Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40746
         (702 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               25   0.92 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   3.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   4.9  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   4.9  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   6.5  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   6.5  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +1

Query: 37 LFNNFRFKFVLLLCFLHMYF 96
          +F N+ F F+L++  + +YF
Sbjct: 1  MFKNYHFFFILVITLIFLYF 20


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 237 DHNYTSIYLTSENRTSRKTFL 175
           D+NYT  YL   ++   KTF+
Sbjct: 56  DYNYTMNYLLDTDQWGDKTFV 76


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 660 IILYKHYFYLFITIKSTEILVRTGS 586
           ++  + YFYLF+ +    + +R GS
Sbjct: 532 MVYLQKYFYLFMEMDRFAVTLRPGS 556


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 660 IILYKHYFYLFITIKSTEILVRTGS 586
           ++  + YFYLF+ +    + +R GS
Sbjct: 532 MVYLQKYFYLFMEMDRFAVTLRPGS 556


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 55  NGNY*TIYCSKSRILY 8
           N NY  +YC+  R LY
Sbjct: 93  NNNYKKLYCNNYRKLY 108


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 682 NTRFILINYLIQTLFLFIYYH 620
           +T FILINY     F+F+Y++
Sbjct: 13  STSFILINY-----FIFLYFN 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,434
Number of Sequences: 438
Number of extensions: 2813
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)