Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40728
(725 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032571-1|AAH32571.1| 600|Homo sapiens RUN and FYVE domain con... 34 0.45
AK025904-1|BAB15276.1| 310|Homo sapiens protein ( Homo sapiens ... 34 0.45
AF361055-1|AAK50771.1| 600|Homo sapiens RUFY1 protein. 34 0.45
AF312367-1|AAQ14554.1| 708|Homo sapiens La binding protein 1 pr... 34 0.45
DQ993200-1|ABJ97705.1| 1104|Homo sapiens extended-synaptotagmin ... 31 3.2
BC004998-1|AAH04998.1| 1104|Homo sapiens family with sequence si... 31 3.2
BC000608-1|AAH00608.1| 209|Homo sapiens ANP32A protein protein. 31 3.2
AK025463-1|BAB15139.1| 868|Homo sapiens gp96. protein. 31 3.2
AB018290-1|BAA34467.1| 1072|Homo sapiens KIAA0747 protein protein. 31 3.2
BC034491-1|AAH34491.1| 406|Homo sapiens chromosome 12 open read... 31 4.2
BC027600-1|AAH27600.1| 406|Homo sapiens chromosome 12 open read... 31 4.2
BC026075-1|AAH26075.1| 406|Homo sapiens chromosome 12 open read... 31 4.2
BC024183-1|AAH24183.1| 406|Homo sapiens chromosome 12 open read... 31 4.2
X98494-1|CAA67120.1| 672|Homo sapiens M phase phosphoprotein 10... 30 7.3
U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon ca... 30 7.3
S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon ca... 30 7.3
L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon, c... 30 7.3
D64159-1|BAA21515.1| 709|Homo sapiens hypothetical protein prot... 30 7.3
BC132736-1|AAI32737.1| 1843|Homo sapiens coiled-coil domain cont... 30 7.3
BC126389-1|AAI26390.1| 681|Homo sapiens M-phase phosphoprotein ... 30 7.3
BC117263-1|AAI17264.1| 1069|Homo sapiens SLC24A1 protein protein. 30 7.3
BC104870-1|AAI04871.1| 89|Homo sapiens PSORS1C1 protein protein. 30 7.3
BC087613-1|AAH87613.1| 797|Homo sapiens POLE protein protein. 30 7.3
BC078168-1|AAH78168.1| 887|Homo sapiens CCDC88A protein protein. 30 7.3
BC023667-1|AAH23667.1| 501|Homo sapiens iroquois homeobox prote... 30 7.3
BC021559-1|AAH21559.1| 370|Homo sapiens POLE protein protein. 30 7.3
BC007599-1|AAH07599.1| 797|Homo sapiens Unknown (protein for IM... 30 7.3
BA000025-62|BAB63314.1| 104|Homo sapiens SEEK1 protein. 30 7.3
AY335943-1|AAQ16549.1| 501|Homo sapiens homeodomain protein IRX... 30 7.3
AY335942-1|AAQ16548.1| 501|Homo sapiens homeodomain protein IRX... 30 7.3
AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directe... 30 7.3
AL773544-3|CAI18480.1| 104|Homo sapiens psoriasis susceptibilit... 30 7.3
AL662867-3|CAI17720.1| 152|Homo sapiens psoriasis susceptibilit... 30 7.3
AL662844-3|CAI18324.1| 152|Homo sapiens psoriasis susceptibilit... 30 7.3
AK025087-1|BAB15063.1| 370|Homo sapiens protein ( Homo sapiens ... 30 7.3
AF484419-1|AAO49376.1| 101|Homo sapiens psoriasis susceptibilit... 30 7.3
AF484418-1|AAO49375.1| 152|Homo sapiens psoriasis susceptibilit... 30 7.3
AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon ... 30 7.3
AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon ... 30 7.3
AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon ... 30 7.3
AF112218-1|AAF17206.1| 742|Homo sapiens unknown protein. 30 7.3
AF062922-1|AAC77912.1| 1099|Homo sapiens retinal rod Na-Ca+K exc... 30 7.3
AF062921-1|AAC16732.1| 1099|Homo sapiens retinal rod Na-Ca+K exc... 30 7.3
AF026132-1|AAB97832.1| 1081|Homo sapiens retinal rod Na+/Ca+, K+... 30 7.3
AB202103-3|BAE78626.1| 152|Homo sapiens chromosome 6 open readi... 30 7.3
AB201172-1|BAE44387.1| 1870|Homo sapiens girdin protein. 30 7.3
AB125644-1|BAF44475.1| 1843|Homo sapiens PKB/Akt-binding protein... 30 7.3
AB088114-4|BAC54950.1| 104|Homo sapiens hypothetical protein pr... 30 7.3
AB031479-1|BAA88130.1| 152|Homo sapiens SEEK1 protein. 30 7.3
AB014602-1|BAA31677.2| 988|Homo sapiens KIAA0702 protein protein. 30 7.3
>BC032571-1|AAH32571.1| 600|Homo sapiens RUN and FYVE domain
containing 1 protein.
