Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40624
(796 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase interac... 91 6e-18
AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase interac... 91 6e-18
AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase interac... 91 6e-18
AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL... 91 6e-18
AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase interac... 91 6e-18
AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase interac... 91 6e-18
BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase interac... 73 2e-12
AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase interac... 73 2e-12
BC068478-1|AAH68478.1| 489|Homo sapiens chromosome 1 open readi... 33 1.2
BC029360-1|AAH29360.1| 230|Homo sapiens SUV39H2 protein protein. 33 1.2
AL360083-13|CAI40030.1| 175|Homo sapiens suppressor of variegat... 33 1.2
AL360083-12|CAI40028.1| 410|Homo sapiens suppressor of variegat... 33 1.2
AL360083-11|CAI40029.1| 230|Homo sapiens suppressor of variegat... 33 1.2
AL117352-7|CAB81621.1| 489|Homo sapiens chromosome 1 open readi... 33 1.2
AK027613-1|BAB55232.1| 489|Homo sapiens protein ( Homo sapiens ... 33 1.2
BC032561-1|AAH32561.1| 553|Homo sapiens UIMC1 protein protein. 30 8.4
AY587070-1|AAS99863.1| 381|Homo sapiens helios del(ex3,4) isofo... 30 8.4
AF284753-1|AAG59855.1| 349|Homo sapiens X2HRIP110 protein. 30 8.4
AF284749-1|AAG59851.1| 641|Homo sapiens XHRIP110 protein. 30 8.4
AF113538-1|AAF14875.1| 349|Homo sapiens retinoid x receptor int... 30 8.4
>AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 445
Score = 90.6 bits (215), Expect = 6e-18
Identities = 45/79 (56%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = +2
Query: 518 PPNL-KTSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQF-KNQTILFM 691
PP KT+LA++I++ KK ++++FV LSAT + NDV++++K A+N+ F K +TILF+
Sbjct: 49 PPGCGKTTLAHIIASNSKK-HSIRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKTILFI 107
Query: 692 DEIHRFNKLQQDTFLPHVE 748
DEIHRFNK QQDTFLPHVE
Sbjct: 108 DEIHRFNKSQQDTFLPHVE 126
>AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 665
Score = 90.6 bits (215), Expect = 6e-18
Identities = 45/79 (56%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = +2
Query: 518 PPNL-KTSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQF-KNQTILFM 691
PP KT+LA++I++ KK ++++FV LSAT + NDV++++K A+N+ F K +TILF+
Sbjct: 269 PPGCGKTTLAHIIASNSKK-HSIRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKTILFI 327
Query: 692 DEIHRFNKLQQDTFLPHVE 748
DEIHRFNK QQDTFLPHVE
Sbjct: 328 DEIHRFNKSQQDTFLPHVE 346
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +3
Query: 351 VNCPICNRSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPNEKRKKVEKL 509
V CP+C + I H+++CL L+ + S R G++ P+ K +L
Sbjct: 18 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRL 74
>AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 665
Score = 90.6 bits (215), Expect = 6e-18
Identities = 45/79 (56%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = +2
Query: 518 PPNL-KTSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQF-KNQTILFM 691
PP KT+LA++I++ KK ++++FV LSAT + NDV++++K A+N+ F K +TILF+
Sbjct: 269 PPGCGKTTLAHIIASNSKK-HSIRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKTILFI 327
Query: 692 DEIHRFNKLQQDTFLPHVE 748
DEIHRFNK QQDTFLPHVE
Sbjct: 328 DEIHRFNKSQQDTFLPHVE 346
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +3
Query: 351 VNCPICNRSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPNEKRKKVEKL 509
V CP+C + I H+++CL L+ + S R G++ P+ K +L
Sbjct: 18 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRL 74
>AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL
protein.
