Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40675
(696 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 75 3e-13
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 75 3e-13
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 75 3e-13
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 75 3e-13
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 75 3e-13
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 75 3e-13
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 75 3e-13
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 75 3e-13
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 75 3e-13
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 75 3e-13
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 75 3e-13
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 75 3e-13
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 75 3e-13
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 72 2e-12
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 74.5 bits (175), Expect = 3e-13
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = +3
Query: 3 IIFNKDQGLTRAFRNIPRCGAPEC*QADLLKLAPGGHLGRFVIWTQSAFGRLDPLFGS*R 182
II+N+D G+ +AFRNIP + ++LKLAPGGH+GRF IWT+SAF +LD L+G+ R
Sbjct: 208 IIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 267
Score = 59.7 bits (138), Expect = 1e-08
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 KSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-L 432
KS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 293 KSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDK 352
Query: 433 ADAEKSGLKLSKRNPAMKAEK 495
A A + L+ A A K
Sbjct: 353 AAAAAAALQAKSDEKAAVAGK 373
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +2
Query: 197 KKNFNLPQPKMANTDLTRL---PSLMRSGRS 280
K N+NLP KM NTDL+R+ P + R+ R+
Sbjct: 273 KSNYNLPMHKMINTDLSRILKSPEIQRALRA 303
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 74.5 bits (175), Expect = 3e-13
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = +3
Query: 3 IIFNKDQGLTRAFRNIPRCGAPEC*QADLLKLAPGGHLGRFVIWTQSAFGRLDPLFGS*R 182
II+N+D G+ +AFRNIP + ++LKLAPGGH+GRF IWT+SAF +LD L+G+ R
Sbjct: 209 IIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 59.7 bits (138), Expect = 1e-08
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 KSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-L 432
KS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 294 KSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDK 353
Query: 433 ADAEKSGLKLSKRNPAMKAEK 495
A A + L+ A A K
Sbjct: 354 AAAAAAALQAKSDEKAAVAGK 374
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +2
Query: 197 KKNFNLPQPKMANTDLTRL---PSLMRSGRS 280
K N+NLP KM NTDL+R+ P + R+ R+
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRA 304
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 74.5 bits (175), Expect = 3e-13
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = +3
Query: 3 IIFNKDQGLTRAFRNIPRCGAPEC*QADLLKLAPGGHLGRFVIWTQSAFGRLDPLFGS*R 182
II+N+D G+ +AFRNIP + ++LKLAPGGH+GRF IWT+SAF +LD L+G+ R
Sbjct: 209 IIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 59.7 bits (138), Expect = 1e-08
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 KSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-L 432
KS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 294 KSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDK 353
Query: 433 ADAEKSGLKLSKRNPAMKAEK 495
A A + L+ A A K
Sbjct: 354 AAAAAAALQAKSDEKAAVAGK 374
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +2
Query: 197 KKNFNLPQPKMANTDLTRL---PSLMRSGRS 280
K N+NLP KM NTDL+R+ P + R+ R+
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRA 304
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 74.5 bits (175), Expect = 3e-13
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = +3
Query: 3 IIFNKDQGLTRAFRNIPRCGAPEC*QADLLKLAPGGHLGRFVIWTQSAFGRLDPLFGS*R 182
II+N+D G+ +AFRNIP + ++LKLAPGGH+GRF IWT+SAF +LD L+G+ R
Sbjct: 209 IIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 59.7 bits (138), Expect = 1e-08
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 KSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-L 432
KS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 294 KSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDK 353
Query: 433 ADAEKSGLKLSKRNPAMKAEK 495
A A + L+ A A K
Sbjct: 354 AAAAAAALQAKSDEKAAVAGK 374
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +2
Query: 197 KKNFNLPQPKMANTDLTRL---PSLMRSGRS 280
K N+NLP KM NTDL+R+ P + R+ R+
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRA 304
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 74.5 bits (175), Expect = 3e-13
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = +3
Query: 3 IIFNKDQGLTRAFRNIPRCGAPEC*QADLLKLAPGGHLGRFVIWTQSAFGRLDPLFGS*R 182
II+N+D G+ +AFRNIP + ++LKLAPGGH+GRF IWT+SAF +LD L+G+ R
Sbjct: 209 IIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 59.7 bits (138), Expect = 1e-08
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 KSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-L 432
KS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 294 KSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDK 353
Query: 433 ADAEKSGLKLSKRNPAMKAEK 495
A A + L+ A A K
Sbjct: 354 AAAAAAALQAKSDEKAAVAGK 374
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +2
Query: 197 KKNFNLPQPKMANTDLTRL---PSLMRSGRS 280
K N+NLP KM NTDL+R+ P + R+ R+
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRA 304
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 74.5 bits (175), Expect = 3e-13
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = +3
Query: 3 IIFNKDQGLTRAFRNIPRCGAPEC*QADLLKLAPGGHLGRFVIWTQSAFGRLDPLFGS*R 182
II+N+D G+ +AFRNIP + ++LKLAPGGH+GRF IWT+SAF +LD L+G+ R
Sbjct: 209 IIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 59.7 bits (138), Expect = 1e-08
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 KSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-L 432
KS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 294 KSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDK 353
Query: 433 ADAEKSGLKLSKRNPAMKAEK 495
A A + L+ A A K
Sbjct: 354 AAAAAAALQAKSDEKAAVAGK 374
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +2
Query: 197 KKNFNLPQPKMANTDLTRL---PSLMRSGRS 280
K N+NLP KM NTDL+R+ P + R+ R+
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRA 304
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 74.5 bits (175), Expect = 3e-13
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = +3
Query: 3 IIFNKDQGLTRAFRNIPRCGAPEC*QADLLKLAPGGHLGRFVIWTQSAFGRLDPLFGS*R 182
II+N+D G+ +AFRNIP + ++LKLAPGGH+GRF IWT+SAF +LD L+G+ R
Sbjct: 209 IIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 59.7 bits (138), Expect = 1e-08
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 KSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-L 432
KS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 294 KSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDK 353
Query: 433 ADAEKSGLKLSKRNPAMKAEK 495
A A + L+ A A K
Sbjct: 354 AAAAAAALQAKSDEKAAVAGK 374
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +2
Query: 197 KKNFNLPQPKMANTDLTRL---PSLMRSGRS 280
K N+NLP KM NTDL+R+ P + R+ R+
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRA 304
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 74.5 bits (175), Expect = 3e-13
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = +3
Query: 3 IIFNKDQGLTRAFRNIPRCGAPEC*QADLLKLAPGGHLGRFVIWTQSAFGRLDPLFGS*R 182
II+N+D G+ +AFRNIP + ++LKLAPGGH+GRF IWT+SAF +LD L+G+ R
Sbjct: 209 IIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 59.7 bits (138), Expect = 1e-08
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 KSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-L 432
KS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 294 KSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDK 353
Query: 433 ADAEKSGLKLSKRNPAMKAEK 495
A A + L+ A A K
Sbjct: 354 AAAAAAALQAKSDEKAAVAGK 374
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +2
Query: 197 KKNFNLPQPKMANTDLTRL---PSLMRSGRS 280
K N+NLP KM NTDL+R+ P + R+ R+
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRA 304
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 74.5 bits (175), Expect = 3e-13
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = +3
Query: 3 IIFNKDQGLTRAFRNIPRCGAPEC*QADLLKLAPGGHLGRFVIWTQSAFGRLDPLFGS*R 182
II+N+D G+ +AFRNIP + ++LKLAPGGH+GRF IWT+SAF +LD L+G+ R
Sbjct: 209 IIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 59.7 bits (138), Expect = 1e-08
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 KSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-L 432
KS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 294 KSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDK 353
Query: 433 ADAEKSGLKLSKRNPAMKAEK 495
A A + L+ A A K
Sbjct: 354 AAAAAAALQAKSDEKAAVAGK 374
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +2
Query: 197 KKNFNLPQPKMANTDLTRL---PSLMRSGRS 280
K N+NLP KM NTDL+R+ P + R+ R+
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRA 304
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 74.5 bits (175), Expect = 3e-13
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = +3
Query: 3 IIFNKDQGLTRAFRNIPRCGAPEC*QADLLKLAPGGHLGRFVIWTQSAFGRLDPLFGS*R 182
II+N+D G+ +AFRNIP + ++LKLAPGGH+GRF IWT+SAF +LD L+G+ R
Sbjct: 209 IIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 59.7 bits (138), Expect = 1e-08
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 KSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-L 432
KS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 294 KSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDK 353
Query: 433 ADAEKSGLKLSKRNPAMKAEK 495
A A + L+ A A K
Sbjct: 354 AAAAAAALQAKSDEKAAVAGK 374
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +2
Query: 197 KKNFNLPQPKMANTDLTRL---PSLMRSGRS 280
K N+NLP KM NTDL+R+ P + R+ R+
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRA 304
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 74.5 bits (175), Expect = 3e-13
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = +3
Query: 3 IIFNKDQGLTRAFRNIPRCGAPEC*QADLLKLAPGGHLGRFVIWTQSAFGRLDPLFGS*R 182
II+N+D G+ +AFRNIP + ++LKLAPGGH+GRF IWT+SAF +LD L+G+ R
Sbjct: 209 IIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 59.7 bits (138), Expect = 1e-08
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 KSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-L 432
KS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 294 KSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDK 353
Query: 433 ADAEKSGLKLSKRNPAMKAEK 495
A A + L+ A A K
Sbjct: 354 AAAAAAALQAKSDEKAAVAGK 374
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +2
Query: 197 KKNFNLPQPKMANTDLTRL---PSLMRSGRS 280
K N+NLP KM NTDL+R+ P + R+ R+
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRA 304
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 74.5 bits (175), Expect = 3e-13
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = +3
Query: 3 IIFNKDQGLTRAFRNIPRCGAPEC*QADLLKLAPGGHLGRFVIWTQSAFGRLDPLFGS*R 182
II+N+D G+ +AFRNIP + ++LKLAPGGH+GRF IWT+SAF +LD L+G+ R
Sbjct: 223 IIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 282
Score = 58.0 bits (134), Expect = 3e-08
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 KSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-L 432
KS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 308 KSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILCQARNHKLRVDK 367
Query: 433 ADAEKSGLKLSKRNPAMKAEK 495
A A + L+ A A K
Sbjct: 368 AAAAAAALQAKSDEKAAVAGK 388
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +2
Query: 197 KKNFNLPQPKMANTDLTRL---PSLMRSGRS 280
K N+NLP KM NTDL+R+ P + R+ R+
Sbjct: 288 KSNYNLPMHKMINTDLSRILKSPEIQRALRA 318
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 74.5 bits (175), Expect = 3e-13
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = +3
Query: 3 IIFNKDQGLTRAFRNIPRCGAPEC*QADLLKLAPGGHLGRFVIWTQSAFGRLDPLFGS*R 182
II+N+D G+ +AFRNIP + ++LKLAPGGH+GRF IWT+SAF +LD L+G+ R
Sbjct: 209 IIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWR 268
Score = 59.7 bits (138), Expect = 1e-08
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 KSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-L 432
KS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 294 KSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDK 353
Query: 433 ADAEKSGLKLSKRNPAMKAEK 495
A A + L+ A A K
Sbjct: 354 AAAAAAALQAKSDEKAAVAGK 374
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +2
Query: 197 KKNFNLPQPKMANTDLTRL---PSLMRSGRS 280
K N+NLP KM NTDL+R+ P + R+ R+
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRA 304
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 72.1 bits (169), Expect = 2e-12
Identities = 32/60 (53%), Positives = 44/60 (73%)
Frame = +3
Query: 3 IIFNKDQGLTRAFRNIPRCGAPEC*QADLLKLAPGGHLGRFVIWTQSAFGRLDPLFGS*R 182
II+N+D G+ +AFRNIP + ++LKLAPGGH+GRF IW +SAF +LD L+G+ R
Sbjct: 209 IIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWIESAFRKLDELYGTWR 268
Score = 59.3 bits (137), Expect = 1e-08
Identities = 28/57 (49%), Positives = 36/57 (63%)
Frame = +1
Query: 256 KSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 426
KS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 294 KSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 30.3 bits (65), Expect = 6.9
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +2
Query: 197 KKNFNLPQPKMANTDLTRL---PSLMRSGRS 280
K N+NLP +M NTDL+R+ P + R+ R+
Sbjct: 274 KSNYNLPMHEMINTDLSRILKSPEIQRALRA 304
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,964,073
Number of Sequences: 237096
Number of extensions: 1951381
Number of successful extensions: 4251
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4236
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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