Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40893
         (679 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    24   1.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   3.5  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   6.2  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   6.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.2  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 414 HHFQECPQHEGDEIQCITSRACRC 485
           HH    P+  G +++ I   AC C
Sbjct: 464 HHHPHPPETPGPQVETILQNACFC 487


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 133 SPTDDVREQDGADLRQGSFLRLWT 204
           SP +D   +  +D R+GS  R W+
Sbjct: 194 SPPNDEGIETDSDRRKGSIARCWS 217


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 213 LARLLPDKKLASWDKLYTWK 272
           LA L P  KL  W++   W+
Sbjct: 91  LAALYPPNKLQQWNEDLNWQ 110


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 213 LARLLPDKKLASWDKLYTWK 272
           LA L P  KL  W++   W+
Sbjct: 106 LAALYPPNKLQQWNEDLNWQ 125


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = -1

Query: 658  QAWSSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGSDLARRLRPSTSLGDQQG 497
            Q ++++ S   +   +SPA +   SP +SL+  T+  +    +  S S+  Q+G
Sbjct: 909  QGFATAASSPGLLERASPAFSGTSSPTNSLVGKTVAVNFRDVIAKSISVKFQEG 962


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,947
Number of Sequences: 438
Number of extensions: 4394
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)