Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40752
(634 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D61380-1|BAA09603.2| 189|Homo sapiens DJ-1 protein protein. 93 7e-19
BC008188-1|AAH08188.1| 189|Homo sapiens Parkinson disease (auto... 93 7e-19
AL034417-1|CAB52550.1| 189|Homo sapiens Parkinson disease (auto... 93 7e-19
AF021819-1|AAC12806.1| 189|Homo sapiens RNA-binding protein reg... 93 7e-19
AB073864-1|BAB71782.1| 189|Homo sapiens DJ-1 protein. 93 7e-19
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 31 2.6
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 31 2.6
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 31 2.6
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 31 2.6
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 2.6
AL133227-3|CAI40553.1| 196|Homo sapiens solute carrier family 3... 30 5.9
D87119-1|BAA13250.1| 343|Homo sapiens GS3955 protein. 30 7.8
BC002637-1|AAH02637.1| 343|Homo sapiens tribbles homolog 2 (Dro... 30 7.8
AY245544-1|AAO89231.1| 343|Homo sapiens TRB2 protein protein. 30 7.8
AC009486-1|AAY15015.1| 343|Homo sapiens unknown protein. 30 7.8
>D61380-1|BAA09603.2| 189|Homo sapiens DJ-1 protein protein.
Length = 189
Score = 93.1 bits (221), Expect = 7e-19
Identities = 46/87 (52%), Positives = 60/87 (68%)
Frame = +3
Query: 249 GCEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEALAEKQQYDAVI 428
G EEMETVI VD++RR G+ VT+AGL G PV CSR V + PD SL +A E YD V+
Sbjct: 13 GAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKE-GPYDVVV 71
Query: 429 LPGGLEGSDSLSKSEKVGALLKDHEDK 509
LPGG G+ +LS+S V +LK+ E++
Sbjct: 72 LPGGNLGAQNLSESAAVKEILKEQENR 98
>BC008188-1|AAH08188.1| 189|Homo sapiens Parkinson disease
(autosomal recessive, early onset) 7 protein.
Length = 189
Score = 93.1 bits (221), Expect = 7e-19
Identities = 46/87 (52%), Positives = 60/87 (68%)
Frame = +3
Query: 249 GCEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEALAEKQQYDAVI 428
G EEMETVI VD++RR G+ VT+AGL G PV CSR V + PD SL +A E YD V+
Sbjct: 13 GAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKE-GPYDVVV 71
Query: 429 LPGGLEGSDSLSKSEKVGALLKDHEDK 509
LPGG G+ +LS+S V +LK+ E++
Sbjct: 72 LPGGNLGAQNLSESAAVKEILKEQENR 98
>AL034417-1|CAB52550.1| 189|Homo sapiens Parkinson disease
(autosomal recessive, early onset) 7 protein.
Length = 189
Score = 93.1 bits (221), Expect = 7e-19
Identities = 46/87 (52%), Positives = 60/87 (68%)
Frame = +3
Query: 249 GCEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEALAEKQQYDAVI 428
G EEMETVI VD++RR G+ VT+AGL G PV CSR V + PD SL +A E YD V+
Sbjct: 13 GAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKE-GPYDVVV 71
Query: 429 LPGGLEGSDSLSKSEKVGALLKDHEDK 509
LPGG G+ +LS+S V +LK+ E++
Sbjct: 72 LPGGNLGAQNLSESAAVKEILKEQENR 98
>AF021819-1|AAC12806.1| 189|Homo sapiens RNA-binding protein
regulatory subunit protein.
Length = 189
Score = 93.1 bits (221), Expect = 7e-19
Identities = 46/87 (52%), Positives = 60/87 (68%)
Frame = +3
Query: 249 GCEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEALAEKQQYDAVI 428
G EEMETVI VD++RR G+ VT+AGL G PV CSR V + PD SL +A E YD V+
Sbjct: 13 GAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKE-GPYDVVV 71
Query: 429 LPGGLEGSDSLSKSEKVGALLKDHEDK 509
LPGG G+ +LS+S V +LK+ E++
Sbjct: 72 LPGGNLGAQNLSESAAVKEILKEQENR 98
>AB073864-1|BAB71782.1| 189|Homo sapiens DJ-1 protein.
