Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40811
(507 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 170 2e-42
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 170 2e-42
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 170 2e-42
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 170 2e-42
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 166 4e-41
AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5 pr... 113 3e-25
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 92 9e-19
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr... 31 1.7
BC033856-1|AAH33856.1| 283|Homo sapiens LARP1 protein protein. 30 4.0
BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein do... 30 4.0
AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein. 30 4.0
AK127866-1|BAC87168.1| 204|Homo sapiens protein ( Homo sapiens ... 30 5.3
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 29 7.1
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 29 7.1
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 29 7.1
CR457351-1|CAG33632.1| 337|Homo sapiens MGC4707 protein. 29 9.3
BC052291-1|AAH52291.1| 274|Homo sapiens chromosome 11 open read... 29 9.3
BC013988-1|AAH13988.1| 337|Homo sapiens chromosome 11 open read... 29 9.3
BC009455-1|AAH09455.1| 274|Homo sapiens chromosome 11 open read... 29 9.3
BC001860-1|AAH01860.1| 331|Homo sapiens chromosome 11 open read... 29 9.3
AK094875-1|BAC04446.1| 149|Homo sapiens protein ( Homo sapiens ... 29 9.3
AK025863-1|BAB15262.1| 331|Homo sapiens protein ( Homo sapiens ... 29 9.3
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 170 bits (414), Expect = 2e-42
Identities = 80/85 (94%), Positives = 82/85 (96%)
Frame = +1
Query: 1 PHSAGRYSHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPL 180
PHSAGRY+ KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPL
Sbjct: 50 PHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPL 109
Query: 181 QVLVTAIINSGPREDSTRIGRAGTV 255
QVLV AIINSGPREDSTRIGRAGTV
Sbjct: 110 QVLVNAIINSGPREDSTRIGRAGTV 134
Score = 143 bits (347), Expect = 3e-34
Identities = 70/73 (95%), Positives = 71/73 (97%)
Frame = +3
Query: 246 GYSRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIK 425
G RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIK
Sbjct: 132 GTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIK 191
Query: 426 KKDELERVAKSNR 464
KKDELERVAKSNR
Sbjct: 192 KKDELERVAKSNR 204
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 170 bits (414), Expect = 2e-42
Identities = 80/85 (94%), Positives = 82/85 (96%)
Frame = +1
Query: 1 PHSAGRYSHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPL 180
PHSAGRY+ KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPL
Sbjct: 50 PHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPL 109
Query: 181 QVLVTAIINSGPREDSTRIGRAGTV 255
QVLV AIINSGPREDSTRIGRAGTV
Sbjct: 110 QVLVNAIINSGPREDSTRIGRAGTV 134
Score = 143 bits (347), Expect = 3e-34
Identities = 70/73 (95%), Positives = 71/73 (97%)
Frame = +3
Query: 246 GYSRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIK 425
G RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIK
Sbjct: 132 GTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIK 191
Query: 426 KKDELERVAKSNR 464
KKDELERVAKSNR
Sbjct: 192 KKDELERVAKSNR 204
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 170 bits (414), Expect = 2e-42
Identities = 80/85 (94%), Positives = 82/85 (96%)
Frame = +1
Query: 1 PHSAGRYSHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPL 180
PHSAGRY+ KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPL
Sbjct: 50 PHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPL 109
Query: 181 QVLVTAIINSGPREDSTRIGRAGTV 255
QVLV AIINSGPREDSTRIGRAGTV
Sbjct: 110 QVLVNAIINSGPREDSTRIGRAGTV 134
Score = 140 bits (338), Expect = 3e-33
Identities = 68/73 (93%), Positives = 70/73 (95%)
Frame = +3
Query: 246 GYSRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIK 425
G RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSN YAIK
Sbjct: 132 GTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNFYAIK 191
Query: 426 KKDELERVAKSNR 464
K+DELERVAKSNR
Sbjct: 192 KRDELERVAKSNR 204
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 170 bits (414), Expect = 2e-42
Identities = 80/85 (94%), Positives = 82/85 (96%)
Frame = +1
Query: 1 PHSAGRYSHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPL 180
