Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40870
(859 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L39793-1|AAA82869.1| 876|Homo sapiens nuclear factor p97 protein. 124 4e-28
L38951-1|AAC41763.1| 876|Homo sapiens importin beta subunit pro... 124 4e-28
BT009797-1|AAP88799.1| 876|Homo sapiens karyopherin (importin) ... 124 4e-28
BC036703-1|AAH36703.1| 876|Homo sapiens karyopherin (importin) ... 124 4e-28
BC024045-1|AAH24045.1| 876|Homo sapiens karyopherin (importin) ... 124 4e-28
BC003572-1|AAH03572.1| 876|Homo sapiens karyopherin (importin) ... 124 4e-28
U72395-1|AAB68948.1| 890|Homo sapiens MIP protein. 50 1e-05
U72069-1|AAB58254.1| 890|Homo sapiens karyopherin beta2 protein. 50 1e-05
U70322-1|AAC50723.1| 890|Homo sapiens transportin protein. 50 1e-05
BC040340-1|AAH40340.1| 890|Homo sapiens transportin 1 protein. 50 1e-05
BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin... 49 2e-05
BC018314-1|AAH18314.1| 771|Homo sapiens Unknown (protein for IM... 49 2e-05
AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homo... 49 2e-05
AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein p... 49 2e-05
AF019039-1|AAB83973.1| 896|Homo sapiens transportin2 protein. 48 6e-05
J02902-1|AAA36399.1| 589|Homo sapiens phosphatase 2A regulatory... 34 0.76
BC047409-1|AAH47409.1| 539|Homo sapiens karyopherin alpha 5 (im... 32 2.3
AL132795-5|CAI20500.1| 539|Homo sapiens karyopherin alpha 5 (im... 32 2.3
AF005361-1|AAC51868.1| 536|Homo sapiens importin alpha 6 protein. 32 2.3
BC130496-1|AAI30497.1| 110|Homo sapiens CHM protein protein. 31 4.1
BC130494-1|AAI30495.1| 110|Homo sapiens CHM protein protein. 31 4.1
AL035451-4|CAI42042.1| 110|Homo sapiens choroideremia (Rab esco... 31 4.1
AL009175-1|CAI42097.1| 110|Homo sapiens choroideremia (Rab esco... 31 4.1
AJ133767-1|CAB46728.1| 617|Homo sapiens ZASP protein protein. 31 7.1
>L39793-1|AAA82869.1| 876|Homo sapiens nuclear factor p97 protein.
Length = 876
Score = 124 bits (299), Expect = 4e-28
Identities = 55/84 (65%), Positives = 68/84 (80%)
Frame = +2
Query: 257 LAPVLMQKLTKQDDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWR 436
L P+L Q LTKQD++DD+ +WNP KAA VCLMLL+ CCED+IVPHVLPFI +IK+ +WR
Sbjct: 322 LVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWR 381
Query: 437 YREAALMAFGSILGGLGANTLKPL 508
YR+AA+MAFG IL G + LKPL
Sbjct: 382 YRDAAVMAFGCILEGPEPSQLKPL 405
Score = 113 bits (273), Expect = 6e-25
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +1
Query: 517 AMPTLIEAMYDSSIAVRDTAAWTFGRICEIVPEAAINETYLKPLLESLVNGLKAEPRVAA 696
AMPTLIE M D S+ VRDTAAWT GRICE++PEAAIN+ YL PLL+ L+ GL AEPRVA+
Sbjct: 409 AMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVAS 468
Query: 697 NVCWAFTGL 723
NVCWAF+ L
Sbjct: 469 NVCWAFSSL 477
Score = 112 bits (269), Expect = 2e-24
Identities = 55/86 (63%), Positives = 62/86 (72%)
Frame = +3
Query: 3 ALQCLVKILSLYYQHMEPYMGQALFPITLEAMKSDIDEISLQGIEFWSNVSXXXXXXXXX 182
ALQ LVKI+SLYYQ+ME YMG ALF IT+EAMKSDIDE++LQGIEFWSNV
Sbjct: 237 ALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIE 296
Query: 183 XXXXXXXGRPPTRTSRFYARGALQTL 260
GRPP TS+FYA+GALQ L
Sbjct: 297 ASEAAEQGRPPEHTSKFYAKGALQYL 322
Score = 44.4 bits (100), Expect = 5e-04
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 765 QPKTYCMSNYFDFIVQRLLETTDRQDAAQH 854
+P TYC+S+ F+ IVQ+LLETTDR D Q+
Sbjct: 493 EPATYCLSSSFELIVQKLLETTDRPDGHQN 522
>L38951-1|AAC41763.1| 876|Homo sapiens importin beta subunit
protein.