Length = 189
Score = 93.1 bits (221), Expect = 7e-19
Identities = 46/87 (52%), Positives = 60/87 (68%)
Frame = +3
Query: 249 GCEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEALAEKQQYDAVI 428
G EEMETVI VD++RR G+ VT+AGL G PV CSR V + PD SL +A E YD V+
Sbjct: 13 GAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKE-GPYDVVV 71
Query: 429 LPGGLEGSDSLSKSEKVGALLKDHEDK 509
LPGG G+ +LS+S V +LK+ E++
Sbjct: 72 LPGGNLGAQNLSESAAVKEILKEQENR 98
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 31.5 bits (68), Expect = 2.6
Identities = 32/99 (32%), Positives = 38/99 (38%), Gaps = 3/99 (3%)
Frame = -1
Query: 580 APAPRHAVGCKRYGSSTNGSNDFPLSSWSLSRAPTF---SDLERLSDPSKPPGRITASYC 410
APAPR R GSS+ G P S S +P S R S P + T S
Sbjct: 1626 APAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPK-TKSRT 1684
Query: 409 CFSARASVSDLSGTRVTCLEHSTGDEPSKPARVTVTPPR 293
R+S S TR L + S P + TPPR
Sbjct: 1685 PPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPR 1723
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 31.5 bits (68), Expect = 2.6
Identities = 32/99 (32%), Positives = 38/99 (38%), Gaps = 3/99 (3%)
Frame = -1
Query: 580 APAPRHAVGCKRYGSSTNGSNDFPLSSWSLSRAPTF---SDLERLSDPSKPPGRITASYC 410
APAPR R GSS+ G P S S +P S R S P + T S
Sbjct: 658 APAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPK-TKSRT 716
Query: 409 CFSARASVSDLSGTRVTCLEHSTGDEPSKPARVTVTPPR 293
R+S S TR L + S P + TPPR
Sbjct: 717 PPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPR 755
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 31.5 bits (68), Expect = 2.6
Identities = 32/99 (32%), Positives = 38/99 (38%), Gaps = 3/99 (3%)
Frame = -1
Query: 580 APAPRHAVGCKRYGSSTNGSNDFPLSSWSLSRAPTF---SDLERLSDPSKPPGRITASYC 410
APAPR R GSS+ G P S S +P S R S P + T S
Sbjct: 1626 APAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPK-TKSRT 1684
Query: 409 CFSARASVSDLSGTRVTCLEHSTGDEPSKPARVTVTPPR 293
R+S S TR L + S P + TPPR
Sbjct: 1685 PPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPR 1723
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 31.5 bits (68), Expect = 2.6
Identities = 32/99 (32%), Positives = 38/99 (38%), Gaps = 3/99 (3%)
Frame = -1
Query: 580 APAPRHAVGCKRYGSSTNGSNDFPLSSWSLSRAPTF---SDLERLSDPSKPPGRITASYC 410
APAPR R GSS+ G P S S +P S R S P + T S
Sbjct: 149 APAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPK-TKSRT 207
Query: 409 CFSARASVSDLSGTRVTCLEHSTGDEPSKPARVTVTPPR 293
R+S S TR L + S P + TPPR
Sbjct: 208 PPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPR 246
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.5 bits (68), Expect = 2.6
Identities = 32/99 (32%), Positives = 38/99 (38%), Gaps = 3/99 (3%)
Frame = -1
Query: 580 APAPRHAVGCKRYGSSTNGSNDFPLSSWSLSRAPTF---SDLERLSDPSKPPGRITASYC 410
APAPR R GSS+ G P S S +P S R S P + T S
Sbjct: 1674 APAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPK-TKSRT 1732
Query: 409 CFSARASVSDLSGTRVTCLEHSTGDEPSKPARVTVTPPR 293
R+S S TR L + S P + TPPR
Sbjct: 1733 PPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPR 1771
>AL133227-3|CAI40553.1| 196|Homo sapiens solute carrier family 35,
member C2 protein.
