Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40739
(727 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47087-1|CAA87392.1| 163|Homo sapiens RNA polymerase II elongat... 167 4e-41
U37558-1|AAA79202.1| 150|Homo sapiens OCP2 protein. 167 4e-41
U33760-1|AAC50241.1| 163|Homo sapiens cyclin A/CDK2-associated ... 167 4e-41
BC065730-1|AAH65730.1| 163|Homo sapiens S-phase kinase-associat... 167 4e-41
BC025673-1|AAH25673.1| 160|Homo sapiens S-phase kinase-associat... 167 4e-41
BC020798-1|AAH20798.1| 163|Homo sapiens S-phase kinase-associat... 167 4e-41
BC009839-1|AAH09839.1| 163|Homo sapiens S-phase kinase-associat... 167 4e-41
L49176-1|AAB50032.1| 47|Homo sapiens OCP2 protein. 89 2e-17
L49170-1|AAB50264.1| 47|Homo sapiens OCP2 protein. 89 2e-17
L49173-1|AAB50265.1| 47|Homo sapiens OCP2 protein. 82 2e-15
L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated pr... 30 7.3
>Z47087-1|CAA87392.1| 163|Homo sapiens RNA polymerase II elongation
factor-like protein protein.
Length = 163
Score = 167 bits (406), Expect = 4e-41
Identities = 77/92 (83%), Positives = 83/92 (90%)
Frame = +2
Query: 254 HSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYL 433
++AILKKVIQW T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYL
Sbjct: 51 NAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYL 110
Query: 434 DIKGLLDVTCKTVANMIKGKTPEEIVKRSTLR 529
DIKGLLDVTCKTVANMIKGKTPEEI K ++
Sbjct: 111 DIKGLLDVTCKTVANMIKGKTPEEIRKTFNIK 142
Score = 57.2 bits (132), Expect = 6e-08
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1
Query: 508 RKTFNIKNDFTAAEEDQVRKENEWCEEK 591
RKTFNIKNDFT EE QVRKEN+WCEEK
Sbjct: 136 RKTFNIKNDFTEEEEAQVRKENQWCEEK 163
Score = 50.0 bits (114), Expect = 8e-06
Identities = 31/58 (53%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 108 MPNIKLQSSDNEAFVVDVEIAKCSVTIKT-XXXXXXXXXXXXXXXPLPNVILQYSKKL 278
MP+IKLQSSD E F VDVEIAK SVTIKT PLPNV KK+
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKV 58
>U37558-1|AAA79202.1| 150|Homo sapiens OCP2 protein.
Length = 150
Score = 167 bits (406), Expect = 4e-41
Identities = 77/92 (83%), Positives = 83/92 (90%)
Frame = +2
Query: 254 HSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYL 433
++AILKKVIQW T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYL
Sbjct: 38 NAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYL 97
Query: 434 DIKGLLDVTCKTVANMIKGKTPEEIVKRSTLR 529
DIKGLLDVTCKTVANMIKGKTPEEI K ++
Sbjct: 98 DIKGLLDVTCKTVANMIKGKTPEEIRKTFNIK 129
Score = 57.2 bits (132), Expect = 6e-08
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1
Query: 508 RKTFNIKNDFTAAEEDQVRKENEWCEEK 591
RKTFNIKNDFT EE QVRKEN+WCEEK
Sbjct: 123 RKTFNIKNDFTEEEEAQVRKENQWCEEK 150
Score = 30.3 bits (65), Expect = 7.3
Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 147 FVVDVEIAKCSVTIKT-XXXXXXXXXXXXXXXPLPNVILQYSKKL 278
F VDVEIAK SVTIKT PLPNV KK+
Sbjct: 1 FEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKV 45
>U33760-1|AAC50241.1| 163|Homo sapiens cyclin A/CDK2-associated p19
protein.
