Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40802
         (727 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    27   0.78 
DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.    24   4.2  
DQ182014-1|ABA56306.1|   55|Anopheles gambiae G(alpha)m protein.       23   7.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.6  
AJ438610-7|CAD27479.1|   86|Anopheles gambiae hypothetical prote...    23   9.6  

>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 26.6 bits (56), Expect = 0.78
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +2

Query: 491 RRLGQSNIMLDRKSLSDLASWEP-KTFEALAAVAKYKLETDRFIDGPDKCHPTGINLNLK 667
           RR+ ++N +L   +L    SW P   F   A +  + +  D  +     CH  G++    
Sbjct: 266 RRMQRTNYLLISIALIFGVSWLPLNLFNLFADLYVHSITQDIMV-AYAICHMAGMSSACS 324

Query: 668 DVMLEAWLNE 697
           + +L  WLN+
Sbjct: 325 NPLLYGWLND 334


>DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.
          Length = 144

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 534 CQTWLHGNQKHLKPSLL 584
           C  W+ GN+ HLK S L
Sbjct: 81  CNEWIAGNECHLKCSSL 97


>DQ182014-1|ABA56306.1|   55|Anopheles gambiae G(alpha)m protein.
          Length = 55

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 306 RLAAHYIGRRRNCY 347
           R  +H +GR+R CY
Sbjct: 12  RRTSHLVGRKRTCY 25


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 264 CRGPDEFWR 290
           CR PD FWR
Sbjct: 464 CRWPDSFWR 472


>AJ438610-7|CAD27479.1|   86|Anopheles gambiae hypothetical protein
           protein.
          Length = 86

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 528 NLCQTWLHGNQKH 566
           ++C  W HG +KH
Sbjct: 63  SVCPVWRHGQRKH 75


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 749,690
Number of Sequences: 2352
Number of extensions: 14652
Number of successful extensions: 69
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)