Length = 600
Score = 34.3 bits (75), Expect = 0.45
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 546 LKNNKELLQAEKTAQDQKCEKSENLVQENGCHDIQTR-KLEDISDI 680
LK LQ EK + CE+ E +QE G H Q++ K+EDI ++
Sbjct: 477 LKKELRELQDEKAELQKICEEQEQALQEMGLHLSQSKLKMEDIKEV 522
>AK025904-1|BAB15276.1| 310|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22251 fis, clone HRC02686. ).
Length = 310
Score = 34.3 bits (75), Expect = 0.45
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 546 LKNNKELLQAEKTAQDQKCEKSENLVQENGCHDIQTR-KLEDISDI 680
LK LQ EK + CE+ E +QE G H Q++ K+EDI ++
Sbjct: 187 LKKELRELQDEKAELQKICEEQEQALQEMGLHLSQSKLKMEDIKEV 232
>AF361055-1|AAK50771.1| 600|Homo sapiens RUFY1 protein.
Length = 600
Score = 34.3 bits (75), Expect = 0.45
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 546 LKNNKELLQAEKTAQDQKCEKSENLVQENGCHDIQTR-KLEDISDI 680
LK LQ EK + CE+ E +QE G H Q++ K+EDI ++
Sbjct: 477 LKKELRELQDEKAELQKICEEQEQALQEMGLHLSQSKLKMEDIKEV 522
>AF312367-1|AAQ14554.1| 708|Homo sapiens La binding protein 1
protein.
Length = 708
Score = 34.3 bits (75), Expect = 0.45
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 546 LKNNKELLQAEKTAQDQKCEKSENLVQENGCHDIQTR-KLEDISDI 680
LK LQ EK + CE+ E +QE G H Q++ K+EDI ++
Sbjct: 585 LKKELRELQDEKAELQKICEEQEQALQEMGLHLSQSKLKMEDIKEV 630
>DQ993200-1|ABJ97705.1| 1104|Homo sapiens extended-synaptotagmin 1
protein.
Length = 1104
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +1
Query: 394 LGVDWASLVADVRRREQTTPTSGGVSWRPERVLARVGLLYI 516
L ++W SL++D + EQ + GVS RP+ A + ++Y+
Sbjct: 444 LRLEWLSLLSDAEKLEQVLQWNWGVSSRPDPPSAAILVVYL 484
>BC004998-1|AAH04998.1| 1104|Homo sapiens family with sequence
similarity 62 (C2 domain containing), member A protein.
Length = 1104
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +1
Query: 394 LGVDWASLVADVRRREQTTPTSGGVSWRPERVLARVGLLYI 516
L ++W SL++D + EQ + GVS RP+ A + ++Y+
Sbjct: 444 LRLEWLSLLSDAEKLEQVLQWNWGVSSRPDPPSAAILVVYL 484
>BC000608-1|AAH00608.1| 209|Homo sapiens ANP32A protein protein.