Length = 876
Score = 124 bits (299), Expect = 4e-28
Identities = 55/84 (65%), Positives = 68/84 (80%)
Frame = +2
Query: 257 LAPVLMQKLTKQDDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWR 436
L P+L Q LTKQD++DD+ +WNP KAA VCLMLL+ CCED+IVPHVLPFI +IK+ +WR
Sbjct: 322 LVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWR 381
Query: 437 YREAALMAFGSILGGLGANTLKPL 508
YR+AA+MAFG IL G + LKPL
Sbjct: 382 YRDAAVMAFGCILEGPEPSQLKPL 405
Score = 113 bits (273), Expect = 6e-25
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +1
Query: 517 AMPTLIEAMYDSSIAVRDTAAWTFGRICEIVPEAAINETYLKPLLESLVNGLKAEPRVAA 696
AMPTLIE M D S+ VRDTAAWT GRICE++PEAAIN+ YL PLL+ L+ GL AEPRVA+
Sbjct: 409 AMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVAS 468
Query: 697 NVCWAFTGL 723
NVCWAF+ L
Sbjct: 469 NVCWAFSSL 477
Score = 112 bits (269), Expect = 2e-24
Identities = 55/86 (63%), Positives = 62/86 (72%)
Frame = +3
Query: 3 ALQCLVKILSLYYQHMEPYMGQALFPITLEAMKSDIDEISLQGIEFWSNVSXXXXXXXXX 182
ALQ LVKI+SLYYQ+ME YMG ALF IT+EAMKSDIDE++LQGIEFWSNV
Sbjct: 237 ALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIE 296
Query: 183 XXXXXXXGRPPTRTSRFYARGALQTL 260
GRPP TS+FYA+GALQ L
Sbjct: 297 ASEAAEQGRPPEHTSKFYAKGALQYL 322
Score = 44.4 bits (100), Expect = 5e-04
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 765 QPKTYCMSNYFDFIVQRLLETTDRQDAAQH 854
+P TYC+S+ F+ IVQ+LLETTDR D Q+
Sbjct: 493 EPATYCLSSSFELIVQKLLETTDRPDGHQN 522
>BT009797-1|AAP88799.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 124 bits (299), Expect = 4e-28
Identities = 55/84 (65%), Positives = 68/84 (80%)
Frame = +2
Query: 257 LAPVLMQKLTKQDDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWR 436
L P+L Q LTKQD++DD+ +WNP KAA VCLMLL+ CCED+IVPHVLPFI +IK+ +WR
Sbjct: 322 LVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWR 381
Query: 437 YREAALMAFGSILGGLGANTLKPL 508
YR+AA+MAFG IL G + LKPL
Sbjct: 382 YRDAAVMAFGCILEGPEPSQLKPL 405
Score = 113 bits (273), Expect = 6e-25
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +1
Query: 517 AMPTLIEAMYDSSIAVRDTAAWTFGRICEIVPEAAINETYLKPLLESLVNGLKAEPRVAA 696
AMPTLIE M D S+ VRDTAAWT GRICE++PEAAIN+ YL PLL+ L+ GL AEPRVA+
Sbjct: 409 AMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVAS 468
Query: 697 NVCWAFTGL 723
NVCWAF+ L
Sbjct: 469 NVCWAFSSL 477
Score = 112 bits (269), Expect = 2e-24
Identities = 55/86 (63%), Positives = 62/86 (72%)
Frame = +3
Query: 3 ALQCLVKILSLYYQHMEPYMGQALFPITLEAMKSDIDEISLQGIEFWSNVSXXXXXXXXX 182
ALQ LVKI+SLYYQ+ME YMG ALF IT+EAMKSDIDE++LQGIEFWSNV
Sbjct: 237 ALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIE 296
Query: 183 XXXXXXXGRPPTRTSRFYARGALQTL 260
GRPP TS+FYA+GALQ L
Sbjct: 297 ASEAAEQGRPPEHTSKFYAKGALQYL 322
Score = 44.4 bits (100), Expect = 5e-04
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 765 QPKTYCMSNYFDFIVQRLLETTDRQDAAQH 854
+P TYC+S+ F+ IVQ+LLETTDR D Q+
Sbjct: 493 EPATYCLSSSFELIVQKLLETTDRPDGHQN 522
>BC036703-1|AAH36703.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 124 bits (299), Expect = 4e-28
Identities = 55/84 (65%), Positives = 68/84 (80%)
Frame = +2
Query: 257 LAPVLMQKLTKQDDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWR 436
L P+L Q LTKQD++DD+ +WNP KAA VCLMLL+ CCED+IVPHVLPFI +IK+ +WR
Sbjct: 322 LVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWR 381
Query: 437 YREAALMAFGSILGGLGANTLKPL 508
YR+AA+MAFG IL G + LKPL
Sbjct: 382 YRDAAVMAFGCILEGPEPSQLKPL 405
Score = 113 bits (273), Expect = 6e-25
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +1
Query: 517 AMPTLIEAMYDSSIAVRDTAAWTFGRICEIVPEAAINETYLKPLLESLVNGLKAEPRVAA 696
AMPTLIE M D S+ VRDTAAWT GRICE++PEAAIN+ YL PLL+ L+ GL AEPRVA+
Sbjct: 409 AMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVAS 468
Query: 697 NVCWAFTGL 723
NVCWAF+ L
Sbjct: 469 NVCWAFSSL 477
Score = 112 bits (269), Expect = 2e-24
Identities = 55/86 (63%), Positives = 62/86 (72%)
Frame = +3
Query: 3 ALQCLVKILSLYYQHMEPYMGQALFPITLEAMKSDIDEISLQGIEFWSNVSXXXXXXXXX 182
ALQ LVKI+SLYYQ+ME YMG ALF IT+EAMKSDIDE++LQGIEFWSNV
Sbjct: 237 ALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIE 296
Query: 183 XXXXXXXGRPPTRTSRFYARGALQTL 260
GRPP TS+FYA+GALQ L
Sbjct: 297 ASEAAEQGRPPEHTSKFYAKGALQYL 322
Score = 44.4 bits (100), Expect = 5e-04
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 765 QPKTYCMSNYFDFIVQRLLETTDRQDAAQH 854
+P TYC+S+ F+ IVQ+LLETTDR D Q+
Sbjct: 493 EPATYCLSSSFELIVQKLLETTDRPDGHQN 522
>BC024045-1|AAH24045.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 124 bits (299), Expect = 4e-28
Identities = 55/84 (65%), Positives = 68/84 (80%)
Frame = +2
Query: 257 LAPVLMQKLTKQDDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWR 436
L P+L Q LTKQD++DD+ +WNP KAA VCLMLL+ CCED+IVPHVLPFI +IK+ +WR
Sbjct: 322 LVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWR 381
Query: 437 YREAALMAFGSILGGLGANTLKPL 508
YR+AA+MAFG IL G + LKPL
Sbjct: 382 YRDAAVMAFGCILEGPEPSQLKPL 405
Score = 113 bits (273), Expect = 6e-25
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +1
Query: 517 AMPTLIEAMYDSSIAVRDTAAWTFGRICEIVPEAAINETYLKPLLESLVNGLKAEPRVAA 696
AMPTLIE M D S+ VRDTAAWT GRICE++PEAAIN+ YL PLL+ L+ GL AEPRVA+
Sbjct: 409 AMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVAS 468
Query: 697 NVCWAFTGL 723
NVCWAF+ L
Sbjct: 469 NVCWAFSSL 477
Score = 112 bits (269), Expect = 2e-24
Identities = 55/86 (63%), Positives = 62/86 (72%)
Frame = +3
Query: 3 ALQCLVKILSLYYQHMEPYMGQALFPITLEAMKSDIDEISLQGIEFWSNVSXXXXXXXXX 182
ALQ LVKI+SLYYQ+ME YMG ALF IT+EAMKSDIDE++LQGIEFWSNV
Sbjct: 237 ALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIE 296
Query: 183 XXXXXXXGRPPTRTSRFYARGALQTL 260
GRPP TS+FYA+GALQ L
Sbjct: 297 ASEAAEQGRPPEHTSKFYAKGALQYL 322
Score = 44.4 bits (100), Expect = 5e-04
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 765 QPKTYCMSNYFDFIVQRLLETTDRQDAAQH 854
+P TYC+S+ F+ IVQ+LLETTDR D Q+
Sbjct: 493 EPATYCLSSSFELIVQKLLETTDRPDGHQN 522
>BC003572-1|AAH03572.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 124 bits (299), Expect = 4e-28
Identities = 55/84 (65%), Positives = 68/84 (80%)
Frame = +2
Query: 257 LAPVLMQKLTKQDDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWR 436
L P+L Q LTKQD++DD+ +WNP KAA VCLMLL+ CCED+IVPHVLPFI +IK+ +WR
Sbjct: 322 LVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWR 381
Query: 437 YREAALMAFGSILGGLGANTLKPL 508
YR+AA+MAFG IL G + LKPL
Sbjct: 382 YRDAAVMAFGCILEGPEPSQLKPL 405