Length = 163
Score = 167 bits (406), Expect = 4e-41
Identities = 77/92 (83%), Positives = 83/92 (90%)
Frame = +2
Query: 254 HSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYL 433
++AILKKVIQW T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYL
Sbjct: 51 NAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYL 110
Query: 434 DIKGLLDVTCKTVANMIKGKTPEEIVKRSTLR 529
DIKGLLDVTCKTVANMIKGKTPEEI K ++
Sbjct: 111 DIKGLLDVTCKTVANMIKGKTPEEIRKTFNIK 142
Score = 57.2 bits (132), Expect = 6e-08
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1
Query: 508 RKTFNIKNDFTAAEEDQVRKENEWCEEK 591
RKTFNIKNDFT EE QVRKEN+WCEEK
Sbjct: 136 RKTFNIKNDFTEEEEAQVRKENQWCEEK 163
Score = 50.0 bits (114), Expect = 8e-06
Identities = 31/58 (53%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 108 MPNIKLQSSDNEAFVVDVEIAKCSVTIKT-XXXXXXXXXXXXXXXPLPNVILQYSKKL 278
MP+IKLQSSD E F VDVEIAK SVTIKT PLPNV KK+
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKV 58
>BC065730-1|AAH65730.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 167 bits (406), Expect = 4e-41
Identities = 77/92 (83%), Positives = 83/92 (90%)
Frame = +2
Query: 254 HSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYL 433
++AILKKVIQW T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYL
Sbjct: 51 NAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYL 110
Query: 434 DIKGLLDVTCKTVANMIKGKTPEEIVKRSTLR 529
DIKGLLDVTCKTVANMIKGKTPEEI K ++
Sbjct: 111 DIKGLLDVTCKTVANMIKGKTPEEIRKTFNIK 142
Score = 57.2 bits (132), Expect = 6e-08
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1
Query: 508 RKTFNIKNDFTAAEEDQVRKENEWCEEK 591
RKTFNIKNDFT EE QVRKEN+WCEEK
Sbjct: 136 RKTFNIKNDFTEEEEAQVRKENQWCEEK 163
Score = 50.0 bits (114), Expect = 8e-06
Identities = 31/58 (53%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 108 MPNIKLQSSDNEAFVVDVEIAKCSVTIKT-XXXXXXXXXXXXXXXPLPNVILQYSKKL 278
MP+IKLQSSD E F VDVEIAK SVTIKT PLPNV KK+
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKV 58
>BC025673-1|AAH25673.1| 160|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 160
Score = 167 bits (406), Expect = 4e-41
Identities = 77/92 (83%), Positives = 83/92 (90%)
Frame = +2
Query: 254 HSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYL 433
++AILKKVIQW T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYL
Sbjct: 51 NAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYL 110
Query: 434 DIKGLLDVTCKTVANMIKGKTPEEIVKRSTLR 529
DIKGLLDVTCKTVANMIKGKTPEEI K ++
Sbjct: 111 DIKGLLDVTCKTVANMIKGKTPEEIRKTFNIK 142
Score = 50.0 bits (114), Expect = 8e-06
Identities = 31/58 (53%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 108 MPNIKLQSSDNEAFVVDVEIAKCSVTIKT-XXXXXXXXXXXXXXXPLPNVILQYSKKL 278
MP+IKLQSSD E F VDVEIAK SVTIKT PLPNV KK+
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKV 58
Score = 33.9 bits (74), Expect = 0.60
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +1
Query: 508 RKTFNIKNDFTAAEEDQV 561
RKTFNIKNDFT EE QV
Sbjct: 136 RKTFNIKNDFTEEEEAQV 153
>BC020798-1|AAH20798.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 167 bits (406), Expect = 4e-41
Identities = 77/92 (83%), Positives = 83/92 (90%)
Frame = +2
Query: 254 HSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYL 433
++AILKKVIQW T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYL
Sbjct: 51 NAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYL 110
Query: 434 DIKGLLDVTCKTVANMIKGKTPEEIVKRSTLR 529
DIKGLLDVTCKTVANMIKGKTPEEI K ++
Sbjct: 111 DIKGLLDVTCKTVANMIKGKTPEEIRKTFNIK 142
Score = 57.2 bits (132), Expect = 6e-08
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1
Query: 508 RKTFNIKNDFTAAEEDQVRKENEWCEEK 591
RKTFNIKNDFT EE QVRKEN+WCEEK
Sbjct: 136 RKTFNIKNDFTEEEEAQVRKENQWCEEK 163
Score = 50.0 bits (114), Expect = 8e-06
Identities = 31/58 (53%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 108 MPNIKLQSSDNEAFVVDVEIAKCSVTIKT-XXXXXXXXXXXXXXXPLPNVILQYSKKL 278
MP+IKLQSSD E F VDVEIAK SVTIKT PLPNV KK+
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKV 58
>BC009839-1|AAH09839.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 167 bits (406), Expect = 4e-41
Identities = 77/92 (83%), Positives = 83/92 (90%)
Frame = +2
Query: 254 HSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYL 433
++AILKKVIQW T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYL
Sbjct: 51 NAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYL 110
Query: 434 DIKGLLDVTCKTVANMIKGKTPEEIVKRSTLR 529
DIKGLLDVTCKTVANMIKGKTPEEI K ++
Sbjct: 111 DIKGLLDVTCKTVANMIKGKTPEEIRKTFNIK 142
Score = 57.2 bits (132), Expect = 6e-08
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1
Query: 508 RKTFNIKNDFTAAEEDQVRKENEWCEEK 591
RKTFNIKNDFT EE QVRKEN+WCEEK
Sbjct: 136 RKTFNIKNDFTEEEEAQVRKENQWCEEK 163
Score = 50.0 bits (114), Expect = 8e-06
Identities = 31/58 (53%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 108 MPNIKLQSSDNEAFVVDVEIAKCSVTIKT-XXXXXXXXXXXXXXXPLPNVILQYSKKL 278
MP+IKLQSSD E F VDVEIAK SVTIKT PLPNV KK+
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKV 58
>L49176-1|AAB50032.1| 47|Homo sapiens OCP2 protein.
Length = 47
Score = 88.6 bits (210), Expect = 2e-17
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +2
Query: 332 NKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 472
NKEK+TDDI WD +FLKV QGTLFELILAANYLDIKGLLDVTCKTV
Sbjct: 1 NKEKQTDDIPVWDQEFLKVAQGTLFELILAANYLDIKGLLDVTCKTV 47
>L49170-1|AAB50264.1| 47|Homo sapiens OCP2 protein.
Length = 47
Score = 88.6 bits (210), Expect = 2e-17
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +2
Query: 332 NKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 472
NKEK+TDDI WD +FLKV QGTLFELILAANYLDIKGLLDVTCKTV
Sbjct: 1 NKEKQTDDIPVWDQEFLKVAQGTLFELILAANYLDIKGLLDVTCKTV 47
>L49173-1|AAB50265.1| 47|Homo sapiens OCP2 protein.
Length = 47
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +2
Query: 332 NKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 472
N+EKRTD I +WD FLK+D GTLFE+ILAANYLDIKGLLDV CKTV
Sbjct: 1 NEEKRTDAIPAWDQKFLKIDPGTLFEVILAANYLDIKGLLDVPCKTV 47
>L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated protein
1B protein.
Length = 2468
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 290 TY-HKDDPPLPEDDENKEKRTDDISSWDADFLKVDQ 394
TY H D PP P D + R D+S D + L ++Q
Sbjct: 2194 TYKHMDPPPAPVQDRSPSPRHPDVSMVDPEALAIEQ 2229
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,966,265
Number of Sequences: 237096
Number of extensions: 1964023
Number of successful extensions: 3704
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3703
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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