--VLYRNSYDCLVKTVKHEGLTALWKG 277
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 9/70 (12%)
Frame = +3
Query: 87 TVAGIISYPFDTVRRRMMM---------QSGRAKSDILYKNTIHCWATIAKTEGTSAFFK 239
T+ ++YP D +RRRM M +G K + Y I + + EG A +K
Sbjct: 261 TIGQTVAYPLDVIRRRMQMVGWNNAASIVTGEGKEALQYNGMIDAFRKTVRYEGVGALYK 320
Query: 240 GAFSNSSEVL 269
G NS +V+
Sbjct: 321 GLVPNSVKVV 330
>03_05_1041 -
29884975-29885107,29885485-29885552,29885652-29885816,
29886262-29886372,29886999-29887072,29887387-29887480,
29887750-29887849,29888075-29888151,29888856-29888935,
29889025-29889157
Length = 344
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 108 YPFDTVRRRMMMQSGRAKSDIL-YKNTIHCWATIAKTEGTSAFFKGAF 248
+P D VR R + GR D+ Y+NT H TIA++EG + G +
Sbjct: 34 HPLDVVRTRFQVSGGRGCYDLPPYRNTAHAVYTIARSEGLRGLYAGFY 81
>01_07_0386 +
43218686-43218745,43218972-43219190,43219307-43219391,
43219583-43219713,43219802-43219900,43219984-43220088,
43220190-43220264,43222006-43222092,43222129-43222173
Length = 301
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +3
Query: 102 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSN 254
I P D V+ RMM D YK+T+ C+A K +G AF+KG +N
Sbjct: 227 IGSPVDVVKSRMM-------GDATYKSTLDCFAKTLKNDGLPAFYKGFIAN 270
>01_05_0099 -
18098169-18098390,18098878-18098972,18099063-18099131,
18099277-18099352,18101412-18101524,18104137-18104185,
18104540-18104572,18105446-18105552,18106892-18106990,
18107122-18107203
Length = 314
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 93 AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSN 254
A II+YP + VR ++ Q + Y I C + + EG F++G +N
Sbjct: 233 ASIITYPHEVVRSKLQEQGRARHGAVHYTGVIDCIKQVYQKEGIPGFYRGCATN 286
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 36.3 bits (80), Expect = 0.021
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 93 AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 242
A ++YP D VR R+ Q K+ YK H +TI + EG +KG
Sbjct: 126 AASVTYPLDVVRTRLATQ----KTTRYYKGIFHAVSTICRDEGVKGLYKG 171
Score = 35.9 bits (79), Expect = 0.028
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +3
Query: 36 PKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKT 215
P+++P V+S + ++P D V+RRM +Q S + + I +
Sbjct: 202 PQDSPAVVSLFSGSLSGIASSTATFPLDLVKRRMQLQGAAGTSSVCKSSITGTIRQIFQK 261
Query: 216 EGTSAFFKG 242
EG F++G
Sbjct: 262 EGLRGFYRG 270
>11_04_0086 +
13362788-13362937,13363887-13363970,13364233-13364294,
13365146-13365507,13365928-13366142,13366236-13366292
Length = 309
Score = 35.1 bits (77), Expect = 0.049
Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Frame = +3
Query: 33 DPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGR-AKSDILYKNTIHCWATIA 209
D K P+V I T + + P D RM S A YKN H IA
Sbjct: 110 DGKPLPLVQKAGIGLTAGAIGACVGSPADLALIRMQADSTLPAAQSRNYKNAFHALYRIA 169
Query: 210 KTEGTSAFFKGA 245
EG A +KGA
Sbjct: 170 ADEGVLALWKGA 181
>11_08_0097 +
28330565-28330645,28330768-28330986,28331066-28331144,
28331222-28331355,28331447-28331545,28331638-28331742,
28332377-28332451,28333671-28333757,28333854-28333889
Length = 304
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 102 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSN 254
+ P D V+ RMM D Y +TI C+ K +G AF+KG N
Sbjct: 233 VGSPVDVVKSRMM-------GDSAYTSTIDCFVKTLKNDGPLAFYKGFLPN 276
Score = 32.3 bits (70), Expect = 0.35
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 93 AGIISYPFDTVRRRMMMQSG-RAKSDILYKNTIHCWATIAKTEGTSAFFKG 242
A + + P DT + R+ +Q A + Y+ + ATIA+ EG +A +KG
Sbjct: 26 AEVCTIPLDTAKVRLQLQKNVAADAAPKYRGLLGTAATIAREEGAAALWKG 76
>09_04_0628 + 19093665-19094033,19094408-19094722
Length = 227
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 185 GVLVQDIALGTTRLHHHAPTDCVEGIGDDTGDCGYG 78
G V+ +ALG LHHHAP D ++ G D + G
Sbjct: 8 GGAVEGLALGIAPLHHHAPCDDLKDDGGDAEEAEDG 43
>01_05_0410 +
21914995-21915168,21915268-21915353,21915446-21915656,
21915869-21915998,21916740-21916924,21917014-21917145,
21917329-21917433
Length = 340
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Frame = +3