Score = 113 bits (273), Expect = 6e-25
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +1
Query: 517 AMPTLIEAMYDSSIAVRDTAAWTFGRICEIVPEAAINETYLKPLLESLVNGLKAEPRVAA 696
AMPTLIE M D S+ VRDTAAWT GRICE++PEAAIN+ YL PLL+ L+ GL AEPRVA+
Sbjct: 409 AMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVAS 468
Query: 697 NVCWAFTGL 723
NVCWAF+ L
Sbjct: 469 NVCWAFSSL 477
Score = 112 bits (269), Expect = 2e-24
Identities = 55/86 (63%), Positives = 62/86 (72%)
Frame = +3
Query: 3 ALQCLVKILSLYYQHMEPYMGQALFPITLEAMKSDIDEISLQGIEFWSNVSXXXXXXXXX 182
ALQ LVKI+SLYYQ+ME YMG ALF IT+EAMKSDIDE++LQGIEFWSNV
Sbjct: 237 ALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIE 296
Query: 183 XXXXXXXGRPPTRTSRFYARGALQTL 260
GRPP TS+FYA+GALQ L
Sbjct: 297 ASEAAEQGRPPEHTSKFYAKGALQYL 322
Score = 44.4 bits (100), Expect = 5e-04
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 765 QPKTYCMSNYFDFIVQRLLETTDRQDAAQH 854
+P TYC+S+ F+ IVQ+LLETTDR D Q+
Sbjct: 493 EPATYCLSSSFELIVQKLLETTDRPDGHQN 522
>U72395-1|AAB68948.1| 890|Homo sapiens MIP protein.
Length = 890
Score = 49.6 bits (113), Expect = 1e-05
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = +2
Query: 293 DDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMAFGSI 472
DD D +WN K ++ L +L+N DE++PH+LP + + W +E+ ++ G+I
Sbjct: 365 DDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAI 424
Query: 473 LGG 481
G
Sbjct: 425 AEG 427
>U72069-1|AAB58254.1| 890|Homo sapiens karyopherin beta2 protein.
Length = 890
Score = 49.6 bits (113), Expect = 1e-05
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = +2
Query: 293 DDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMAFGSI 472
DD D +WN K ++ L +L+N DE++PH+LP + + W +E+ ++ G+I
Sbjct: 365 DDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAI 424
Query: 473 LGG 481
G
Sbjct: 425 AEG 427
>U70322-1|AAC50723.1| 890|Homo sapiens transportin protein.
Length = 890
Score = 49.6 bits (113), Expect = 1e-05
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = +2
Query: 293 DDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMAFGSI 472
DD D +WN K ++ L +L+N DE++PH+LP + + W +E+ ++ G+I
Sbjct: 365 DDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAI 424
Query: 473 LGG 481
G
Sbjct: 425 AEG 427
>BC040340-1|AAH40340.1| 890|Homo sapiens transportin 1 protein.
Length = 890
Score = 49.6 bits (113), Expect = 1e-05
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = +2
Query: 293 DDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMAFGSI 472
DD D +WN K ++ L +L+N DE++PH+LP + + W +E+ ++ G+I
Sbjct: 365 DDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAI 424
Query: 473 LGG 481
G
Sbjct: 425 AEG 427
>BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin 3,
karyopherin beta 2b) protein.
Length = 887
Score = 49.2 bits (112), Expect = 2e-05
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 287 KQDDSDDEL-EWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMAF 463
+ DD DD L +WN K ++ L +L+N +E++PH+LP + + W +E+ ++
Sbjct: 359 EDDDDDDALSDWNLRKCSAAALDVLANVFREELLPHLLPLLKGLLFHPEWVVKESGILVL 418
Query: 464 GSILGG 481
G+I G
Sbjct: 419 GAIAEG 424
>BC018314-1|AAH18314.1| 771|Homo sapiens Unknown (protein for
IMAGE:4154236) protein.
