Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40817
(656 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 170 4e-42
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 170 4e-42
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 170 4e-42
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 170 4e-42
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 165 9e-41
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 92 1e-18
AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5 pr... 83 8e-16
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 32 2.1
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 32 2.1
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 32 2.1
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr... 31 3.6
M83664-1|AAA59837.1| 258|Homo sapiens HLA-DPB1 protein. 30 6.3
M28200-1|AAA53195.1| 258|Homo sapiens MHC class II lymphocyte a... 30 6.3
BT019780-1|AAV38583.1| 258|Homo sapiens major histocompatibilit... 30 6.3
BC013184-1|AAH13184.1| 258|Homo sapiens HLA-DPB1 protein protein. 30 6.3
AY804143-1|AAW78748.1| 258|Homo sapiens MHC class II antigen pr... 30 6.3
AY804133-1|AAW78738.1| 258|Homo sapiens MHC class II antigen pr... 30 6.3
CR457351-1|CAG33632.1| 337|Homo sapiens MGC4707 protein. 30 8.3
BC052291-1|AAH52291.1| 274|Homo sapiens chromosome 11 open read... 30 8.3
BC013988-1|AAH13988.1| 337|Homo sapiens chromosome 11 open read... 30 8.3
BC009455-1|AAH09455.1| 274|Homo sapiens chromosome 11 open read... 30 8.3
BC001860-1|AAH01860.1| 331|Homo sapiens chromosome 11 open read... 30 8.3
AY804141-1|AAW78746.1| 258|Homo sapiens MHC class II antigen pr... 30 8.3
AK025863-1|BAB15262.1| 331|Homo sapiens protein ( Homo sapiens ... 30 8.3
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 170 bits (413), Expect = 4e-42
Identities = 82/89 (92%), Positives = 83/89 (93%)
Frame = +3
Query: 255 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 434
RYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV
Sbjct: 55 RYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVN 114
Query: 435 AIINSGPREDSTRIGRAGTVRRQAVMFHP 521
AIINSGPREDSTRIGRAGTVRRQAV P
Sbjct: 115 AIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +2
Query: 530 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 655
VNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSY
Sbjct: 147 VNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSY 188
Score = 80.6 bits (190), Expect = 5e-15
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = +1
Query: 118 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAG 255
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAG
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAG 54
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 170 bits (413), Expect = 4e-42
Identities = 82/89 (92%), Positives = 83/89 (93%)
Frame = +3
Query: 255 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 434
RYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV
Sbjct: 55 RYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVN 114
Query: 435 AIINSGPREDSTRIGRAGTVRRQAVMFHP 521
AIINSGPREDSTRIGRAGTVRRQAV P
Sbjct: 115 AIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +2
Query: 530 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 655
VNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSY
Sbjct: 147 VNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSY 188
Score = 80.6 bits (190), Expect = 5e-15
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = +1
Query: 118 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAG 255
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAG
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAG 54
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 170 bits (413), Expect = 4e-42
Identities = 82/89 (92%), Positives = 83/89 (93%)
Frame = +3
Query: 255 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 434
RYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV
Sbjct: 55 RYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVN 114
Query: 435 AIINSGPREDSTRIGRAGTVRRQAVMFHP 521
AIINSGPREDSTRIGRAGTVRRQAV P
Sbjct: 115 AIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 86.6 bits (205), Expect = 7e-17
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = +2
Query: 530 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 655
VNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSN Y
Sbjct: 147 VNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNFY 188
Score = 80.6 bits (190), Expect = 5e-15
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = +1
Query: 118 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAG 255
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAG
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAG 54
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 170 bits (413), Expect = 4e-42
Identities = 82/89 (92%), Positives = 83/89 (93%)
Frame = +3
Query: 255 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 434
RYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV
Sbjct: 55 RYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVN 114
Query: 435 AIINSGPREDSTRIGRAGTVRRQAVMFHP 521
AIINSGPREDSTRIGRAGTVRRQAV P
Sbjct: 115 AIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +2
Query: 530 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 655
VNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSY
Sbjct: 147 VNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSY 188
Score = 80.6 bits (190), Expect = 5e-15
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = +1
Query: 118 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAG 255
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAG
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAG 54
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 165 bits (402), Expect = 9e-41
Identities = 80/89 (89%), Positives = 81/89 (91%)
Frame = +3
Query: 255 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 434
RYA FRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV
Sbjct: 55 RYAANAFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVN 114
Query: 435 AIINSGPREDSTRIGRAGTVRRQAVMFHP 521
AIINSGPREDSTRIGRAGTVRRQAV P
Sbjct: 115 AIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +2
Query: 530 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 655
VNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSY
Sbjct: 147 VNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSY 188
Score = 80.6 bits (190), Expect = 5e-15
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = +1
Query: 118 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAG 255
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAG
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAG 54
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 92.3 bits (219), Expect = 1e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +3
Query: 282 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 437
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5
protein.
Length = 55
Score = 83.0 bits (196), Expect = 8e-16
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +2
Query: 539 AIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 655
AIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSY
Sbjct: 1 AIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSY 39
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.9 bits (69), Expect = 2.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 345 CHCSDRASLESL*GAPRLGTGLYGNACVHTSS 250
C C + ++ E G R G G YG AC H S
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEHRRS 1144
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.9 bits (69), Expect = 2.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 345 CHCSDRASLESL*GAPRLGTGLYGNACVHTSS 250
C C + ++ E G R G G YG AC H S
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEHRRS 1144
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 31.9 bits (69), Expect = 2.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 345 CHCSDRASLESL*GAPRLGTGLYGNACVHTSS 250
C C + ++ E G R G G YG AC H S
Sbjct: 1130 CSCHNNSTCEPATGTCRCGPGFYGQACEHRRS 1161
>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
protein.
