Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40864
(556 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D50920-1|BAA09479.2| 1006|Homo sapiens KIAA0130 protein. 50 7e-06
BC011375-1|AAH11375.1| 989|Homo sapiens THRAP4 protein protein. 50 7e-06
AF277379-1|AAF78764.1| 989|Homo sapiens vitamin D receptor-inte... 50 7e-06
AF055995-1|AAC39855.1| 989|Homo sapiens thyroid hormone recepto... 50 7e-06
BC128143-1|AAI28144.1| 332|Homo sapiens C4orf29 protein protein. 30 4.7
BC128142-1|AAI28143.1| 321|Homo sapiens C4orf29 protein protein. 30 4.7
BC034253-1|AAH34253.1| 414|Homo sapiens chromosome 4 open readi... 30 4.7
AK024759-1|BAB14990.1| 245|Homo sapiens protein ( Homo sapiens ... 30 4.7
>D50920-1|BAA09479.2| 1006|Homo sapiens KIAA0130 protein.
Length = 1006
Score = 49.6 bits (113), Expect = 7e-06
Identities = 24/76 (31%), Positives = 44/76 (57%)
Frame = +3
Query: 30 LQALIAINVFSNPSAGMQQISSQLLMVQKIKGYSLSRLYCELIRACFISLNDSSNDASKQ 209
+ A+I + N + Q + QL MV++++ E+ +ACF+ L +S + +++
Sbjct: 261 VHAVILLEGTMNLTGETQSLVEQLTMVKRMQHIPTPLFVLEIWKACFVGLIESP-EGTEE 319
Query: 210 SLWAAFTFLKVPQVII 257
W AFTFLK+PQV++
Sbjct: 320 LKWTAFTFLKIPQVLV 335
Score = 35.9 bits (79), Expect = 0.095
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +2
Query: 290 ESEYSTEVVEAFEMLLQSAPLLDIVDTKNSCNSVISLIEPLVKLNVLSDNTLTYFKQKRE 469
+ +++ +V AFE LL+ PLLD D + +C+ L++ K +LS+ ++ KR+
Sbjct: 344 DKDFTEDVNCAFEFLLKLTPLLDKADQRCNCDCTNFLLQECGKQGLLSEASVNNLMAKRK 403
>BC011375-1|AAH11375.1| 989|Homo sapiens THRAP4 protein protein.
Length = 989
Score = 49.6 bits (113), Expect = 7e-06
Identities = 24/76 (31%), Positives = 44/76 (57%)
Frame = +3
Query: 30 LQALIAINVFSNPSAGMQQISSQLLMVQKIKGYSLSRLYCELIRACFISLNDSSNDASKQ 209
+ A+I + N + Q + QL MV++++ E+ +ACF+ L +S + +++
Sbjct: 244 VHAVILLEGTMNLTGETQSLVEQLTMVKRMQHIPTPLFVLEIWKACFVGLIESP-EGTEE 302
Query: 210 SLWAAFTFLKVPQVII 257
W AFTFLK+PQV++
Sbjct: 303 LKWTAFTFLKIPQVLV 318
Score = 35.9 bits (79), Expect = 0.095
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +2
Query: 290 ESEYSTEVVEAFEMLLQSAPLLDIVDTKNSCNSVISLIEPLVKLNVLSDNTLTYFKQKRE 469
+ +++ +V AFE LL+ PLLD D + +C+ L++ K +LS+ ++ KR+
Sbjct: 327 DKDFTEDVNCAFEFLLKLTPLLDKADQRCNCDCTNFLLQECGKQGLLSEASVNNLMAKRK 386
>AF277379-1|AAF78764.1| 989|Homo sapiens vitamin D
receptor-interacting protein complex component DRIP100
protein.
Length = 989
Score = 49.6 bits (113), Expect = 7e-06
Identities = 24/76 (31%), Positives = 44/76 (57%)
Frame = +3
Query: 30 LQALIAINVFSNPSAGMQQISSQLLMVQKIKGYSLSRLYCELIRACFISLNDSSNDASKQ 209
+ A+I + N + Q + QL MV++++ E+ +ACF+ L +S + +++
Sbjct: 244 VHAVILLEGTMNLTGETQSLVEQLTMVKRMQHIPTPLFVLEIWKACFVGLIESP-EGTEE 302
Query: 210 SLWAAFTFLKVPQVII 257
W AFTFLK+PQV++
Sbjct: 303 LKWTAFTFLKIPQVLV 318
Score = 35.9 bits (79), Expect = 0.095
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +2
Query: 290 ESEYSTEVVEAFEMLLQSAPLLDIVDTKNSCNSVISLIEPLVKLNVLSDNTLTYFKQKRE 469
+ +++ +V AFE LL+ PLLD D + +C+ L++ K +LS+ ++ KR+
Sbjct: 327 DKDFTEDVNCAFEFLLKLTPLLDKADQRCNCDCTNFLLQECGKQGLLSEASVNNLMAKRK 386
>AF055995-1|AAC39855.1| 989|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP100
protein.
Length = 989
Score = 49.6 bits (113), Expect = 7e-06
Identities = 24/76 (31%), Positives = 44/76 (57%)
Frame = +3
Query: 30 LQALIAINVFSNPSAGMQQISSQLLMVQKIKGYSLSRLYCELIRACFISLNDSSNDASKQ 209
+ A+I + N + Q + QL MV++++ E+ +ACF+ L +S + +++
Sbjct: 244 VHAVILLEGTMNLTGETQSLVEQLTMVKRMQHIPTPLFVLEIWKACFVGLIESP-EGTEE 302
Query: 210 SLWAAFTFLKVPQVII 257
W AFTFLK+PQV++
Sbjct: 303 LKWTAFTFLKIPQVLV 318
Score = 35.9 bits (79), Expect = 0.095
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +2
Query: 290 ESEYSTEVVEAFEMLLQSAPLLDIVDTKNSCNSVISLIEPLVKLNVLSDNTLTYFKQKRE 469
+ +++ +V AFE LL+ PLLD D + +C+ L++ K +LS+ ++ KR+
Sbjct: 327 DKDFTEDVNCAFEFLLKLTPLLDKADQRCNCDCTNFLLQECGKQGLLSEASVNNLMAKRK 386
>BC128143-1|AAI28144.1| 332|Homo sapiens C4orf29 protein protein.
Length = 332
Score = 30.3 bits (65), Expect = 4.7
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -2
Query: 453 KYVKVLSDRTLSLTNGSISEITLLQEFLVSTISRSGADCNNISKASTTSVEYSLSL 286
++VK + LTN ++ TL + +S+ ADC+N SK S ++ L L
Sbjct: 160 EFVKHFTSSADKLTNLNLVSRTLNLDISNQVVSQKPADCHNSSKTSVSATSEGLLL 215
>BC128142-1|AAI28143.1| 321|Homo sapiens C4orf29 protein protein.
Length = 321
Score = 30.3 bits (65), Expect = 4.7
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -2
Query: 453 KYVKVLSDRTLSLTNGSISEITLLQEFLVSTISRSGADCNNISKASTTSVEYSLSL 286
++VK + LTN ++ TL + +S+ ADC+N SK S ++ L L
Sbjct: 149 EFVKHFTSSADKLTNLNLVSRTLNLDISNQVVSQKPADCHNSSKTSVSATSEGLLL 204
>BC034253-1|AAH34253.1| 414|Homo sapiens chromosome 4 open reading
frame 29 protein.
Length = 414
Score = 30.3 bits (65), Expect = 4.7
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -2
Query: 453 KYVKVLSDRTLSLTNGSISEITLLQEFLVSTISRSGADCNNISKASTTSVEYSLSL 286
++VK + LTN ++ TL + +S+ ADC+N SK S ++ L L
Sbjct: 242 EFVKHFTSSADKLTNLNLVSRTLNLDISNQVVSQKPADCHNSSKTSVSATSEGLLL 297
>AK024759-1|BAB14990.1| 245|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21106 fis, clone CAS05176. ).
Length = 245
Score = 30.3 bits (65), Expect = 4.7
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -2
Query: 453 KYVKVLSDRTLSLTNGSISEITLLQEFLVSTISRSGADCNNISKASTTSVEYSLSL 286
++VK + LTN ++ TL + +S+ ADC+N SK S ++ L L
Sbjct: 73 EFVKHFTSSADKLTNLNLVSRTLNLDISNQVVSQKPADCHNSSKTSVSATSEGLLL 128
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,794,474
Number of Sequences: 237096
Number of extensions: 1454629
Number of successful extensions: 6098
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6098
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -