Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40690
         (711 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.2  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    22   6.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   6.6  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   8.7  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = -2

Query: 551 RVRFGRSESCVHP-PRWRHLPGCDYRQ 474
           R+ F  S    +  P W+ LP C Y+Q
Sbjct: 244 RIHFTASRDAFYGLPLWKLLPTCAYKQ 270


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 234 RPWLQHQSDKDKFQVNLDVQHFAPEEISVKTAD 332
           RP+ Q Q  + + Q   + +   P+EI V+  +
Sbjct: 161 RPYQQQQQQQQRQQQRQEERRLRPDEIKVEVGE 193


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 429 SPPAKRSDE*IDAICN 382
           +PP   ++E +DA+CN
Sbjct: 453 APPQLPTEESVDALCN 468


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = -2

Query: 623 NTCADTADDLSLVAVGIGPSPPCARVRFGRSESCVHPPRW 504
           N  A+ + D + VA       P A VR+        PPRW
Sbjct: 678 NLAAEHSGDYTCVAAN-----PAAEVRYTAKLQVKVPPRW 712


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 76  NQRHFVVVDL*RCSLSFEDFSHLFQ 2
           N+   V++D  RCS+ +    H F+
Sbjct: 199 NKNGSVILDTARCSMKWTLIEHAFE 223


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,437
Number of Sequences: 438
Number of extensions: 4240
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)