PHSAGRY+ KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPL
Sbjct: 50 PHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPL 109
Query: 181 QVLVTAIINSGPREDSTRIGRAGTV 255
QVLV AIINSGPREDSTRIGRAGTV
Sbjct: 110 QVLVNAIINSGPREDSTRIGRAGTV 134
Score = 143 bits (347), Expect = 3e-34
Identities = 70/73 (95%), Positives = 71/73 (97%)
Frame = +3
Query: 246 GYSRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIK 425
G RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIK
Sbjct: 132 GTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIK 191
Query: 426 KKDELERVAKSNR 464
KKDELERVAKSNR
Sbjct: 192 KKDELERVAKSNR 204
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 166 bits (403), Expect = 4e-41
Identities = 78/85 (91%), Positives = 80/85 (94%)
Frame = +1
Query: 1 PHSAGRYSHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPL 180
PHSAGRY+ FRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPL
Sbjct: 50 PHSAGRYAANAFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPL 109
Query: 181 QVLVTAIINSGPREDSTRIGRAGTV 255
QVLV AIINSGPREDSTRIGRAGTV
Sbjct: 110 QVLVNAIINSGPREDSTRIGRAGTV 134
Score = 143 bits (347), Expect = 3e-34
Identities = 70/73 (95%), Positives = 71/73 (97%)
Frame = +3
Query: 246 GYSRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIK 425
G RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIK
Sbjct: 132 GTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIK 191
Query: 426 KKDELERVAKSNR 464
KKDELERVAKSNR
Sbjct: 192 KKDELERVAKSNR 204
>AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5
protein.
Length = 55
Score = 113 bits (272), Expect = 3e-25
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +3
Query: 300 AIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 464
AIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 1 AIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 55
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 92.3 bits (219), Expect = 9e-19
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +1
Query: 43 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 198
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
protein.
Length = 1640
Score = 31.5 bits (68), Expect = 1.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 106 CHCSDRASLESL*GAPRLGTGLYGNACVNTC 14
C C + ++ E G R G G YG AC + C
Sbjct: 1423 CSCHNNSTCEPATGTCRCGPGFYGQACEHPC 1453
Score = 29.5 bits (63), Expect = 7.1
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 106 CHCSDRASLESL*GAPRLGTGLYGNACVNTC 14
C+C++R L GA GLYG C TC
Sbjct: 686 CNCANRGRCHRLYGACLCDPGLYGRFCHLTC 716
>BC033856-1|AAH33856.1| 283|Homo sapiens LARP1 protein protein.
Length = 283
Score = 30.3 bits (65), Expect = 4.0
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 193 TAIINSGPREDSTRIGRAG-TVVVKPLMFHPCAESTKQSGFCAQVHVRLHSEILKQ 357
TA I+S P E + +G G T P HP E K++GF V+ + L +
Sbjct: 32 TASISSSPSEGTPTVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNE 87
>BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein
domain family, member 1 protein.
Length = 1019
Score = 30.3 bits (65), Expect = 4.0
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 193 TAIINSGPREDSTRIGRAG-TVVVKPLMFHPCAESTKQSGFCAQVHVRLHSEILKQ 357
TA I+S P E + +G G T P HP E K++GF V+ + L +
Sbjct: 768 TASISSSPSEGTPTVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNE 823
>AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein.
Length = 1096
Score = 30.3 bits (65), Expect = 4.0
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 193 TAIINSGPREDSTRIGRAG-TVVVKPLMFHPCAESTKQSGFCAQVHVRLHSEILKQ 357
TA I+S P E + +G G T P HP E K++GF V+ + L +
Sbjct: 845 TASISSSPSEGTPTVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNE 900
>AK127866-1|BAC87168.1| 204|Homo sapiens protein ( Homo sapiens
cDNA FLJ45969 fis, clone PLACE7016454. ).
Length = 204
Score = 29.9 bits (64), Expect = 5.3
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 365 LCDCFNISECSLTCTCAQKPDCLVDSAQG*NINGL 261
LC C ++ C+ C C K C S Q ++NG+
Sbjct: 45 LCVCVHVCICACICACVWKFPCRNHSVQTESLNGV 79
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains
6 protein.
Length = 1229
Score = 29.5 bits (63), Expect = 7.1
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 106 CHCSDRASLESL*GAPRLGTGLYGNACVNTC 14
C+C++R L GA GLYG C TC
Sbjct: 506 CNCANRGRCHRLYGACLCDPGLYGRFCHLTC 536
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains
6 protein.
