Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40622
(810 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 25 1.1
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 24 1.9
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 24 1.9
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.4
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.4
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.4
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.4
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.4
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 22 5.8
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 5.8
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 5.8
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 22 7.7
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 22 7.7
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 568 Y*CATESLIDVGFKLNLLNVTWRYVINL 651
Y C TE D+ F + + T Y +NL
Sbjct: 229 YPCCTEPYSDITFNITMRRKTLFYTVNL 256
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.8 bits (49), Expect = 1.9
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 568 Y*CATESLIDVGFKLNLLNVTWRYVINL 651
Y C E +D+ F + + T Y +NL
Sbjct: 220 YTCCDEPYLDITFNITMRRKTLFYTVNL 247
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 23.8 bits (49), Expect = 1.9
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 520 YNVIVIAKTTSKILYIY*CATESLIDVGFKLNLLNVTWRYVINL 651
+++I + ++ YI C E D+ F + L T Y +NL
Sbjct: 202 WDIIKVPAVRNEAFYI--CCEEPYPDIVFNITLRRKTLFYTVNL 243
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.4
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 568 Y*CATESLIDVGFKLNLLNVTWRYVINL 651
Y C E +DV F + + T Y NL
Sbjct: 174 YQCCPEPYVDVTFTIQIRRRTLYYFFNL 201
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.4
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 568 Y*CATESLIDVGFKLNLLNVTWRYVINL 651
Y C E +DV F + + T Y NL
Sbjct: 174 YQCCPEPYVDVTFTIQIRRRTLYYFFNL 201
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.4
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 568 Y*CATESLIDVGFKLNLLNVTWRYVINL 651
Y C E +DV F + + T Y NL
Sbjct: 174 YQCCPEPYVDVTFTIQIRRRTLYYFFNL 201
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.4
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 568 Y*CATESLIDVGFKLNLLNVTWRYVINL 651
Y C E +DV F + + T Y NL
Sbjct: 174 YQCCPEPYVDVTFTIQIRRRTLYYFFNL 201
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.4
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 568 Y*CATESLIDVGFKLNLLNVTWRYVINL 651
Y C E +DV F + + T Y NL
Sbjct: 174 YQCCPEPYVDVTFTIQIRRRTLYYFFNL 201
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.4
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 568 Y*CATESLIDVGFKLNLLNVTWRYVINL 651
Y C E +DV F + + T Y NL
Sbjct: 174 YQCCPEPYVDVTFTIQIRRRTLYYFFNL 201
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.4
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 568 Y*CATESLIDVGFKLNLLNVTWRYVINL 651
Y C E +DV F + + T Y NL
Sbjct: 242 YQCCPEPYVDVTFTIQIRRRTLYYFFNL 269
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.4
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 568 Y*CATESLIDVGFKLNLLNVTWRYVINL 651
Y C E +DV F + + T Y NL
Sbjct: 242 YQCCPEPYVDVTFTIQIRRRTLYYFFNL 269
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 22.2 bits (45), Expect = 5.8
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +3
Query: 576 CHGIP--D*CRFQIKFIKCYMALCYKLKMLY 662
C GI D C + +F KCY L + L+
Sbjct: 115 CKGIAKGDNCEYAYRFNKCYAELSPRTYYLF 145
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 568 Y*CATESLIDVGFKLNLLNVTWRYVINL 651
Y C E D+ F + L T Y +NL
Sbjct: 215 YPCCDEPYPDIFFNITLRRKTLFYTVNL 242
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 5.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 676 STSMLYNILSL*HNAM*HLINLI*NRHQSGIPWH 575
S S+L N+L L NA+ NL+ N + + P H
Sbjct: 383 SKSLLANVLDLEDNALASHNNLLNNVYSTPGPHH 416
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 21.8 bits (44), Expect = 7.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 503 LIDQDPCTYDNARM 462
L+DQ PCT D A +
Sbjct: 50 LLDQGPCTPDAAEL 63
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 21.8 bits (44), Expect = 7.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 503 LIDQDPCTYDNARM 462
L+DQ PCT D A +
Sbjct: 50 LLDQGPCTPDAAEL 63
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,881
Number of Sequences: 438
Number of extensions: 4340
Number of successful extensions: 21
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -