Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40832
(629 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL731544-3|CAI14998.1| 431|Homo sapiens novel SH2 domain-contai... 71 3e-12
AL731544-1|CAI14996.1| 215|Homo sapiens novel SH2 domain-contai... 71 3e-12
AL731544-2|CAI14997.1| 357|Homo sapiens novel SH2 domain-contai... 69 2e-11
AK123885-1|BAC85715.1| 357|Homo sapiens protein ( Homo sapiens ... 69 2e-11
BC082982-1|AAH82982.1| 454|Homo sapiens SH2D4A protein protein. 66 1e-10
AK024799-1|BAB15010.1| 454|Homo sapiens protein ( Homo sapiens ... 66 1e-10
AK123978-1|BAC85741.1| 309|Homo sapiens protein ( Homo sapiens ... 35 0.27
AB051529-1|BAB21833.2| 1301|Homo sapiens KIAA1742 protein protein. 31 3.4
BC109271-1|AAI09272.1| 462|Homo sapiens ZSCAN29 protein protein. 31 4.5
U34051-1|AAC50278.1| 367|Homo sapiens cyclin-dependent kinase 5... 30 5.9
DQ307839-1|ABB96255.1| 367|Homo sapiens cyclin-dependent kinase... 30 5.9
BC041771-1|AAH41771.1| 367|Homo sapiens cyclin-dependent kinase... 30 5.9
AC097468-1|AAX88916.1| 367|Homo sapiens unknown protein. 30 5.9
>AL731544-3|CAI14998.1| 431|Homo sapiens novel SH2
domain-containing protein protein.
Length = 431
Score = 70.9 bits (166), Expect = 3e-12
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Frame = +2
Query: 50 MLQRILRDMWVDPEILAELDETQKQTLFCKMREEQVRRW---QAWDDKISKDDIQ-PKFQ 217
MLQ+IL DM++DPE+LAEL + QK LF KMREEQ+RRW + W+ + ++ PK +
Sbjct: 1 MLQQILHDMYIDPELLAELSDVQKHILFYKMREEQLRRWKERETWEALAQDEGLRPPKTK 60
Query: 218 KNGKKQVQFLKG 253
+ K +Q+L G
Sbjct: 61 RASDKHIQWLLG 72
Score = 34.7 bits (76), Expect = 0.27
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1
Query: 256 DGXPWVWVMGEHPDDKSIESI 318
DG WVW+MGE P DK E I
Sbjct: 74 DGEVWVWIMGEGPGDKPYEEI 94
>AL731544-1|CAI14996.1| 215|Homo sapiens novel SH2
domain-containing protein protein.
Length = 215
Score = 70.9 bits (166), Expect = 3e-12
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Frame = +2
Query: 50 MLQRILRDMWVDPEILAELDETQKQTLFCKMREEQVRRW---QAWDDKISKDDIQ-PKFQ 217
MLQ+IL DM++DPE+LAEL + QK LF KMREEQ+RRW + W+ + ++ PK +
Sbjct: 1 MLQQILHDMYIDPELLAELSDVQKHILFYKMREEQLRRWKERETWEALAQDEGLRPPKTK 60
Query: 218 KNGKKQVQFLKG 253
+ K +Q+L G
Sbjct: 61 RASDKHIQWLLG 72
Score = 34.7 bits (76), Expect = 0.27
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1
Query: 256 DGXPWVWVMGEHPDDKSIESI 318
DG WVW+MGE P DK E I
Sbjct: 74 DGEVWVWIMGEGPGDKPYEEI 94
>AL731544-2|CAI14997.1| 357|Homo sapiens novel SH2
domain-containing protein protein.
Length = 357
Score = 68.5 bits (160), Expect = 2e-11
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
Frame = +2
Query: 50 MLQRILRDMWVDPEILAELDETQKQTLFCKMREEQVRRW---QAWDDKISKDDIQPKFQK 220
MLQ+IL DM++DPE+LAEL + QK LF KMREEQ+RRW + W+ + ++P K
Sbjct: 1 MLQQILHDMYIDPELLAELSDVQKHILFYKMREEQLRRWKERETWEALAQDEGLRPPKTK 60
Query: 221 N--GKKQVQFLKG 253
K +Q+L G
Sbjct: 61 RAASDKHIQWLLG 73
Score = 34.7 bits (76), Expect = 0.27
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1
Query: 256 DGXPWVWVMGEHPDDKSIESI 318
DG WVW+MGE P DK E I
Sbjct: 75 DGEVWVWIMGEGPGDKPYEEI 95
>AK123885-1|BAC85715.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ41891 fis, clone OCBBF2025028. ).
Length = 357
Score = 68.5 bits (160), Expect = 2e-11
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
Frame = +2
Query: 50 MLQRILRDMWVDPEILAELDETQKQTLFCKMREEQVRRW---QAWDDKISKDDIQPKFQK 220
MLQ+IL DM++DPE+LAEL + QK LF KMREEQ+RRW + W+ + ++P K
Sbjct: 1 MLQQILHDMYIDPELLAELSDVQKHILFYKMREEQLRRWKERETWEALAQDEGLRPPKTK 60
Query: 221 N--GKKQVQFLKG 253
K +Q+L G
Sbjct: 61 RAASDKHIQWLLG 73
Score = 34.7 bits (76), Expect = 0.27
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1
Query: 256 DGXPWVWVMGEHPDDKSIESI 318
DG WVW+MGE P DK E I
Sbjct: 75 DGEVWVWIMGEGPGDKPYEEI 95
>BC082982-1|AAH82982.1| 454|Homo sapiens SH2D4A protein protein.
Length = 454
Score = 66.1 bits (154), Expect = 1e-10
Identities = 31/71 (43%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Frame = +2
Query: 50 MLQRILRDMWVDPEILAELDETQKQTLFCKMREEQVRRWQAWDDKISKDD---IQPKFQK 220
ML++IL +M++DP++LAEL E QKQ LF KMREEQ+RRW+ + + + + ++P+ +K
Sbjct: 1 MLKQILSEMYIDPDLLAELSEEQKQILFFKMREEQIRRWKEREAAMERKESLPVKPRPKK 60
Query: 221 NGKKQVQFLKG 253
K V + G
Sbjct: 61 ENGKSVHWKLG 71
>AK024799-1|BAB15010.1| 454|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21146 fis, clone CAS09305. ).
Length = 454
Score = 66.1 bits (154), Expect = 1e-10
Identities = 31/71 (43%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Frame = +2
Query: 50 MLQRILRDMWVDPEILAELDETQKQTLFCKMREEQVRRWQAWDDKISKDD---IQPKFQK 220
ML++IL +M++DP++LAEL E QKQ LF KMREEQ+RRW+ + + + + ++P+ +K
Sbjct: 1 MLKQILSEMYIDPDLLAELSEEQKQILFFKMREEQIRRWKEREAAMERKESLPVKPRPKK 60
Query: 221 NGKKQVQFLKG 253
K V + G
Sbjct: 61 ENGKSVHWKLG 71
>AK123978-1|BAC85741.1| 309|Homo sapiens protein ( Homo sapiens
cDNA FLJ41984 fis, clone SPLEN2011422, weakly similar
to CALDESMON. ).
Length = 309
Score = 34.7 bits (76), Expect = 0.27
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1
Query: 256 DGXPWVWVMGEHPDDKSIESI 318
DG WVW+MGE P DK E I
Sbjct: 26 DGEVWVWIMGEGPGDKPYEEI 46
>AB051529-1|BAB21833.2| 1301|Homo sapiens KIAA1742 protein protein.
Length = 1301
Score = 31.1 bits (67), Expect = 3.4
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +3
Query: 324 GGSEAARPRPGS*GGAPAQEVRREGTHTAYRLQTSRQLGTEIRPFTKKHRPAGRPGDL-L 500
GG +A RPRPGS GG P + R + S T HRP+ DL L
Sbjct: 1040 GGEKAGRPRPGSVGGMPGSCSEQYELQPLAR-RRSPSFDTSTATSKLSHRPSVLSEDLQL 1098
Query: 501 H 503
H
Sbjct: 1099 H 1099
>BC109271-1|AAI09272.1| 462|Homo sapiens ZSCAN29 protein protein.
Length = 462
Score = 30.7 bits (66), Expect = 4.5
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Frame = +3
Query: 333 EAARPRPGS*GGAPAQEVRREGT---HTAYRLQTSRQLGTEIRPFTKKHRPAGRPGDLLH 503
E RPR QEVR E ++ L + RQ E +P + R DL
Sbjct: 98 EPGRPRSSVTVSVKGQEVRLEKMTPPKSSQELLSVRQESVEPQPRGVPKKERARSPDLGP 157
Query: 504 SRELRQRIEALEPEVKISEKEDLRNEDNMKLDLNKNT-LH 620
++ + E L+P + + NEDN K D+++ LH
Sbjct: 158 QEQMNPK-EKLKPFQRSGFEAGFENEDNSKRDISEEVQLH 196
>U34051-1|AAC50278.1| 367|Homo sapiens cyclin-dependent kinase 5
activator isoform p39i protein.
Length = 367
Score = 30.3 bits (65), Expect = 5.9
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 312 EHPSGGSEAARPRPGS*GGAP 374
E PSGGS AA+P PGS GG P
Sbjct: 136 EPPSGGSAAAQP-PGSGGGKP 155
>DQ307839-1|ABB96255.1| 367|Homo sapiens cyclin-dependent kinase 5,
regulatory subunit 2 (p39) protein.
Length = 367
Score = 30.3 bits (65), Expect = 5.9
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 312 EHPSGGSEAARPRPGS*GGAP 374
E PSGGS AA+P PGS GG P
Sbjct: 136 EPPSGGSAAAQP-PGSGGGKP 155
>BC041771-1|AAH41771.1| 367|Homo sapiens cyclin-dependent kinase 5,
regulatory subunit 2 (p39) protein.
Length = 367
Score = 30.3 bits (65), Expect = 5.9
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 312 EHPSGGSEAARPRPGS*GGAP 374
E PSGGS AA+P PGS GG P
Sbjct: 136 EPPSGGSAAAQP-PGSGGGKP 155
>AC097468-1|AAX88916.1| 367|Homo sapiens unknown protein.
Length = 367
Score = 30.3 bits (65), Expect = 5.9
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 312 EHPSGGSEAARPRPGS*GGAP 374
E PSGGS AA+P PGS GG P
Sbjct: 136 EPPSGGSAAAQP-PGSGGGKP 155
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,206,931
Number of Sequences: 237096
Number of extensions: 1804389
Number of successful extensions: 11132
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11128
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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