Length = 445
Score = 90.6 bits (215), Expect = 6e-18
Identities = 45/79 (56%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = +2
Query: 518 PPNL-KTSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQF-KNQTILFM 691
PP KT+LA++I++ KK ++++FV LSAT + NDV++++K A+N+ F K +TILF+
Sbjct: 49 PPGCGKTTLAHIIASNSKK-HSIRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKTILFI 107
Query: 692 DEIHRFNKLQQDTFLPHVE 748
DEIHRFNK QQDTFLPHVE
Sbjct: 108 DEIHRFNKSQQDTFLPHVE 126
>AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 646
Score = 90.6 bits (215), Expect = 6e-18
Identities = 45/79 (56%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = +2
Query: 518 PPNL-KTSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQF-KNQTILFM 691
PP KT+LA++I++ KK ++++FV LSAT + NDV++++K A+N+ F K +TILF+
Sbjct: 250 PPGCGKTTLAHIIASNSKK-HSIRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKTILFI 308
Query: 692 DEIHRFNKLQQDTFLPHVE 748
DEIHRFNK QQDTFLPHVE
Sbjct: 309 DEIHRFNKSQQDTFLPHVE 327
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +3
Query: 351 VNCPICNRSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPNEKRKKVEKL 509
V CP+C + I H+++CL L+ + S R G++ P+ K +L
Sbjct: 3 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRL 59
>AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase
interacting protein protein.
Length = 665
Score = 90.6 bits (215), Expect = 6e-18
Identities = 45/79 (56%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = +2
Query: 518 PPNL-KTSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQF-KNQTILFM 691
PP KT+LA++I++ KK ++++FV LSAT + NDV++++K A+N+ F K +TILF+
Sbjct: 269 PPGCGKTTLAHIIASNSKK-HSIRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKTILFI 327
Query: 692 DEIHRFNKLQQDTFLPHVE 748
DEIHRFNK QQDTFLPHVE
Sbjct: 328 DEIHRFNKSQQDTFLPHVE 346
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +3
Query: 351 VNCPICNRSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPNEKRKKVEKL 509
V CP+C + I H+++CL L+ + S R G++ P+ K +L
Sbjct: 18 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRL 74
>BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 72.5 bits (170), Expect = 2e-12
Identities = 37/71 (52%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Frame = +2
Query: 518 PPNL-KTSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQF-KNQTILFM 691
PP KT+LA++I++ KK ++++FV LSAT + NDV++++K A+N+ F K +TILF+
Sbjct: 269 PPGCGKTTLAHIIASNSKK-HSIRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKTILFI 327
Query: 692 DEIHRFNKLQQ 724
DEIHRFNK QQ
Sbjct: 328 DEIHRFNKSQQ 338
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +3
Query: 351 VNCPICNRSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPNEKRKKVEKL 509
V CP+C + I H+++CL L+ + S R G++ P+ K +L
Sbjct: 18 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRL 74
>AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 72.5 bits (170), Expect = 2e-12
Identities = 37/71 (52%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Frame = +2
Query: 518 PPNL-KTSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQF-KNQTILFM 691
PP KT+LA++I++ KK ++++FV LSAT + NDV++++K A+N+ F K +TILF+
Sbjct: 269 PPGCGKTTLAHIIASNSKK-HSIRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKTILFI 327
Query: 692 DEIHRFNKLQQ 724
DEIHRFNK QQ
Sbjct: 328 DEIHRFNKSQQ 338
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +3
Query: 351 VNCPICNRSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPNEKRKKVEKL 509
V CP+C + I H+++CL L+ + S R G++ P+ K +L
Sbjct: 18 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRL 74
>BC068478-1|AAH68478.1| 489|Homo sapiens chromosome 1 open reading
frame 124 protein.
Length = 489
Score = 33.1 bits (72), Expect = 1.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 333 SDCTKTVNCPICNRSFENTEIEEHVNKCL 419
S +K VNCP+C ++I EH++ CL
Sbjct: 448 SSQSKMVNCPVCQNEVLESQINEHLDWCL 476
>BC029360-1|AAH29360.1| 230|Homo sapiens SUV39H2 protein protein.
Length = 230
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 466 CCPCLFELDFSQELRKRHLFTCSSISVFSKLL 371
C PCL LD QEL ++ TC SI + + L
Sbjct: 13 CVPCLVSLDTLQELCRKEKLTCKSIGITKRNL 44
>AL360083-13|CAI40030.1| 175|Homo sapiens suppressor of variegation
3-9 homolog 2 (Drosophila) protein.