Length = 1229
Score = 29.5 bits (63), Expect = 7.1
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 106 CHCSDRASLESL*GAPRLGTGLYGNACVNTC 14
C+C++R L GA GLYG C TC
Sbjct: 506 CNCANRGRCHRLYGACLCDPGLYGRFCHLTC 536
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 29.5 bits (63), Expect = 7.1
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 106 CHCSDRASLESL*GAPRLGTGLYGNACVNTC 14
C+C++R L GA GLYG C TC
Sbjct: 523 CNCANRGRCHRLYGACLCDPGLYGRFCHLTC 553
>CR457351-1|CAG33632.1| 337|Homo sapiens MGC4707 protein.
Length = 337
Score = 29.1 bits (62), Expect = 9.3
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 157 LLTGENPLQVLVTAIINSGPREDSTRIGRAGTVV-VKPLMFHPCAES 294
LL+G+NP V+V +SG +G AGT+ V+ +F+ C E+
Sbjct: 163 LLSGKNPNTVIVPT-SSSGQHRQRPALGGAGTLEGVEASLFYQCLEN 208
>BC052291-1|AAH52291.1| 274|Homo sapiens chromosome 11 open reading
frame 49 protein.
Length = 274
Score = 29.1 bits (62), Expect = 9.3
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 157 LLTGENPLQVLVTAIINSGPREDSTRIGRAGTVV-VKPLMFHPCAES 294
LL+G+NP V+V +SG +G AGT+ V+ +F+ C E+
Sbjct: 163 LLSGKNPNTVIVPT-SSSGQHRQRPALGGAGTLEGVEASLFYQCLEN 208
>BC013988-1|AAH13988.1| 337|Homo sapiens chromosome 11 open reading
frame 49 protein.
Length = 337
Score = 29.1 bits (62), Expect = 9.3
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 157 LLTGENPLQVLVTAIINSGPREDSTRIGRAGTVV-VKPLMFHPCAES 294
LL+G+NP V+V +SG +G AGT+ V+ +F+ C E+
Sbjct: 163 LLSGKNPNTVIVPT-SSSGQHRQRPALGGAGTLEGVEASLFYQCLEN 208
>BC009455-1|AAH09455.1| 274|Homo sapiens chromosome 11 open reading
frame 49 protein.
Length = 274
Score = 29.1 bits (62), Expect = 9.3
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 157 LLTGENPLQVLVTAIINSGPREDSTRIGRAGTVV-VKPLMFHPCAES 294
LL+G+NP V+V +SG +G AGT+ V+ +F+ C E+
Sbjct: 163 LLSGKNPNTVIVPT-SSSGQHRQRPALGGAGTLEGVEASLFYQCLEN 208
>BC001860-1|AAH01860.1| 331|Homo sapiens chromosome 11 open reading
frame 49 protein.
Length = 331
Score = 29.1 bits (62), Expect = 9.3
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 157 LLTGENPLQVLVTAIINSGPREDSTRIGRAGTVV-VKPLMFHPCAES 294
LL+G+NP V+V +SG +G AGT+ V+ +F+ C E+
Sbjct: 163 LLSGKNPNTVIVPT-SSSGQHRQRPALGGAGTLEGVEASLFYQCLEN 208
>AK094875-1|BAC04446.1| 149|Homo sapiens protein ( Homo sapiens
cDNA FLJ37556 fis, clone BRCAN2028545. ).
Length = 149
Score = 29.1 bits (62), Expect = 9.3
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -2
Query: 392 CIN*FICNTLCDCFNISECSLTCTCAQKPDCLV 294
C ++C +C C + C C CA C+V
Sbjct: 102 CACVYVCKRVCTCACVCMCVQVCMCASVHMCIV 134
>AK025863-1|BAB15262.1| 331|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22210 fis, clone HRC01503. ).
Length = 331
Score = 29.1 bits (62), Expect = 9.3
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 157 LLTGENPLQVLVTAIINSGPREDSTRIGRAGTVV-VKPLMFHPCAES 294
LL+G+NP V+V +SG +G AGT+ V+ +F+ C E+
Sbjct: 163 LLSGKNPNTVIVPT-SSSGQHRQRPALGGAGTLEGVEASLFYQCLEN 208
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,053,695
Number of Sequences: 237096
Number of extensions: 1423211
Number of successful extensions: 2861
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2856
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -