Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40677
         (651 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ640137-1|CAG26691.1| 2697|Homo sapiens delangin protein.             77   5e-14
AJ627032-1|CAF25290.1| 2804|Homo sapiens delangin protein.             77   5e-14
AB019602-1|BAA77349.1| 2158|Homo sapiens IDN3-B protein.               77   5e-14
AB019494-1|BAA77335.1| 2265|Homo sapiens IDN3 protein.                 77   5e-14
BC033847-1|AAH33847.1|  175|Homo sapiens NIPBL protein protein.        50   7e-06

>AJ640137-1|CAG26691.1| 2697|Homo sapiens delangin protein.
          Length = 2697

 Score = 77.0 bits (181), Expect = 5e-14
 Identities = 37/79 (46%), Positives = 53/79 (67%)
 Frame = +1

Query: 16   NSREKNVIRGFRKKELDDLPTALNGFLYSLLRNTRPQRRALILSLLKQFDDVSTAPLDQM 195
            N+  K+ +RGFR+   D+  +AL   LYS++R  R  RRA ++SLL  FDD +   +  +
Sbjct: 2372 NTCLKDPVRGFRQ---DESSSALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKTDVTML 2428

Query: 196  LYLADNLSYFPYQVQDEPL 252
            LY+ADNL+ FPYQ Q+EPL
Sbjct: 2429 LYIADNLACFPYQTQEEPL 2447



 Score = 50.0 bits (114), Expect = 7e-06
 Identities = 22/42 (52%), Positives = 31/42 (73%)
 Frame = +2

Query: 509  FTDAKINQYSPSESVKVYEKAVSRRHAPIFEPKATILQLQED 634
            F+D+KI +YSPSES KVY+KA++R+    F PK T+  L+ D
Sbjct: 2559 FSDSKIQKYSPSESAKVYDKAINRKTGVHFHPKQTLDFLRSD 2600


>AJ627032-1|CAF25290.1| 2804|Homo sapiens delangin protein.
          Length = 2804

 Score = 77.0 bits (181), Expect = 5e-14
 Identities = 37/79 (46%), Positives = 53/79 (67%)
 Frame = +1

Query: 16   NSREKNVIRGFRKKELDDLPTALNGFLYSLLRNTRPQRRALILSLLKQFDDVSTAPLDQM 195
            N+  K+ +RGFR+   D+  +AL   LYS++R  R  RRA ++SLL  FDD +   +  +
Sbjct: 2372 NTCLKDPVRGFRQ---DESSSALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKTDVTML 2428

Query: 196  LYLADNLSYFPYQVQDEPL 252
            LY+ADNL+ FPYQ Q+EPL
Sbjct: 2429 LYIADNLACFPYQTQEEPL 2447



 Score = 50.0 bits (114), Expect = 7e-06
 Identities = 22/42 (52%), Positives = 31/42 (73%)
 Frame = +2

Query: 509  FTDAKINQYSPSESVKVYEKAVSRRHAPIFEPKATILQLQED 634
            F+D+KI +YSPSES KVY+KA++R+    F PK T+  L+ D
Sbjct: 2559 FSDSKIQKYSPSESAKVYDKAINRKTGVHFHPKQTLDFLRSD 2600


>AB019602-1|BAA77349.1| 2158|Homo sapiens IDN3-B protein.
          Length = 2158

 Score = 77.0 bits (181), Expect = 5e-14
 Identities = 37/79 (46%), Positives = 53/79 (67%)
 Frame = +1

Query: 16   NSREKNVIRGFRKKELDDLPTALNGFLYSLLRNTRPQRRALILSLLKQFDDVSTAPLDQM 195
            N+  K+ +RGFR+   D+  +AL   LYS++R  R  RRA ++SLL  FDD +   +  +
Sbjct: 1833 NTCLKDPVRGFRQ---DESSSALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKTDVTML 1889

Query: 196  LYLADNLSYFPYQVQDEPL 252
            LY+ADNL+ FPYQ Q+EPL
Sbjct: 1890 LYIADNLACFPYQTQEEPL 1908



 Score = 50.0 bits (114), Expect = 7e-06
 Identities = 22/42 (52%), Positives = 31/42 (73%)
 Frame = +2

Query: 509  FTDAKINQYSPSESVKVYEKAVSRRHAPIFEPKATILQLQED 634
            F+D+KI +YSPSES KVY+KA++R+    F PK T+  L+ D
Sbjct: 2020 FSDSKIQKYSPSESAKVYDKAINRKTGVHFHPKQTLDFLRSD 2061


>AB019494-1|BAA77335.1| 2265|Homo sapiens IDN3 protein.
          Length = 2265

 Score = 77.0 bits (181), Expect = 5e-14
 Identities = 37/79 (46%), Positives = 53/79 (67%)
 Frame = +1

Query: 16   NSREKNVIRGFRKKELDDLPTALNGFLYSLLRNTRPQRRALILSLLKQFDDVSTAPLDQM 195
            N+  K+ +RGFR+   D+  +AL   LYS++R  R  RRA ++SLL  FDD +   +  +
Sbjct: 1833 NTCLKDPVRGFRQ---DESSSALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKTDVTML 1889

Query: 196  LYLADNLSYFPYQVQDEPL 252
            LY+ADNL+ FPYQ Q+EPL
Sbjct: 1890 LYIADNLACFPYQTQEEPL 1908



 Score = 50.0 bits (114), Expect = 7e-06
 Identities = 22/42 (52%), Positives = 31/42 (73%)
 Frame = +2

Query: 509  FTDAKINQYSPSESVKVYEKAVSRRHAPIFEPKATILQLQED 634
            F+D+KI +YSPSES KVY+KA++R+    F PK T+  L+ D
Sbjct: 2020 FSDSKIQKYSPSESAKVYDKAINRKTGVHFHPKQTLDFLRSD 2061


>BC033847-1|AAH33847.1|  175|Homo sapiens NIPBL protein protein.
          Length = 175

 Score = 50.0 bits (114), Expect = 7e-06
 Identities = 22/42 (52%), Positives = 31/42 (73%)
 Frame = +2

Query: 509 FTDAKINQYSPSESVKVYEKAVSRRHAPIFEPKATILQLQED 634
           F+D+KI +YSPSES KVY+KA++R+    F PK T+  L+ D
Sbjct: 37  FSDSKIQKYSPSESAKVYDKAINRKTGVHFHPKQTLDFLRSD 78


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,038,824
Number of Sequences: 237096
Number of extensions: 1117700
Number of successful extensions: 2313
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2313
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)