Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40910
         (795 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC019306-1|AAH19306.1|  275|Homo sapiens GIY-YIG domain containi...   123   6e-28
BC015990-1|AAH15990.1|  275|Homo sapiens GIY-YIG domain containi...   123   6e-28
BC000803-1|AAH00803.1|  275|Homo sapiens GIY-YIG domain containi...   123   6e-28
BC000754-1|AAH00754.1|  275|Homo sapiens GIY-YIG domain containi...   123   6e-28
AK027092-1|BAB15654.1|  255|Homo sapiens protein ( Homo sapiens ...   113   7e-25
BC130547-1|AAI30548.1|  161|Homo sapiens GIY-YIG domain containi...    99   2e-20
BC130545-1|AAI30546.1|  161|Homo sapiens GIY-YIG domain containi...    99   2e-20
BC069007-1|AAH69007.1|  161|Homo sapiens GIY-YIG domain containi...    99   2e-20

>BC019306-1|AAH19306.1|  275|Homo sapiens GIY-YIG domain containing
           2 protein.
          Length = 275

 Score =  123 bits (297), Expect = 6e-28
 Identities = 49/86 (56%), Positives = 66/86 (76%)
 Frame = +3

Query: 231 RFLWRVSVYCLNPKYKGRTYIGYTREPNRRIMQHNRGTWAGGAYRTSNKGPWKMVLIVHG 410
           RF     +YCLNP+Y+GR Y+G+T    RR+ QHN G   GGA+RTS +GPW+MVL+VHG
Sbjct: 12  RFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHG 71

Query: 411 FPNNISALRFEWAWQNPTKTTRLQHL 488
           FP++++ALRFEWAWQ+P  + RL H+
Sbjct: 72  FPSSVAALRFEWAWQHPHASRRLAHV 97



 Score = 54.4 bits (125), Expect = 4e-07
 Identities = 23/54 (42%), Positives = 34/54 (62%)
 Frame = +2

Query: 512 ESEFQFKLRVLSEMLRVGPWCRLPLLIRWLEKEYFEEFPVTRKPPEHMKICYGP 673
           E+ F F LRVL+ MLR  PW RLPL +RW+  +  ++  +   PP H+ + +GP
Sbjct: 104 ETAFAFHLRVLAHMLRAPPWARLPLTLRWVRPDLRQD--LCLPPPPHVPLAFGP 155


>BC015990-1|AAH15990.1|  275|Homo sapiens GIY-YIG domain containing
           2 protein.
          Length = 275

 Score =  123 bits (297), Expect = 6e-28
 Identities = 49/86 (56%), Positives = 66/86 (76%)
 Frame = +3

Query: 231 RFLWRVSVYCLNPKYKGRTYIGYTREPNRRIMQHNRGTWAGGAYRTSNKGPWKMVLIVHG 410
           RF     +YCLNP+Y+GR Y+G+T    RR+ QHN G   GGA+RTS +GPW+MVL+VHG
Sbjct: 12  RFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHG 71

Query: 411 FPNNISALRFEWAWQNPTKTTRLQHL 488
           FP++++ALRFEWAWQ+P  + RL H+
Sbjct: 72  FPSSVAALRFEWAWQHPHASRRLAHV 97



 Score = 54.4 bits (125), Expect = 4e-07
 Identities = 23/54 (42%), Positives = 34/54 (62%)
 Frame = +2

Query: 512 ESEFQFKLRVLSEMLRVGPWCRLPLLIRWLEKEYFEEFPVTRKPPEHMKICYGP 673
           E+ F F LRVL+ MLR  PW RLPL +RW+  +  ++  +   PP H+ + +GP
Sbjct: 104 ETAFAFHLRVLAHMLRAPPWARLPLTLRWVRPDLRQD--LCLPPPPHVPLAFGP 155


>BC000803-1|AAH00803.1|  275|Homo sapiens GIY-YIG domain containing
           2 protein.
          Length = 275

 Score =  123 bits (297), Expect = 6e-28
 Identities = 49/86 (56%), Positives = 66/86 (76%)
 Frame = +3

Query: 231 RFLWRVSVYCLNPKYKGRTYIGYTREPNRRIMQHNRGTWAGGAYRTSNKGPWKMVLIVHG 410
           RF     +YCLNP+Y+GR Y+G+T    RR+ QHN G   GGA+RTS +GPW+MVL+VHG
Sbjct: 12  RFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHG 71

Query: 411 FPNNISALRFEWAWQNPTKTTRLQHL 488
           FP++++ALRFEWAWQ+P  + RL H+
Sbjct: 72  FPSSVAALRFEWAWQHPHASRRLAHV 97



 Score = 54.4 bits (125), Expect = 4e-07
 Identities = 23/54 (42%), Positives = 34/54 (62%)
 Frame = +2

Query: 512 ESEFQFKLRVLSEMLRVGPWCRLPLLIRWLEKEYFEEFPVTRKPPEHMKICYGP 673
           E+ F F LRVL+ MLR  PW RLPL +RW+  +  ++  +   PP H+ + +GP
Sbjct: 104 ETAFAFHLRVLAHMLRAPPWARLPLTLRWVRPDLRQD--LCLPPPPHVPLAFGP 155


