Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40931
         (699 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    56   2e-10
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    25   0.91 
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   2.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   3.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   6.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.5  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   8.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.5  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 56.4 bits (130), Expect = 2e-10
 Identities = 22/34 (64%), Positives = 29/34 (85%)
 Frame = +2

Query: 236 SVDLHSLGAVMFVIAFLGCCGAIRESHCMVVTYA 337
           S+ L  LG+++FVI+F GCCGAIRESHCM +T+A
Sbjct: 52  SITLIVLGSIIFVISFFGCCGAIRESHCMTITFA 85



 Score = 25.8 bits (54), Expect = 0.40
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 499 IATKFECCGNTGAINYGQFTLPESCC 576
           I    +CCG     +Y    +P SCC
Sbjct: 139 IQKNLQCCGVHSLSDYNDKPIPASCC 164


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 446 KKRSDANADEAAEAVFSELQRSSN 517
           +KR DA  DE+ EA+F  + R  N
Sbjct: 292 EKRDDAK-DESVEAIFQSILRQKN 314


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 410 KESIMDGVGVLFKKRSDANADEAAEAVFSELQRS 511
           K S+M   G+  +     + DE    VFS LQR+
Sbjct: 96  KRSLMGAQGLSIRGLQINHEDETIRPVFSTLQRA 129


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -1

Query: 690 GLFPFSGRARRSLGPQPGIRGVDR 619
           GLFP   +   S GP    RGV R
Sbjct: 61  GLFPVHEKGGASCGPNVYNRGVQR 84


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = +3

Query: 543 LRSVHVARVLLRQEEHPLYLRRQQLHGRRRESRAAVPKIGELYQ 674
           L +V +  + + Q      L    L+GR +  +   P +GE+ Q
Sbjct: 581 LEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPTVGEISQ 624


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 120 IAHISQNSFHIPC*EHYFLFLFHN 49
           I + S +SF+IPC     +FL++N
Sbjct: 344 IIYSSLSSFYIPC--IIMVFLYYN 365


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
            protein.
          Length = 1124

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 373  DQRPPLHLRREHQGEHYGWRRR 438
            DQ+P  +L  +   + YG RR+
Sbjct: 974  DQKPTEYLLEDSMKQQYGKRRK 995


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 316 LHGRHVRNLLAGDHHCAS 369
           LH   ++N+   DHH AS
Sbjct: 349 LHSFQMKNVTIVDHHTAS 366


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 1/19 (5%)
 Frame = -3

Query: 373 HHLHNDDHQ-QEDCVRDDH 320
           HHL N  H  Q   V+D H
Sbjct: 142 HHLQNHHHHLQSTAVQDHH 160


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,469
Number of Sequences: 438
Number of extensions: 3538
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)