Length = 175
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 466 CCPCLFELDFSQELRKRHLFTCSSISVFSKLL 371
C PCL LD QEL ++ TC SI + + L
Sbjct: 2 CVPCLVSLDTLQELCRKEKLTCKSIGITKRNL 33
>AL360083-12|CAI40028.1| 410|Homo sapiens suppressor of variegation
3-9 homolog 2 (Drosophila) protein.
Length = 410
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 466 CCPCLFELDFSQELRKRHLFTCSSISVFSKLL 371
C PCL LD QEL ++ TC SI + + L
Sbjct: 13 CVPCLVSLDTLQELCRKEKLTCKSIGITKRNL 44
>AL360083-11|CAI40029.1| 230|Homo sapiens suppressor of variegation
3-9 homolog 2 (Drosophila) protein.
Length = 230
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 466 CCPCLFELDFSQELRKRHLFTCSSISVFSKLL 371
C PCL LD QEL ++ TC SI + + L
Sbjct: 13 CVPCLVSLDTLQELCRKEKLTCKSIGITKRNL 44
>AL117352-7|CAB81621.1| 489|Homo sapiens chromosome 1 open reading
frame 124 protein.
Length = 489
Score = 33.1 bits (72), Expect = 1.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 333 SDCTKTVNCPICNRSFENTEIEEHVNKCL 419
S +K VNCP+C ++I EH++ CL
Sbjct: 448 SSQSKMVNCPVCQNEVLESQINEHLDWCL 476
>AK027613-1|BAB55232.1| 489|Homo sapiens protein ( Homo sapiens
cDNA FLJ14707 fis, clone NT2RP3000599. ).
Length = 489
Score = 33.1 bits (72), Expect = 1.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 333 SDCTKTVNCPICNRSFENTEIEEHVNKCL 419
S +K VNCP+C ++I EH++ CL
Sbjct: 448 SSQSKMVNCPVCQNEVLESQINEHLDWCL 476
>BC032561-1|AAH32561.1| 553|Homo sapiens UIMC1 protein protein.
Length = 553
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 351 VNCPICNRSFENTEIEEHVNKCLFLNSCEKSNSKRQ 458
V+CP+C++ F T+IE H C L + ++RQ
Sbjct: 337 VSCPLCDQCFPPTKIERHAMYCNGLMEEDTVLTRRQ 372
>AY587070-1|AAS99863.1| 381|Homo sapiens helios del(ex3,4) isoform
protein.
Length = 381
Score = 30.3 bits (65), Expect = 8.4
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 270 NIRLGLKVSSPGS*N*KDKNMSDCTKTVNCPICNRSF-ENTEIEEHVNKC 416
N+ + L S+P + +M+ K C C RS+ + + +EEH +C
Sbjct: 24 NMAIDLTSSTPNGQHASPSHMTSMGKPHKCNYCGRSYKQRSSLEEHKERC 73
>AF284753-1|AAG59855.1| 349|Homo sapiens X2HRIP110 protein.
Length = 349
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 351 VNCPICNRSFENTEIEEHVNKCLFLNSCEKSNSKRQ 458
V+CP+C++ F T+IE H C L + ++RQ
Sbjct: 133 VSCPLCDQCFPPTKIERHAMYCNGLMEEDTVLTRRQ 168
>AF284749-1|AAG59851.1| 641|Homo sapiens XHRIP110 protein.
Length = 641
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 351 VNCPICNRSFENTEIEEHVNKCLFLNSCEKSNSKRQ 458
V+CP+C++ F T+IE H C L + ++RQ
Sbjct: 425 VSCPLCDQCFPPTKIERHAMYCNGLMEEDTVLTRRQ 460
>AF113538-1|AAF14875.1| 349|Homo sapiens retinoid x receptor
interacting protein protein.
Length = 349
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 351 VNCPICNRSFENTEIEEHVNKCLFLNSCEKSNSKRQ 458
V+CP+C++ F T+IE H C L + ++RQ
Sbjct: 133 VSCPLCDQCFPPTKIERHAMYCNGLMEEDTVLTRRQ 168
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,861,484
Number of Sequences: 237096
Number of extensions: 2202819
Number of successful extensions: 8564
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 8256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8556
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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