Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40720
(783 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020490-1|AAH20490.1| 223|Homo sapiens twisted gastrulation ho... 54 4e-07
AK075550-1|BAC11693.1| 223|Homo sapiens protein ( Homo sapiens ... 54 4e-07
AK027629-1|BAB55246.1| 148|Homo sapiens protein ( Homo sapiens ... 54 4e-07
AJ297391-1|CAC05581.1| 223|Homo sapiens twisted gastrulation pr... 54 4e-07
AF294628-1|AAG10076.1| 223|Homo sapiens twisted gastrulation pr... 54 4e-07
AF196834-1|AAG43468.1| 223|Homo sapiens twisted gastrulation-li... 54 4e-07
Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein. 34 0.66
AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein p... 34 0.66
AJ400853-1|CAC14138.1| 1201|Homo sapiens MUC4 protein splice var... 31 3.5
>BC020490-1|AAH20490.1| 223|Homo sapiens twisted gastrulation
homolog 1 (Drosophila) protein.
Length = 223
Score = 54.4 bits (125), Expect = 4e-07
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +3
Query: 516 DAQQRWLSMTYPVDIDLSAYRPVP---EKQVVYHLQSVEQDSEPVNTDMVTFN---CTVA 677
D Q W +++PV +LS + + E H Q+V S V+ + CTV
Sbjct: 111 DTQLNWNIVSFPVAEELSHHENLVSFLETVNQPHHQNVSVPSNNVHAPYSSDKEHMCTVV 170
Query: 678 YMSQCMSCDKCRASCRSMGANSIRWFHD 761
Y CMS +C+ SC SMGA+ RWFH+
Sbjct: 171 YFDDCMSIHQCKISCESMGASKYRWFHN 198
Score = 40.3 bits (90), Expect = 0.008
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +1
Query: 253 KAYACNEAICASVVSKCMLTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VDMCPKPN 426
++ +CN+A+CAS VSKC++ + V MC N
Sbjct: 22 ESLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCDCVGMCNPRN 81
Query: 427 DTQTELSKTSYVEELGDGVPGLFAALT 507
+ T + S VEEL + +P LF ALT
Sbjct: 82 YSDTPPTSKSTVEELHEPIPSLFRALT 108
>AK075550-1|BAC11693.1| 223|Homo sapiens protein ( Homo sapiens
cDNA PSEC0250 fis, clone NT2RP3001874, highly similar to
Twisted gastrulation. ).
Length = 223
Score = 54.4 bits (125), Expect = 4e-07
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +3
Query: 516 DAQQRWLSMTYPVDIDLSAYRPVP---EKQVVYHLQSVEQDSEPVNTDMVTFN---CTVA 677
D Q W +++PV +LS + + E H Q+V S V+ + CTV
Sbjct: 111 DTQLNWNIVSFPVAEELSHHENLVSFLETVNQPHHQNVSVPSNNVHAPYSSDKEHMCTVV 170
Query: 678 YMSQCMSCDKCRASCRSMGANSIRWFHD 761
Y CMS +C+ SC SMGA+ RWFH+
Sbjct: 171 YFDDCMSIHQCKISCESMGASKYRWFHN 198
Score = 37.9 bits (84), Expect = 0.041
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = +1
Query: 253 KAYACNEAICASVVSKCMLTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VDMCPKPN 426
++ +CN+A+CAS SKC++ + V MC N
Sbjct: 22 ESLSCNKALCASDESKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCDCVGMCNPRN 81
Query: 427 DTQTELSKTSYVEELGDGVPGLFAALT 507
+ T + S VEEL + +P LF ALT
Sbjct: 82 YSDTPPTSKSTVEELHEPIPSLFRALT 108
>AK027629-1|BAB55246.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ14723 fis, clone NT2RP3001708, weakly similar to
TWISTED GASTRULATION PROTEIN PRECURSOR. ).
Length = 148
Score = 54.4 bits (125), Expect = 4e-07
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +3
Query: 516 DAQQRWLSMTYPVDIDLSAYRPVP---EKQVVYHLQSVEQDSEPVNTDMVTFN---CTVA 677
D Q W +++PV +LS + + E H Q+V S V+ + CTV
Sbjct: 36 DTQLNWNIVSFPVAEELSHHENLVSFLETVNQPHHQNVSVPSNNVHAPYSSDKEHMCTVV 95
Query: 678 YMSQCMSCDKCRASCRSMGANSIRWFHD 761
Y CMS +C+ SC SMGA+ RWFH+
Sbjct: 96 YFDDCMSIHQCKISCESMGASKYRWFHN 123
>AJ297391-1|CAC05581.1| 223|Homo sapiens twisted gastrulation
protein protein.
Length = 223
Score = 54.4 bits (125), Expect = 4e-07
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +3
Query: 516 DAQQRWLSMTYPVDIDLSAYRPVP---EKQVVYHLQSVEQDSEPVNTDMVTFN---CTVA 677
D Q W +++PV +LS + + E H Q+V S V+ + CTV
Sbjct: 111 DTQLNWNIVSFPVAEELSHHENLVSFLETVNQPHHQNVSVPSNNVHAPYSSDKEHMCTVV 170
Query: 678 YMSQCMSCDKCRASCRSMGANSIRWFHD 761
Y CMS +C+ SC SMGA+ RWFH+
Sbjct: 171 YFDDCMSIHQCKISCESMGASKYRWFHN 198
Score = 40.3 bits (90), Expect = 0.008
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +1
Query: 253 KAYACNEAICASVVSKCMLTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VDMCPKPN 426
++ +CN+A+CAS VSKC++ + V MC N
Sbjct: 22 ESLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCDCVGMCNPRN 81
Query: 427 DTQTELSKTSYVEELGDGVPGLFAALT 507
+ T + S VEEL + +P LF ALT
Sbjct: 82 YSDTPPTSKSTVEELHEPIPSLFRALT 108
>AF294628-1|AAG10076.1| 223|Homo sapiens twisted gastrulation
protein precursor protein.
Length = 223
Score = 54.4 bits (125), Expect = 4e-07
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +3
Query: 516 DAQQRWLSMTYPVDIDLSAYRPVP---EKQVVYHLQSVEQDSEPVNTDMVTFN---CTVA 677
D Q W +++PV +LS + + E H Q+V S V+ + CTV
Sbjct: 111 DTQLNWNIVSFPVAEELSHHENLVSFLETVNQPHHQNVSVPSNNVHAPYSSDKEHMCTVV 170
Query: 678 YMSQCMSCDKCRASCRSMGANSIRWFHD 761
Y CMS +C+ SC SMGA+ RWFH+
Sbjct: 171 YFDDCMSIHQCKISCESMGASKYRWFHN 198
Score = 40.3 bits (90), Expect = 0.008
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +1
Query: 253 KAYACNEAICASVVSKCMLTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VDMCPKPN 426
++ +CN+A+CAS VSKC++ + V MC N
Sbjct: 22 ESLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCDCVGMCNPRN 81
Query: 427 DTQTELSKTSYVEELGDGVPGLFAALT 507
+ T + S VEEL + +P LF ALT
Sbjct: 82 YSDTPPTSKSTVEELHEPIPSLFRALT 108
>AF196834-1|AAG43468.1| 223|Homo sapiens twisted gastrulation-like
protein precursor protein.
Length = 223
Score = 54.4 bits (125), Expect = 4e-07
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +3
Query: 516 DAQQRWLSMTYPVDIDLSAYRPVP---EKQVVYHLQSVEQDSEPVNTDMVTFN---CTVA 677
D Q W +++PV +LS + + E H Q+V S V+ + CTV
Sbjct: 111 DTQLNWNIVSFPVAEELSHHENLVSFLETVNQPHHQNVSVPSNNVHAPYSSDKEHMCTVV 170
Query: 678 YMSQCMSCDKCRASCRSMGANSIRWFHD 761
Y CMS +C+ SC SMGA+ RWFH+
Sbjct: 171 YFDDCMSIHQCKISCESMGASKYRWFHN 198
Score = 40.3 bits (90), Expect = 0.008
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +1
Query: 253 KAYACNEAICASVVSKCMLTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VDMCPKPN 426
++ +CN+A+CAS VSKC++ + V MC N
Sbjct: 22 ESLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCDCVGMCNPRN 81
Query: 427 DTQTELSKTSYVEELGDGVPGLFAALT 507
+ T + S VEEL + +P LF ALT
Sbjct: 82 YSDTPPTSKSTVEELHEPIPSLFRALT 108
>Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein.
Length = 2663
Score = 33.9 bits (74), Expect = 0.66
Identities = 16/30 (53%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -2
Query: 377 ELRQLKQSLQHEQS-FKSHLHDWVNMHFDT 291
+L+QL++SLQ E+ KS +HD VNM+ DT
Sbjct: 933 DLKQLQESLQIERDQLKSDIHDTVNMNIDT 962
>AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein
protein.
Length = 2585
Score = 33.9 bits (74), Expect = 0.66
Identities = 16/30 (53%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -2
Query: 377 ELRQLKQSLQHEQS-FKSHLHDWVNMHFDT 291
+L+QL++SLQ E+ KS +HD VNM+ DT
Sbjct: 913 DLKQLQESLQIERDQLKSDIHDTVNMNIDT 942
>AJ400853-1|CAC14138.1| 1201|Homo sapiens MUC4 protein splice variant
sv16 protein.
Length = 1201
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 477 WSTRPLCCSNNDPDAQQRWLSMTYPVDIDLS 569
+STR + CS P AQ RWL P D+ S
Sbjct: 1165 FSTRAVGCSGTWPSAQWRWLFRKQPTDVPAS 1195
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,510,020
Number of Sequences: 237096
Number of extensions: 2095271
Number of successful extensions: 6245
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6245
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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