Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40910
         (795 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    25   0.61 
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    23   3.3  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   4.3  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   5.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   5.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   5.7  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   7.5  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   10.0 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   10.0 

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +3

Query: 90  TKIILTNINALSSYRF 137
           TKI +T +NA+++YRF
Sbjct: 375 TKITITGLNAVTTYRF 390


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = -3

Query: 115 FIFVSIILVTTYY 77
           F F+S+IL+T+Y+
Sbjct: 9   FFFLSVILITSYF 21


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +2

Query: 89  NQNNTNKYK 115
           N NNTNKYK
Sbjct: 138 NNNNTNKYK 146


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +2

Query: 503 TSQESEFQFKLRVLSEMLRVGPWCRLPLLIRWLEKEYFEEFPVTRKP 643
           +++E+E +    + S+   VG W   P + R L++ Y     +  KP
Sbjct: 179 SARENELRALSSLFSKGCLVGTWSPDPAINRRLKETYSNMCALCEKP 225


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +2

Query: 503 TSQESEFQFKLRVLSEMLRVGPWCRLPLLIRWLEKEYFEEFPVTRKP 643
           +++E+E +    + S+   VG W   P + R L++ Y     +  KP
Sbjct: 179 SARENELRALSSLFSKGCLVGTWSPDPAINRRLKETYSNMCALCEKP 225


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +2

Query: 503 TSQESEFQFKLRVLSEMLRVGPWCRLPLLIRWLEKEYFEEFPVTRKP 643
           +++E+E +    + S+   VG W   P + R L++ Y     +  KP
Sbjct: 179 SARENELRALSSLFSKGCLVGTWSPDPAINRRLKETYSNMCALCEKP 225


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 390 MVLIVHGFPNNISALRFEWAW 452
           ++L+V G PN +S    ++ W
Sbjct: 87  LILLVLGLPNELSLFWQQYPW 107


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 321 FAGSAPGYILYT 286
           F  S PGY LYT
Sbjct: 72  FVTSEPGYFLYT 83


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = -1

Query: 273 ISDSNSKQIHAKEIFNYF--WLCHF 205
           I +S  KQ+   EI+N+F    C+F
Sbjct: 517 IIESPDKQLTLNEIYNWFQNTFCYF 541


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,409
Number of Sequences: 438
Number of extensions: 5210
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)