Length = 196
Score = 30.3 bits (65), Expect = 5.9
Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 3/20 (15%)
Frame = -3
Query: 611 ACPWCWGMTSR---AGPSPR 561
A PWCWG S AGPSPR
Sbjct: 120 ASPWCWGPRSSVAFAGPSPR 139
>D87119-1|BAA13250.1| 343|Homo sapiens GS3955 protein.
Length = 343
Score = 29.9 bits (64), Expect = 7.8
Identities = 25/75 (33%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = -1
Query: 547 RYGSSTNGSNDFPLSSWSLSRAPTFSDLERLSDPSKPPGRITASYC--CFSARASVSDLS 374
RYG S N + DF S S P+ S L PS PP S+C C + L
Sbjct: 13 RYGRSRNKTQDFEELSSIRSAEPSQSFSPNLGSPS-PPETPNLSHCVSCIGKYLLLEPLE 71
Query: 373 GTRVTCLEH-STGDE 332
G V H +G+E
Sbjct: 72 GDHVFRAVHLHSGEE 86
>BC002637-1|AAH02637.1| 343|Homo sapiens tribbles homolog 2
(Drosophila) protein.
Length = 343
Score = 29.9 bits (64), Expect = 7.8
Identities = 25/75 (33%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = -1
Query: 547 RYGSSTNGSNDFPLSSWSLSRAPTFSDLERLSDPSKPPGRITASYC--CFSARASVSDLS 374
RYG S N + DF S S P+ S L PS PP S+C C + L
Sbjct: 13 RYGRSRNKTQDFEELSSIRSAEPSQSFSPNLGSPS-PPETPNLSHCVSCIGKYLLLEPLE 71
Query: 373 GTRVTCLEH-STGDE 332
G V H +G+E
Sbjct: 72 GDHVFRAVHLHSGEE 86
>AY245544-1|AAO89231.1| 343|Homo sapiens TRB2 protein protein.
Length = 343
Score = 29.9 bits (64), Expect = 7.8
Identities = 25/75 (33%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = -1
Query: 547 RYGSSTNGSNDFPLSSWSLSRAPTFSDLERLSDPSKPPGRITASYC--CFSARASVSDLS 374
RYG S N + DF S S P+ S L PS PP S+C C + L
Sbjct: 13 RYGRSRNKTQDFEELSSIRSAEPSQSFSPNLGSPS-PPETPNLSHCVSCIGKYLLLEPLE 71
Query: 373 GTRVTCLEH-STGDE 332
G V H +G+E
Sbjct: 72 GDHVFRAVHLHSGEE 86
>AC009486-1|AAY15015.1| 343|Homo sapiens unknown protein.
Length = 343
Score = 29.9 bits (64), Expect = 7.8
Identities = 25/75 (33%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = -1
Query: 547 RYGSSTNGSNDFPLSSWSLSRAPTFSDLERLSDPSKPPGRITASYC--CFSARASVSDLS 374
RYG S N + DF S S P+ S L PS PP S+C C + L
Sbjct: 13 RYGRSRNKTQDFEELSSIRSAEPSQSFSPNLGSPS-PPETPNLSHCVSCIGKYLLLEPLE 71
Query: 373 GTRVTCLEH-STGDE 332
G V H +G+E
Sbjct: 72 GDHVFRAVHLHSGEE 86
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,358,497
Number of Sequences: 237096
Number of extensions: 1675064
Number of successful extensions: 3920
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3915
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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