Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40727
         (720 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    24   1.7  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    23   3.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   3.8  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   6.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.7  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    21   8.9  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   8.9  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +2

Query: 221 VRSQRSRN*IKVVAEWKFRELDRDKSDSLQKSEYRG 328
           + S+   N +KV+ EWK+ + D    +  Q +   G
Sbjct: 20  IHSRNLTNSLKVIYEWKYIDYDFGSDEKRQAAIQSG 55


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 391 LRREWRRRDSPGRVDSLFTSKPGAPYTGLR 480
           LRRE      PG    ++ S+P  P+  LR
Sbjct: 87  LRREAELEAEPGNNRPVYISQPRPPHPRLR 116



 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 391 LRREWRRRDSPGRVDSLFTSKPGAPYTGLR 480
           LRRE      PG    ++ S+P  P+  LR
Sbjct: 143 LRREAELEAEPGNNRPVYISQPRPPHPRLR 172



 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 391 LRREWRRRDSPGRVDSLFTSKPGAPYTGLR 480
           LRRE +    PG    ++  +P  P+  LR
Sbjct: 31  LRREAKPEAEPGNNRPVYIPQPRPPHPRLR 60


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 608 KPTTALQTVKLFWTNRKQVGAALYVPECTGDG 703
           KPT +  +  L   ++++ G  L V E + DG
Sbjct: 745 KPTISPDSRHLVTLDKQETGVTLVVQEISSDG 776


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 391 LRREWRRRDSPGRVDSLFTSKPGAPYTGLR 480
           LRRE +    PG    ++  +P  P+  LR
Sbjct: 32  LRREAKPEAEPGNNRPIYIPQPRPPHPRLR 61



 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 391 LRREWRRRDSPGRVDSLFTSKPGAPYTGLR 480
           LRRE   +  PG    ++  +P  P+  LR
Sbjct: 60  LRREAEPKAEPGNNRPIYIPQPRPPHPRLR 89


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/30 (30%), Positives = 12/30 (40%)
 Frame = +2

Query: 455  PEPPTPDYEDSGPEVEPDTKRSRHRTRVQC 544
            P PP P   D       D+K S   +  +C
Sbjct: 1859 PPPPPPRNHDQNNSSFNDSKESNEISEAEC 1888


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 391 LRREWRRRDSPGRVDSLFTSKPGAPYTGLR 480
           LRRE +    PG    ++  +P  P+  LR
Sbjct: 3   LRREAKPEAEPGNNRPVYIPQPRPPHPRLR 32



 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 391 LRREWRRRDSPGRVDSLFTSKPGAPYTGLR 480
           LRRE +    PG    ++  +P  P+  LR
Sbjct: 143 LRREAKPEAEPGNNRPVYIPQPRPPHPRLR 172


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 340 YQEGSQTEAMRQSLGSWLRREWRR 411
           ++E  +TEA    L  +L +EW++
Sbjct: 73  HEELRRTEAFEVDLEFYLGKEWKK 96


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,371
Number of Sequences: 438
Number of extensions: 4276
Number of successful extensions: 26
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)