Length = 209
Score = 31.5 bits (68), Expect = 3.2
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 259 DASAVGDEKEIQDNKDDEDVANLDFEEISDGELEEEKTR 375
D+ A G + + D ++DED D E +DGE+++E+ +
Sbjct: 157 DSDAEGYVEGLDDEEEDEDEEEYDEEGYNDGEVDDEEDK 195
>AK025463-1|BAB15139.1| 868|Homo sapiens gp96. protein.
Length = 868
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +1
Query: 394 LGVDWASLVADVRRREQTTPTSGGVSWRPERVLARVGLLYI 516
L ++W SL++D + EQ + GVS RP+ A + ++Y+
Sbjct: 208 LRLEWLSLLSDAEKLEQVLQWNWGVSSRPDPPSAAILVVYL 248
>AB018290-1|BAA34467.1| 1072|Homo sapiens KIAA0747 protein protein.
Length = 1072
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +1
Query: 394 LGVDWASLVADVRRREQTTPTSGGVSWRPERVLARVGLLYI 516
L ++W SL++D + EQ + GVS RP+ A + ++Y+
Sbjct: 402 LRLEWLSLLSDAEKLEQVLQWNWGVSSRPDPPSAAILVVYL 442
>BC034491-1|AAH34491.1| 406|Homo sapiens chromosome 12 open reading
frame 12 protein.
Length = 406
Score = 31.1 bits (67), Expect = 4.2
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +1
Query: 244 KSVRQDASAVGDEKEIQDNKDDEDVANLDFEEISDGELEEEK 369
K ++ V DE+E +++++E+V ++ E + ELEEE+
Sbjct: 298 KEASEEEEEVEDEEEEVEDEEEEEVEEAEYVEEGEEELEEEE 339
>BC027600-1|AAH27600.1| 406|Homo sapiens chromosome 12 open reading
frame 12 protein.
Length = 406
Score = 31.1 bits (67), Expect = 4.2
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +1
Query: 244 KSVRQDASAVGDEKEIQDNKDDEDVANLDFEEISDGELEEEK 369
K ++ V DE+E +++++E+V ++ E + ELEEE+
Sbjct: 298 KEASEEEEEVEDEEEEVEDEEEEEVEEAEYVEEGEEELEEEE 339
>BC026075-1|AAH26075.1| 406|Homo sapiens chromosome 12 open reading
frame 12 protein.
Length = 406
Score = 31.1 bits (67), Expect = 4.2
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +1
Query: 244 KSVRQDASAVGDEKEIQDNKDDEDVANLDFEEISDGELEEEK 369
K ++ V DE+E +++++E+V ++ E + ELEEE+
Sbjct: 298 KEASEEEEEVEDEEEEVEDEEEEEVEEAEYVEEGEEELEEEE 339
>BC024183-1|AAH24183.1| 406|Homo sapiens chromosome 12 open reading
frame 12 protein.
Length = 406
Score = 31.1 bits (67), Expect = 4.2
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +1
Query: 244 KSVRQDASAVGDEKEIQDNKDDEDVANLDFEEISDGELEEEK 369
K ++ V DE+E +++++E+V ++ E + ELEEE+
Sbjct: 298 KEASEEEEEVEDEEEEVEDEEEEEVEEAEYVEEGEEELEEEE 339
>X98494-1|CAA67120.1| 672|Homo sapiens M phase phosphoprotein 10
protein.
Length = 672
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +1
Query: 256 QDASAVGDEKEIQDNKDDEDVANLDFEEISDGELEEE 366
+D + V D+ E+ NK+D+++A + EE+S E +E+
Sbjct: 268 EDITNVHDD-ELDSNKEDDEIAEEEAEELSISETDED 303
>U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon
catalytic subunit protein.
Length = 2285
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 256 QDASAVGDEKEIQDNKDDEDVANLDFEEISDGELEEEKTRAGLGDALGVDW 408
QD+ G ++ Q+N+DDE E DGE EEE + + D L +W
Sbjct: 1937 QDSQKAGGAEDEQENEDDE--------EERDGEEEEEAEESNVEDLLENNW 1979
>S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon
catalytic subunit protein.