Length = 1640
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 345 CHCSDRASLESL*GAPRLGTGLYGNACVH 259
C C + ++ E G R G G YG AC H
Sbjct: 1423 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1451
>M83664-1|AAA59837.1| 258|Homo sapiens HLA-DPB1 protein.
Length = 258
Score = 30.3 bits (65), Expect = 6.3
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 76 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 252
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF-DSDV 71
Query: 253 GGMHTSVSV-KPSAQSWSA 306
G + +P+A+ W++
Sbjct: 72 GEFRAVTELGRPAAEYWNS 90
>M28200-1|AAA53195.1| 258|Homo sapiens MHC class II lymphocyte
antigen beta chain protein.
Length = 258
Score = 30.3 bits (65), Expect = 6.3
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 76 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 252
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF-DSDV 71
Query: 253 GGMHTSVSV-KPSAQSWSA 306
G + +P+A+ W++
Sbjct: 72 GEFRAVTELGRPAAEYWNS 90
>BT019780-1|AAV38583.1| 258|Homo sapiens major histocompatibility
complex, class II, DP beta 1 protein.
Length = 258
Score = 30.3 bits (65), Expect = 6.3
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 76 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 252
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF-DSDV 71
Query: 253 GGMHTSVSV-KPSAQSWSA 306
G + +P+A+ W++
Sbjct: 72 GEFRAVTELGRPAAEYWNS 90
>BC013184-1|AAH13184.1| 258|Homo sapiens HLA-DPB1 protein protein.
Length = 258
Score = 30.3 bits (65), Expect = 6.3
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 76 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 252
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF-DSDV 71
Query: 253 GGMHTSVSV-KPSAQSWSA 306
G + +P+A+ W++
Sbjct: 72 GEFRAVTELGRPAAEYWNS 90
>AY804143-1|AAW78748.1| 258|Homo sapiens MHC class II antigen
protein.
Length = 258
Score = 30.3 bits (65), Expect = 6.3
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 76 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 252
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF-DSDV 71
Query: 253 GGMHTSVSV-KPSAQSWSA 306
G + +P+A+ W++
Sbjct: 72 GEFRAVTELGRPAAEYWNS 90
>AY804133-1|AAW78738.1| 258|Homo sapiens MHC class II antigen
protein.
Length = 258
Score = 30.3 bits (65), Expect = 6.3
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 76 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 252
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF-DSDV 71
Query: 253 GGMHTSVSV-KPSAQSWSA 306
G + +P+A+ W++
Sbjct: 72 GEFRAVTELGRPAAEYWNS 90
>CR457351-1|CAG33632.1| 337|Homo sapiens MGC4707 protein.
Length = 337
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 396 LLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRR-QAVMFHPCAES 533
LL+G+NP V+V +SG +G AGT+ +A +F+ C E+
Sbjct: 163 LLSGKNPNTVIVPT-SSSGQHRQRPALGGAGTLEGVEASLFYQCLEN 208
>BC052291-1|AAH52291.1| 274|Homo sapiens chromosome 11 open reading
frame 49 protein.
Length = 274
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 396 LLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRR-QAVMFHPCAES 533
LL+G+NP V+V +SG +G AGT+ +A +F+ C E+
Sbjct: 163 LLSGKNPNTVIVPT-SSSGQHRQRPALGGAGTLEGVEASLFYQCLEN 208
>BC013988-1|AAH13988.1| 337|Homo sapiens chromosome 11 open reading
frame 49 protein.
Length = 337
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 396 LLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRR-QAVMFHPCAES 533
LL+G+NP V+V +SG +G AGT+ +A +F+ C E+
Sbjct: 163 LLSGKNPNTVIVPT-SSSGQHRQRPALGGAGTLEGVEASLFYQCLEN 208
>BC009455-1|AAH09455.1| 274|Homo sapiens chromosome 11 open reading
frame 49 protein.
Length = 274
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 396 LLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRR-QAVMFHPCAES 533
LL+G+NP V+V +SG +G AGT+ +A +F+ C E+
Sbjct: 163 LLSGKNPNTVIVPT-SSSGQHRQRPALGGAGTLEGVEASLFYQCLEN 208
>BC001860-1|AAH01860.1| 331|Homo sapiens chromosome 11 open reading
frame 49 protein.
Length = 331
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 396 LLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRR-QAVMFHPCAES 533
LL+G+NP V+V +SG +G AGT+ +A +F+ C E+
Sbjct: 163 LLSGKNPNTVIVPT-SSSGQHRQRPALGGAGTLEGVEASLFYQCLEN 208
>AY804141-1|AAW78746.1| 258|Homo sapiens MHC class II antigen
protein.
Length = 258
Score = 29.9 bits (64), Expect = 8.3
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 76 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 252
VA ++V S+ Q PE ++ GR CY + L+ YI +++YA++
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNRQEYARF-DSDV 71
Query: 253 GGMHTSVSV-KPSAQSWSALQTL 318
G + +P+A+ W++ + L
Sbjct: 72 GEFRAVTELGRPAAEYWNSQKDL 94
>AK025863-1|BAB15262.1| 331|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22210 fis, clone HRC01503. ).
Length = 331
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 396 LLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRR-QAVMFHPCAES 533
LL+G+NP V+V +SG +G AGT+ +A +F+ C E+
Sbjct: 163 LLSGKNPNTVIVPT-SSSGQHRQRPALGGAGTLEGVEASLFYQCLEN 208
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,467,356
Number of Sequences: 237096
Number of extensions: 1920962
Number of successful extensions: 3914
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3907
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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