Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40719
(761 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 29 0.062
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 24 1.3
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 24 1.3
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 24 1.3
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 24 1.3
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 24 1.3
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 24 1.3
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 24 1.3
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 24 1.3
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 24 1.3
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 24 1.3
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 2.3
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 28.7 bits (61), Expect = 0.062
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 582 DEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGE--ELRSHSHVHAQRCHQPR 746
+E+ +E+ R++ R +R + +R YR++GE + RS +R +P+
Sbjct: 257 NEKEKLLEERTSRERYSRSREREQKSYKNEREYRKYGETSKERSRDRTERERSKEPK 313
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = +3
Query: 582 DEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRSHSHVHAQR 731
+E+ +E+ + R +R + +R YR++GE + S +R
Sbjct: 24 NEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTER 73
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = +3
Query: 582 DEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRSHSHVHAQR 731
+E+ +E+ + R +R + +R YR++GE + S +R
Sbjct: 24 NEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTER 73
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = +3
Query: 582 DEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRSHSHVHAQR 731
+E+ +E+ + R +R + +R YR++GE + S +R
Sbjct: 24 NEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTER 73
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = +3
Query: 582 DEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRSHSHVHAQR 731
+E+ +E+ + R +R + +R YR++GE + S +R
Sbjct: 24 NEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTER 73
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = +3
Query: 582 DEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRSHSHVHAQR 731
+E+ +E+ + R +R + +R YR++GE + S +R
Sbjct: 257 NEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTER 306
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = +3
Query: 582 DEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRSHSHVHAQR 731
+E+ +E+ + R +R + +R YR++GE + S +R
Sbjct: 257 NEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTER 306
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = +3
Query: 582 DEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRSHSHVHAQR 731
+E+ +E+ + R +R + +R YR++GE + S +R
Sbjct: 257 NEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTER 306
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = +3
Query: 582 DEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRSHSHVHAQR 731
+E+ +E+ + R +R + +R YR++GE + S +R
Sbjct: 257 NEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTER 306
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = +3
Query: 582 DEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRSHSHVHAQR 731
+E+ +E+ + R +R + +R YR++GE + S +R
Sbjct: 257 NEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTER 306
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = +3
Query: 582 DEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRSHSHVHAQR 731
+E+ +E+ + R +R + +R YR++GE + S +R
Sbjct: 246 NEKEKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTER 295
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 418 QLVFDHSPYNNRGCDFQKENGKAH 489
+L PY DF KE+GK H
Sbjct: 1017 RLSSSEKPYMFETVDFSKEDGKEH 1040
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,422
Number of Sequences: 438
Number of extensions: 5295
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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