Length = 771
Score = 49.2 bits (112), Expect = 2e-05
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 287 KQDDSDDEL-EWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMAF 463
+ DD DD L +WN K ++ L +L+N +E++PH+LP + + W +E+ ++
Sbjct: 359 EDDDDDDALSDWNLRKCSAAALDVLANVFREELLPHLLPLLKGLLFHPEWVVKESGILVL 418
Query: 464 GSILGG 481
G+I G
Sbjct: 419 GAIAEG 424
>AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homolog
protein.
Length = 887
Score = 49.2 bits (112), Expect = 2e-05
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 287 KQDDSDDEL-EWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMAF 463
+ DD DD L +WN K ++ L +L+N +E++PH+LP + + W +E+ ++
Sbjct: 359 EDDDDDDALSDWNLRKCSAAALDVLANVFREELLPHLLPLLKGLLFHPEWVVKESGILVL 418
Query: 464 GSILGG 481
G+I G
Sbjct: 419 GAIAEG 424
>AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein
protein.
Length = 1051
Score = 49.2 bits (112), Expect = 2e-05
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 287 KQDDSDDEL-EWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMAF 463
+ DD DD L +WN K ++ L +L+N +E++PH+LP + + W +E+ ++
Sbjct: 523 EDDDDDDALSDWNLRKCSAAALDVLANVFREELLPHLLPLLKGLLFHPEWVVKESGILVL 582
Query: 464 GSILGG 481
G+I G
Sbjct: 583 GAIAEG 588
>AF019039-1|AAB83973.1| 896|Homo sapiens transportin2 protein.
Length = 896
Score = 47.6 bits (108), Expect = 6e-05
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +2
Query: 287 KQDDSDDEL-EWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMAF 463
+ DD DD L +WN K ++ L +L+N +E++PH+LP+ + E W +E+ ++
Sbjct: 359 EDDDDDDALSDWNLRKCSAAALDVLANVFREELLPHLLPYQSLLFHPE-WVVKESGILVL 417
Query: 464 GSILGG 481
G+I G
Sbjct: 418 GAIAEG 423
>J02902-1|AAA36399.1| 589|Homo sapiens phosphatase 2A regulatory
subunit protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.76
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 520 MPTLIEAMYDSSIAVRDTAAWTFGRICEIV-PEAAINETYLKPLLESLVNGLKAEPRVAA 696
MPTL +A D S AVR A F + + V PE I +T L P ++L+ +AE R AA
Sbjct: 245 MPTLRQAAEDKSWAVRYMVADKFTELQKAVGPE--ITKTDLVPAFQNLMKDCEAEVRAAA 302
Query: 697 N 699
+
Sbjct: 303 S 303
>BC047409-1|AAH47409.1| 539|Homo sapiens karyopherin alpha 5
(importin alpha 6) protein.
Length = 539
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Frame = +1
Query: 493 HSETIMEN-AMPTLIEAMYDSSIAVRDTAAWTFGRICEIVPEA---AINETYLKPLLESL 660
H++ ++E A+P I+ + V++ A W G I E +N L PLLE L
Sbjct: 162 HTKVVIETGAVPIFIKLLNSEHEDVQEQAVWALGNIAGDNAECRDFVLNCEILPPLLELL 221
Query: 661 VNGLKAEPRVAANVCWAFTGL 723
N + N WA + L
Sbjct: 222 TNSNRL--TTTRNAVWALSNL 240
Score = 30.7 bits (66), Expect = 7.1
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 520 MPTLIEAMYDSS-IAVRDTAAWTFGRICEIVPEAAINETYLKPLLESLVNGL-KAEPRVA 693
+P L+E + +S+ + A W +C N + + P L L L ++P V
Sbjct: 214 LPPLLELLTNSNRLTTTRNAVWALSNLCR-GKNPPPNFSKVSPCLNVLSRLLFSSDPDVL 272
Query: 694 ANVCWAFTGL 723
A+VCWA + L
Sbjct: 273 ADVCWALSYL 282
>AL132795-5|CAI20500.1| 539|Homo sapiens karyopherin alpha 5
(importin alpha 6) protein.