Length = 2257
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 256 QDASAVGDEKEIQDNKDDEDVANLDFEEISDGELEEEKTRAGLGDALGVDW 408
QD+ G ++ Q+N+DDE E DGE EEE + + D L +W
Sbjct: 1909 QDSQKAGGAEDEQENEDDE--------EERDGEEEEEAEESNVEDLLENNW 1951
>L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon,
catalytic polypeptide protein.
Length = 2286
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 256 QDASAVGDEKEIQDNKDDEDVANLDFEEISDGELEEEKTRAGLGDALGVDW 408
QD+ G ++ Q+N+DDE E DGE EEE + + D L +W
Sbjct: 1938 QDSQKAGGAEDEQENEDDE--------EERDGEEEEEAEESNVEDLLENNW 1980
>D64159-1|BAA21515.1| 709|Homo sapiens hypothetical protein
protein.
Length = 709
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 546 LKNNKELLQAEKTAQDQKCEKSENLVQENGCHDIQTRKLEDISD 677
L+ ELLQ + T CEK E L QEN + + RKL+ D
Sbjct: 562 LEKENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLD 605
>BC132736-1|AAI32737.1| 1843|Homo sapiens coiled-coil domain
containing 88A protein.
Length = 1843
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 546 LKNNKELLQAEKTAQDQKCEKSENLVQENGCHDIQTRKLEDISD 677
L+ ELLQ + T CEK E L QEN + + RKL+ D
Sbjct: 637 LEKENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLD 680
>BC126389-1|AAI26390.1| 681|Homo sapiens M-phase phosphoprotein 10
(U3 small nucleolar ribonucleoprotein) protein.
Length = 681
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +1
Query: 256 QDASAVGDEKEIQDNKDDEDVANLDFEEISDGELEEE 366
+D + V D+ E+ NK+D+++A + EE+S E +E+
Sbjct: 277 EDITNVHDD-ELDSNKEDDEIAEEEAEELSISETDED 312
>BC117263-1|AAI17264.1| 1069|Homo sapiens SLC24A1 protein protein.
Length = 1069
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +1
Query: 274 GDEKEIQDNKDDEDVANLDFEEISDGELEEEKTRAGLGDALGVDW 408
GD +E ++ +++++ + E+ + E EEE+ G + L +DW
Sbjct: 857 GDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDW 901
>BC104870-1|AAI04871.1| 89|Homo sapiens PSORS1C1 protein protein.
Length = 89
Score = 30.3 bits (65), Expect = 7.3
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 533 QIFTSQMYKRPTRASTLSGRQLTPPLVGVVCSRRRTSA-TKLAQSTPSASP 384
++F S + P A+ L Q PP G+ S RT A T L S PS SP
Sbjct: 32 ELFASVLPMAPEEAARLQQPQPLPPPSGIHLSASRTLAPTLLYSSPPSHSP 82
>BC087613-1|AAH87613.1| 797|Homo sapiens POLE protein protein.
Length = 797
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 256 QDASAVGDEKEIQDNKDDEDVANLDFEEISDGELEEEKTRAGLGDALGVDW 408
QD+ G ++ Q+N+DDE E DGE EEE + + D L +W
Sbjct: 449 QDSQKAGGAEDEQENEDDE--------EERDGEEEEEAEESNVEDLLENNW 491
>BC078168-1|AAH78168.1| 887|Homo sapiens CCDC88A protein protein.
Length = 887
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 546 LKNNKELLQAEKTAQDQKCEKSENLVQENGCHDIQTRKLEDISD 677
L+ ELLQ + T CEK E L QEN + + RKL+ D
Sbjct: 634 LEKENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLD 677
>BC023667-1|AAH23667.1| 501|Homo sapiens iroquois homeobox protein
3 protein.
