Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40619
         (778 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   2.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   2.4  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    22   5.5  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   7.3  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   7.3  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   7.3  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   7.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.7  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 376 YNDCSILQTETCYCFTAEIDRVV 444
           Y D +I   E C  FT E+DRV+
Sbjct: 120 YED-NIFLPEDCLLFTIELDRVL 141


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 376 YNDCSILQTETCYCFTAEIDRVV 444
           Y D +I   E C  FT E+DRV+
Sbjct: 135 YED-NIFLPEDCLLFTIELDRVL 156


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -2

Query: 444 HHPVYFCREAVTSFSLKDGTVVVTILRPLTLRNSPQSFSPDLL 316
           + P+YF  ++      K    V T+ RP  +R  P +   ++L
Sbjct: 436 YQPIYFVADSFEDAKEKFRRWVSTMSRPFEVRYDPYTQRVEIL 478


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 680 YYYTFIRSNKSLILVTFSFVFYW 748
           +Y+T +     +ILVT SF+ +W
Sbjct: 302 FYFTTVFI-PGIILVTSSFITFW 323


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 680 YYYTFIRSNKSLILVTFSFVFYW 748
           +Y+T +     +ILVT SF+ +W
Sbjct: 271 FYFTTVFI-PGIILVTSSFITFW 292


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 680 YYYTFIRSNKSLILVTFSFVFYW 748
           +Y+T +     +ILVT SF+ +W
Sbjct: 322 FYFTTVFI-PGIILVTSSFITFW 343


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 680 YYYTFIRSNKSLILVTFSFVFYW 748
           +Y+T +     +ILVT SF+ +W
Sbjct: 271 FYFTTVFI-PGIILVTSSFITFW 292


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 280 AESTTGSETRPTEKIRR 330
           A  TTG+ T PT ++R+
Sbjct: 252 AAMTTGTTTIPTRRLRK 268


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,887
Number of Sequences: 438
Number of extensions: 4512
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)