Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40814
         (666 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065489-1|BAC05741.1|  231|Homo sapiens seven transmembrane hel...    32   2.1  
AF399569-1|AAK95054.1|  213|Homo sapiens olfactory receptor prot...    30   8.5  
AB065803-1|BAC06022.1|  314|Homo sapiens seven transmembrane hel...    30   8.5  

>AB065489-1|BAC05741.1|  231|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 231

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 562 LKCTETELLDLFMRXNGWLLIHLWLTESIVAKT 660
           L CT+T LL+  M  N  LL+ +W   S+++ T
Sbjct: 104 LACTDTSLLEFLMISNSGLLVIIWFLLSLISYT 136


>AF399569-1|AAK95054.1|  213|Homo sapiens olfactory receptor
           protein.
          Length = 213

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = +1

Query: 544 CIYIQILK--CTETELLDLFMRXNGWLLIHLW 633
           C  +Q++K  CT+T  L+LFM  N  L+  LW
Sbjct: 112 CYVLQVVKLACTDTFALELFMISNNGLVTLLW 143


>AB065803-1|BAC06022.1|  314|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 314

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = +1

Query: 544 CIYIQILK--CTETELLDLFMRXNGWLLIHLW 633
           C  +Q++K  CT+T  L+LFM  N  L+  LW
Sbjct: 179 CYVLQVVKLACTDTFALELFMISNNGLVTLLW 210


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,884,949
Number of Sequences: 237096
Number of extensions: 1474408
Number of successful extensions: 2149
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2149
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)