Length = 501
Score = 30.3 bits (65), Expect = 7.3
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 241 RKSVRQDASAVGDEKEIQDNKDDED--VANLDFEEISDGELEEEKTRAGLGD 390
R ++ +A G E+E +D ++DE+ L+ EE G EE+ GL D
Sbjct: 196 RSRTDEEGNAYGSEREEEDEEEDEEDGKRELELEEEELGGEEEDTGGEGLAD 247
>BC021559-1|AAH21559.1| 370|Homo sapiens POLE protein protein.
Length = 370
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 256 QDASAVGDEKEIQDNKDDEDVANLDFEEISDGELEEEKTRAGLGDALGVDW 408
QD+ G ++ Q+N+DDE E DGE EEE + + D L +W
Sbjct: 22 QDSQKAGGAEDEQENEDDE--------EERDGEEEEEAEESNVEDLLENNW 64
>BC007599-1|AAH07599.1| 797|Homo sapiens Unknown (protein for
IMAGE:3347229) protein.
Length = 797
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 256 QDASAVGDEKEIQDNKDDEDVANLDFEEISDGELEEEKTRAGLGDALGVDW 408
QD+ G ++ Q+N+DDE E DGE EEE + + D L +W
Sbjct: 449 QDSQKAGGAEDEQENEDDE--------EERDGEEEEEAEESNVEDLLENNW 491
>BA000025-62|BAB63314.1| 104|Homo sapiens SEEK1 protein.
Length = 104
Score = 30.3 bits (65), Expect = 7.3
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 533 QIFTSQMYKRPTRASTLSGRQLTPPLVGVVCSRRRTSA-TKLAQSTPSASP 384
++F S + P A+ L Q PP G+ S RT A T L S PS SP
Sbjct: 47 ELFASVLPMAPEEAARLQQPQPLPPPSGIHLSASRTLAPTLLYSSPPSHSP 97
>AY335943-1|AAQ16549.1| 501|Homo sapiens homeodomain protein IRXB1
protein.
Length = 501
Score = 30.3 bits (65), Expect = 7.3
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 241 RKSVRQDASAVGDEKEIQDNKDDED--VANLDFEEISDGELEEEKTRAGLGD 390
R ++ +A G E+E +D ++DE+ L+ EE G EE+ GL D
Sbjct: 196 RSRTDEEGNAYGSEREEEDEEEDEEDCKRELELEEEELGGEEEDTGGEGLAD 247
>AY335942-1|AAQ16548.1| 501|Homo sapiens homeodomain protein IRXB1
protein.
Length = 501
Score = 30.3 bits (65), Expect = 7.3
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 241 RKSVRQDASAVGDEKEIQDNKDDED--VANLDFEEISDGELEEEKTRAGLGD 390
R ++ +A G E+E +D ++DE+ L+ EE G EE+ GL D
Sbjct: 196 RSRTDEEGNAYGSEREEEDEEEDEEDGKRELELEEEELGGEEEDTGGEGLAD 247
>AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directed),
epsilon protein.
Length = 2265
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 256 QDASAVGDEKEIQDNKDDEDVANLDFEEISDGELEEEKTRAGLGDALGVDW 408
QD+ G ++ Q+N+DDE E DGE EEE + + D L +W
Sbjct: 1917 QDSQKAGGAEDEQENEDDE--------EERDGEEEEEAEESNVEDLLENNW 1959
>AL773544-3|CAI18480.1| 104|Homo sapiens psoriasis susceptibility 1
candidate 1 protein.
Length = 104
Score = 30.3 bits (65), Expect = 7.3
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 533 QIFTSQMYKRPTRASTLSGRQLTPPLVGVVCSRRRTSA-TKLAQSTPSASP 384
++F S + P A+ L Q PP G+ S RT A T L S PS SP
Sbjct: 47 ELFASVLPMAPEEAARLQQPQPLPPPSGIHLSASRTLALTLLYSSPPSHSP 97
>AL662867-3|CAI17720.1| 152|Homo sapiens psoriasis susceptibility 1
candidate 1 protein.