Length = 539
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Frame = +1
Query: 493 HSETIMEN-AMPTLIEAMYDSSIAVRDTAAWTFGRICEIVPEA---AINETYLKPLLESL 660
H++ ++E A+P I+ + V++ A W G I E +N L PLLE L
Sbjct: 162 HTKVVIETGAVPIFIKLLNSEHEDVQEQAVWALGNIAGDNAECRDFVLNCEILPPLLELL 221
Query: 661 VNGLKAEPRVAANVCWAFTGL 723
N + N WA + L
Sbjct: 222 TNSNRL--TTTRNAVWALSNL 240
Score = 30.7 bits (66), Expect = 7.1
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 520 MPTLIEAMYDSS-IAVRDTAAWTFGRICEIVPEAAINETYLKPLLESLVNGL-KAEPRVA 693
+P L+E + +S+ + A W +C N + + P L L L ++P V
Sbjct: 214 LPPLLELLTNSNRLTTTRNAVWALSNLCR-GKNPPPNFSKVSPCLNVLSRLLFSSDPDVL 272
Query: 694 ANVCWAFTGL 723
A+VCWA + L
Sbjct: 273 ADVCWALSYL 282
>AF005361-1|AAC51868.1| 536|Homo sapiens importin alpha 6 protein.
Length = 536
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Frame = +1
Query: 493 HSETIMEN-AMPTLIEAMYDSSIAVRDTAAWTFGRICEIVPEA---AINETYLKPLLESL 660
H++ ++E A+P I+ + V++ A W G I E +N L PLLE L
Sbjct: 159 HTKVVIETGAVPIFIKLLNSEHEDVQEQAVWALGNIAGDNAECRDFVLNCEILPPLLELL 218
Query: 661 VNGLKAEPRVAANVCWAFTGL 723
N + N WA + L
Sbjct: 219 TNSNRL--TTTRNAVWALSNL 237
Score = 30.7 bits (66), Expect = 7.1
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 520 MPTLIEAMYDSS-IAVRDTAAWTFGRICEIVPEAAINETYLKPLLESLVNGL-KAEPRVA 693
+P L+E + +S+ + A W +C N + + P L L L ++P V
Sbjct: 211 LPPLLELLTNSNRLTTTRNAVWALSNLCR-GKNPPPNFSKVSPCLNVLSRLLFSSDPDVL 269
Query: 694 ANVCWAFTGL 723
A+VCWA + L
Sbjct: 270 ADVCWALSYL 279
>BC130496-1|AAI30497.1| 110|Homo sapiens CHM protein protein.
Length = 110
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 704 VGHSPVWQKQHTRQRMGVILSAKD--ILHVKLF*FHRSEI 817
V SPVWQ Q + LS KD I HV++F + RS +
Sbjct: 69 VSDSPVWQDQILENEEAIALSRKDKTIQHVEVFCYARSTL 108
>BC130494-1|AAI30495.1| 110|Homo sapiens CHM protein protein.
Length = 110
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 704 VGHSPVWQKQHTRQRMGVILSAKD--ILHVKLF*FHRSEI 817
V SPVWQ Q + LS KD I HV++F + RS +
Sbjct: 69 VSDSPVWQDQILENEEAIALSRKDKTIQHVEVFCYARSTL 108
>AL035451-4|CAI42042.1| 110|Homo sapiens choroideremia (Rab escort
protein 1) protein.
Length = 110
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 704 VGHSPVWQKQHTRQRMGVILSAKD--ILHVKLF*FHRSEI 817
V SPVWQ Q + LS KD I HV++F + RS +
Sbjct: 69 VSDSPVWQDQILENEEAIALSRKDKTIQHVEVFCYARSTL 108
>AL009175-1|CAI42097.1| 110|Homo sapiens choroideremia (Rab escort
protein 1) protein.
Length = 110
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 704 VGHSPVWQKQHTRQRMGVILSAKD--ILHVKLF*FHRSEI 817
V SPVWQ Q + LS KD I HV++F + RS +
Sbjct: 69 VSDSPVWQDQILENEEAIALSRKDKTIQHVEVFCYARSTL 108
>AJ133767-1|CAB46728.1| 617|Homo sapiens ZASP protein protein.
Length = 617
Score = 30.7 bits (66), Expect = 7.1
Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Frame = -2
Query: 783 CNMSLAD--RITPIRCLVCCFC-QTGECPTNISCNSRFSF*TIYKTL**WFQICFIDSSF 613
C SLAD + + C C + P CN++ ++ W CF+ ++
Sbjct: 470 CKTSLADVCXVEEQNNVYCERCYEQFXAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAAC 529
Query: 612 RDNFTNSTKCPSSGVPYSYTRIIHRFNQSWHG 517
+ F NS G PY I+ F+ HG
Sbjct: 530 KKPFGNSLFHMEDGEPYCEKDYINLFSTKCHG 561
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,773,288
Number of Sequences: 237096
Number of extensions: 1965004
Number of successful extensions: 4092
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4086
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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