>BC000754-1|AAH00754.1|  275|Homo sapiens GIY-YIG domain containing
           2 protein.
          Length = 275

 Score =  123 bits (297), Expect = 6e-28
 Identities = 49/86 (56%), Positives = 66/86 (76%)
 Frame = +3

Query: 231 RFLWRVSVYCLNPKYKGRTYIGYTREPNRRIMQHNRGTWAGGAYRTSNKGPWKMVLIVHG 410
           RF     +YCLNP+Y+GR Y+G+T    RR+ QHN G   GGA+RTS +GPW+MVL+VHG
Sbjct: 12  RFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHG 71

Query: 411 FPNNISALRFEWAWQNPTKTTRLQHL 488
           FP++++ALRFEWAWQ+P  + RL H+
Sbjct: 72  FPSSVAALRFEWAWQHPHASRRLAHV 97



 Score = 54.4 bits (125), Expect = 4e-07
 Identities = 23/54 (42%), Positives = 34/54 (62%)
 Frame = +2

Query: 512 ESEFQFKLRVLSEMLRVGPWCRLPLLIRWLEKEYFEEFPVTRKPPEHMKICYGP 673
           E+ F F LRVL+ MLR  PW RLPL +RW+  +  ++  +   PP H+ + +GP
Sbjct: 104 ETAFAFHLRVLAHMLRAPPWARLPLTLRWVRPDLRQD--LCLPPPPHVPLAFGP 155


>AK027092-1|BAB15654.1|  255|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23439 fis, clone HSI00184. ).
          Length = 255

 Score =  113 bits (272), Expect = 7e-25
 Identities = 47/86 (54%), Positives = 64/86 (74%)
 Frame = +3

Query: 231 RFLWRVSVYCLNPKYKGRTYIGYTREPNRRIMQHNRGTWAGGAYRTSNKGPWKMVLIVHG 410
           RF     +Y LNP+Y+GR Y+G+T    RR+ QHN G   GGA+RTS +GP +MVL+VHG
Sbjct: 12  RFFGVYLLYWLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPREMVLVVHG 71

Query: 411 FPNNISALRFEWAWQNPTKTTRLQHL 488
           FP++++ALRFEWAWQ+P  + RL H+
Sbjct: 72  FPSSVAALRFEWAWQHPHASRRLAHV 97



 Score = 54.4 bits (125), Expect = 4e-07
 Identities = 23/54 (42%), Positives = 34/54 (62%)
 Frame = +2

Query: 512 ESEFQFKLRVLSEMLRVGPWCRLPLLIRWLEKEYFEEFPVTRKPPEHMKICYGP 673
           E+ F F LRVL+ MLR  PW RLPL +RW+  +  ++  +   PP H+ + +GP
Sbjct: 104 ETAFAFHLRVLAHMLRAPPWARLPLTLRWVRPDLRQD--LCLPPPPHVPLAFGP 155


>BC130547-1|AAI30548.1|  161|Homo sapiens GIY-YIG domain containing
           2 protein.
          Length = 161

 Score = 98.7 bits (235), Expect = 2e-20
 Identities = 40/71 (56%), Positives = 54/71 (76%)
 Frame = +3

Query: 231 RFLWRVSVYCLNPKYKGRTYIGYTREPNRRIMQHNRGTWAGGAYRTSNKGPWKMVLIVHG 410
           RF     +YCLNP+Y+GR Y+G+T    RR+ QHN G   GGA+RTS +GPW+MVL+VHG
Sbjct: 12  RFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHG 71

Query: 411 FPNNISALRFE 443
           FP++++ALR E
Sbjct: 72  FPSSVAALRDE 82


>BC130545-1|AAI30546.1|  161|Homo sapiens GIY-YIG domain containing
           2 protein.
          Length = 161

 Score = 98.7 bits (235), Expect = 2e-20
 Identities = 40/71 (56%), Positives = 54/71 (76%)
 Frame = +3

Query: 231 RFLWRVSVYCLNPKYKGRTYIGYTREPNRRIMQHNRGTWAGGAYRTSNKGPWKMVLIVHG 410
           RF     +YCLNP+Y+GR Y+G+T    RR+ QHN G   GGA+RTS +GPW+MVL+VHG
Sbjct: 12  RFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHG 71

Query: 411 FPNNISALRFE 443
           FP++++ALR E
Sbjct: 72  FPSSVAALRDE 82


>BC069007-1|AAH69007.1|  161|Homo sapiens GIY-YIG domain containing
           2 protein.
          Length = 161

 Score = 98.7 bits (235), Expect = 2e-20
 Identities = 40/71 (56%), Positives = 54/71 (76%)
 Frame = +3

Query: 231 RFLWRVSVYCLNPKYKGRTYIGYTREPNRRIMQHNRGTWAGGAYRTSNKGPWKMVLIVHG 410
           RF     +YCLNP+Y+GR Y+G+T    RR+ QHN G   GGA+RTS +GPW+MVL+VHG
Sbjct: 12  RFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHG 71

Query: 411 FPNNISALRFE 443
           FP++++ALR E
Sbjct: 72  FPSSVAALRDE 82


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,036,547
Number of Sequences: 237096
Number of extensions: 2613360
Number of successful extensions: 4477
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4468
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)