Length = 152
Score = 30.3 bits (65), Expect = 7.3
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 533 QIFTSQMYKRPTRASTLSGRQLTPPLVGVVCSRRRTSA-TKLAQSTPSASP 384
++F S + P A+ L Q PP G+ S RT A T L S PS SP
Sbjct: 95 ELFASVLPMAPEEAARLQQPQPLPPPSGIHLSASRTLAPTLLYSSPPSHSP 145
>AL662844-3|CAI18324.1| 152|Homo sapiens psoriasis susceptibility 1
candidate 1 protein.
Length = 152
Score = 30.3 bits (65), Expect = 7.3
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 533 QIFTSQMYKRPTRASTLSGRQLTPPLVGVVCSRRRTSA-TKLAQSTPSASP 384
++F S + P A+ L Q PP G+ S RT A T L S PS SP
Sbjct: 95 ELFASVLPMAPEEAARLQQPQPLPPPSGIHLSASRTLAPTLLYSSPPSHSP 145
>AK025087-1|BAB15063.1| 370|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21434 fis, clone COL04242. ).
Length = 370
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 256 QDASAVGDEKEIQDNKDDEDVANLDFEEISDGELEEEKTRAGLGDALGVDW 408
QD+ G ++ Q+N+DDE E DGE EEE + + D L +W
Sbjct: 22 QDSQKAGGAEDEQENEDDE--------EERDGEEEEEAEESNVEDLLENNW 64
>AF484419-1|AAO49376.1| 101|Homo sapiens psoriasis susceptibility 1
candidate 1 protein.
Length = 101
Score = 30.3 bits (65), Expect = 7.3
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 533 QIFTSQMYKRPTRASTLSGRQLTPPLVGVVCSRRRTSA-TKLAQSTPSASP 384
++F S + P A+ L Q PP G+ S RT A T L S PS SP
Sbjct: 44 ELFASVLPMAPEEAARLQQPQPLPPPSGIHLSASRTLAPTLLYSSPPSHSP 94
>AF484418-1|AAO49375.1| 152|Homo sapiens psoriasis susceptibility 1
candidate 1 protein.
Length = 152
Score = 30.3 bits (65), Expect = 7.3
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 533 QIFTSQMYKRPTRASTLSGRQLTPPLVGVVCSRRRTSA-TKLAQSTPSASP 384
++F S + P A+ L Q PP G+ S RT A T L S PS SP
Sbjct: 95 ELFASVLPMAPEEAARLQQPQPLPPPSGIHLSASRTLALTLLYSSPPSHSP 145
>AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform c protein.
Length = 2243
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 256 QDASAVGDEKEIQDNKDDEDVANLDFEEISDGELEEEKTRAGLGDALGVDW 408
QD+ G ++ Q+N+DDE E DGE EEE + + D L +W
Sbjct: 1895 QDSQKAGGAEDEQENEDDE--------EERDGEEEEEAEESNVEDLLENNW 1937
>AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform b protein.
Length = 2286
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 256 QDASAVGDEKEIQDNKDDEDVANLDFEEISDGELEEEKTRAGLGDALGVDW 408
QD+ G ++ Q+N+DDE E DGE EEE + + D L +W
Sbjct: 1938 QDSQKAGGAEDEQENEDDE--------EERDGEEEEEAEESNVEDLLENNW 1980
>AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform a protein.
Length = 2297
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 256 QDASAVGDEKEIQDNKDDEDVANLDFEEISDGELEEEKTRAGLGDALGVDW 408
QD+ G ++ Q+N+DDE E DGE EEE + + D L +W
Sbjct: 1949 QDSQKAGGAEDEQENEDDE--------EERDGEEEEEAEESNVEDLLENNW 1991
>AF112218-1|AAF17206.1| 742|Homo sapiens unknown protein.
Length = 742
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 546 LKNNKELLQAEKTAQDQKCEKSENLVQENGCHDIQTRKLEDISD 677
L+ ELLQ + T CEK E L QEN + + RKL+ D
Sbjct: 562 LEKENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLD 605
>AF062922-1|AAC77912.1| 1099|Homo sapiens retinal rod Na-Ca+K
exchanger protein.