Query: 6 YDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGR---AKSDILY 176
Y+ + +P+ +V+ + ++YP D VRR+M +Q+ + A
Sbjct: 218 YEDLKSRVPEDYKRSVVLKLSCGALAGLFGQTLTYPLDVVRRQMQVQNKQPHNANDAFRI 277
Query: 177 KNTIHCWATIAKTEGTSAFFKGAFSNSSEVL 269
+ T A I + +G F G N +V+
Sbjct: 278 RGTFQGLALIIRCQGWRQLFAGLSLNYVKVV 308
>01_01_1139 -
9024609-9024708,9024832-9024910,9025083-9025252,
9025339-9025451,9025518-9025586,9025867-9025944,
9026022-9026084,9026590-9026670,9027166-9027222,
9027352-9027705
Length = 387
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = +3
Query: 6 YDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNT 185
+D + +P+ + S A A T A ++ YP DTVRR+M M+ Y
Sbjct: 270 FDLMKKSVPEKYKSRPETSLATALLSATFATLMCYPLDTVRRQMQMKGSP------YNTV 323
Query: 186 IHCWATIAKTEGTSAFFKGAFSNS 257
+ I + +G ++G N+
Sbjct: 324 LDAIPGIVERDGLIGLYRGFVPNA 347
>08_02_1016 - 23606089-23607072
Length = 327
Score = 32.3 bits (70), Expect = 0.35
Identities = 23/75 (30%), Positives = 31/75 (41%)
Frame = +3
Query: 18 RGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCW 197
RG D T +V S+A VA S P D V+ R+M + Y I C
Sbjct: 226 RGPGADGLGTHVVASFAAG----LVAAAASNPVDVVKTRVMNMKVAPGAPPPYSGAIDCA 281
Query: 198 ATIAKTEGTSAFFKG 242
++EG A +KG
Sbjct: 282 LKTVRSEGVMALYKG 296
>03_02_0681 + 10358224-10359006,10359162-10359272,10360445-10360648
Length = 365
Score = 32.3 bits (70), Expect = 0.35
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +3
Query: 6 YDTARGMLPDPKNTPIVISWAIAQTVTTVAG-IISYPFDTVRRRMMMQSGRAKSDILYKN 182
Y+ A+ L + + A + + T+A + P DTV++R+ + S Y
Sbjct: 121 YEFAKSRLSERLGPNNPAAHAASGVLATIASDAVFTPMDTVKQRLQLTSSP------YTG 174
Query: 183 TIHCWATIAKTEGTSAFF 236
HC T+ + EG AFF
Sbjct: 175 VSHCVRTVLRDEGLGAFF 192
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +3
Query: 69 IAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 242
I ++ ++P + R++M Q G +YKN H I + EG +KG
Sbjct: 330 IGSAAGAISSTATFPLEVARKQM--QVGAVGGRQVYKNVFHALYCIMENEGIGGLYKG 385
>12_02_0618 -
21262021-21262117,21262429-21262466,21262933-21262986,
21263274-21263438,21263523-21263759,21263857-21263918,
21264543-21264656,21264816-21264942,21266200-21266218,
21266338-21266428,21266932-21267094,21267182-21267330,
21268147-21268287,21268368-21268533,21268568-21268631,
21268729-21269084,21269759-21269977,21270328-21270433,
21270713-21270942
Length = 865
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 171 LYKNTIHCWATIAKTEGTSAFFKGAFS 251
+Y+N HC + TEG ++ +KG F+
Sbjct: 811 VYRNGFHCGYQVVVTEGVTSLYKGGFA 837
>09_04_0437 - 17587944-17588909
Length = 321
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +3
Query: 90 VAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 242
VA S P D V+ R+M A + Y + C ++EG A +KG
Sbjct: 240 VAASASTPVDVVKTRVMNMKVVAGAPPPYSGALDCLIKTVRSEGAMALYKG 290
>01_06_0447 +
29452194-29452361,29453232-29453317,29453403-29453610,
29454252-29454381,29454561-29454745,29454858-29454989,
29455747-29455851
Length = 337
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 3/91 (3%)
Frame = +3
Query: 6 YDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDI---LY 176
Y+ + +P+ + + + ++YP D VRR+M +QS +
Sbjct: 215 YEGLKAHVPEDYKNSVTLKLSCGAAAGLFGQTLTYPLDVVRRQMQVQSQQYHDKFGGPQI 274
Query: 177 KNTIHCWATIAKTEGTSAFFKGAFSNSSEVL 269
+ T I +T+G F G N +V+
Sbjct: 275 RGTFQGLMIIKQTQGWRQLFAGLSLNYIKVV 305
>10_08_1015 -
22255135-22255693,22256437-22256836,22257938-22258371,
22259586-22259977
Length = 594
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +3
Query: 54 VISWAIAQTVTTVAG-IISYPFDTVRRRMMMQSGRAKSDI-LYKNTIHCWATIAKTEGTS 227
V+ +A TV A I+ +PFDT++ ++ Q A Y + TEG
Sbjct: 4 VVKDLVAGTVGGAANLIVGHPFDTIKVKLQSQPTPAPGQFPKYAGAVDAVKQTIATEGPR 63
Query: 228 AFFKG 242
+KG
Sbjct: 64 GLYKG 68
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,782,576
Number of Sequences: 37544
Number of extensions: 244512
Number of successful extensions: 648
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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