Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40854
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64791-1|AAB06460.1| 1179|Homo sapiens Golgi membrane sialoglyco...    30   9.1  
U28811-1|AAB02178.1| 1177|Homo sapiens cysteine-rich fibroblast ...    30   9.1  
BC060822-1|AAH60822.1| 1203|Homo sapiens golgi apparatus protein...    30   9.1  

>U64791-1|AAB06460.1| 1179|Homo sapiens Golgi membrane
           sialoglycoprotein MG160 protein.
          Length = 1179

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = -2

Query: 162 THFFLIQVKKIYGFD*IIKMAGGRWALELPRCPNVNAAVESLIC 31
           THF L+Q+K  + F    KMA     L+L  CPN+   V+ +IC
Sbjct: 739 THFQLVQMKD-FRFSYKFKMACKEDVLKL--CPNIKKKVDVVIC 779


>U28811-1|AAB02178.1| 1177|Homo sapiens cysteine-rich fibroblast
           growth factor receptor protein.
          Length = 1177

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = -2

Query: 162 THFFLIQVKKIYGFD*IIKMAGGRWALELPRCPNVNAAVESLIC 31
           THF L+Q+K  + F    KMA     L+L  CPN+   V+ +IC
Sbjct: 737 THFQLVQMKD-FRFSYKFKMACKEDVLKL--CPNIKKKVDVVIC 777


>BC060822-1|AAH60822.1| 1203|Homo sapiens golgi apparatus protein 1
           protein.
          Length = 1203

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = -2

Query: 162 THFFLIQVKKIYGFD*IIKMAGGRWALELPRCPNVNAAVESLIC 31
           THF L+Q+K  + F    KMA     L+L  CPN+   V+ +IC
Sbjct: 739 THFQLVQMKD-FRFSYKFKMACKEDVLKL--CPNIKKKVDVVIC 779


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,717,567
Number of Sequences: 237096
Number of extensions: 1667223
Number of successful extensions: 2751
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2748
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)