Length = 1099
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +1
Query: 274 GDEKEIQDNKDDEDVANLDFEEISDGELEEEKTRAGLGDALGVDW 408
GD +E ++ +++++ + E+ + E EEE+ G + L +DW
Sbjct: 857 GDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDW 901
>AF062921-1|AAC16732.1| 1099|Homo sapiens retinal rod Na-Ca+K
exchanger splice variant protein.
Length = 1099
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +1
Query: 274 GDEKEIQDNKDDEDVANLDFEEISDGELEEEKTRAGLGDALGVDW 408
GD +E ++ +++++ + E+ + E EEE+ G + L +DW
Sbjct: 857 GDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDW 901
>AF026132-1|AAB97832.1| 1081|Homo sapiens retinal rod Na+/Ca+, K+
exchanger protein.
Length = 1081
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +1
Query: 274 GDEKEIQDNKDDEDVANLDFEEISDGELEEEKTRAGLGDALGVDW 408
GD +E ++ +++++ + E+ + E EEE+ G + L +DW
Sbjct: 839 GDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDW 883
>AB202103-3|BAE78626.1| 152|Homo sapiens chromosome 6 open reading
frame 16 protein.
Length = 152
Score = 30.3 bits (65), Expect = 7.3
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 533 QIFTSQMYKRPTRASTLSGRQLTPPLVGVVCSRRRTSA-TKLAQSTPSASP 384
++F S + P A+ L Q PP G+ S RT A T L S PS SP
Sbjct: 95 ELFASVLPMAPEEAARLQQPQPLPPPSGIHLSASRTLAPTLLYSSPPSHSP 145
>AB201172-1|BAE44387.1| 1870|Homo sapiens girdin protein.
Length = 1870
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 546 LKNNKELLQAEKTAQDQKCEKSENLVQENGCHDIQTRKLEDISD 677
L+ ELLQ + T CEK E L QEN + + RKL+ D
Sbjct: 637 LEKENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLD 680
>AB125644-1|BAF44475.1| 1843|Homo sapiens PKB/Akt-binding protein
protein.
Length = 1843
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 546 LKNNKELLQAEKTAQDQKCEKSENLVQENGCHDIQTRKLEDISD 677
L+ ELLQ + T CEK E L QEN + + RKL+ D
Sbjct: 637 LEKENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLD 680
>AB088114-4|BAC54950.1| 104|Homo sapiens hypothetical protein
protein.
Length = 104
Score = 30.3 bits (65), Expect = 7.3
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 533 QIFTSQMYKRPTRASTLSGRQLTPPLVGVVCSRRRTSA-TKLAQSTPSASP 384
++F S + P A+ L Q PP G+ S RT A T L S PS SP
Sbjct: 47 ELFASVLPMAPEEAARLQQPQPLPPPSGIHLSASRTLAPTLLYSSPPSHSP 97
>AB031479-1|BAA88130.1| 152|Homo sapiens SEEK1 protein.
Length = 152
Score = 30.3 bits (65), Expect = 7.3
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 533 QIFTSQMYKRPTRASTLSGRQLTPPLVGVVCSRRRTSA-TKLAQSTPSASP 384
++F S + P A+ L Q PP G+ S RT A T L S PS SP
Sbjct: 95 ELFASVLPMAPEEAARLQQPQPLPPPSGIHLSASRTLAPTLLYSSPPSHSP 145
>AB014602-1|BAA31677.2| 988|Homo sapiens KIAA0702 protein protein.
Length = 988
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +1
Query: 274 GDEKEIQDNKDDEDVANLDFEEISDGELEEEKTRAGLGDALGVDW 408
GD +E ++ +++++ + E+ + E EEE+ G + L +DW
Sbjct: 842 GDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDW 886
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,920,518
Number of Sequences: 237096
Number of extensions: 1427719
Number of successful extensions: 6009
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 5272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5913
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -