Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40874
         (686 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    31   0.014
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    31   0.014
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    31   0.014
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   2.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   4.8  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   8.3  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 30.7 bits (66), Expect = 0.014
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 362 FHKLEKQLVEWSEKGMTVPEKVFYMY 439
           + KL+K+L EW+ K +T P   +Y+Y
Sbjct: 153 YDKLKKKLEEWTGKNITTPWDYYYIY 178


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 30.7 bits (66), Expect = 0.014
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 362 FHKLEKQLVEWSEKGMTVPEKVFYMY 439
           + KL+K+L EW+ K +T P   +Y+Y
Sbjct: 168 YDKLKKKLEEWTGKNITTPWDYYYIY 193


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 30.7 bits (66), Expect = 0.014
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 362 FHKLEKQLVEWSEKGMTVPEKVFYMY 439
           + KL+K+L EW+ K +T P   +Y+Y
Sbjct: 56  YDKLKKKLEEWTGKNITTPWDYYYIY 81


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 380 QLVEWSEKGMTVPEKVFYMY 439
           +L +W + G TV +KV Y+Y
Sbjct: 228 KLSQWRKDGGTVKKKVNYVY 247


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +2

Query: 125  RWRRVQDVSSHSGQAGIGTRNCQRDGSALAQTVSEAVADAC*RRDVLAQESELVNL 292
            +++ V    + SGQ+ I     Q+  S  AQTV    A    +  VLA  ++ V +
Sbjct: 1161 QYQVVSQAQTSSGQSKIIASTQQQQQSQQAQTVRMVTAQLAGKPIVLASGNKNVGV 1216


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +1

Query: 298 NSRVR-RYLRQRSDQRTGTSLTLP 366
           N RV  R+ RQR D+    +LTLP
Sbjct: 355 NHRVASRFGRQRGDEIVMLTLTLP 378


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,754
Number of Sequences: 438
Number of extensions: 3375
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)