Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40618
(439 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein. 85 1e-16
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 85 1e-16
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 85 1e-16
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 85 1e-16
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 85 1e-16
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 85 1e-16
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 85 1e-16
BC139748-1|AAI39749.1| 307|Homo sapiens AQP12A protein protein. 33 0.43
BC041460-1|AAH41460.1| 265|Homo sapiens AQP12B protein protein. 33 0.43
AB040748-1|BAC45006.1| 295|Homo sapiens aquaporin X2 protein. 33 0.57
U78772-1|AAB70460.1| 750|Homo sapiens nuclear VCP-like protein ... 31 1.7
U68140-1|AAB70457.1| 856|Homo sapiens nuclear VCP-like protein ... 31 1.7
BC012105-1|AAH12105.1| 659|Homo sapiens NVL protein protein. 31 1.7
D49835-1|BAA23165.1| 1656|Homo sapiens DNA-binding protein protein. 30 3.0
BC110818-1|AAI10819.1| 646|Homo sapiens CHD7 protein protein. 30 3.0
BC080627-1|AAH80627.1| 628|Homo sapiens CHD7 protein protein. 30 3.0
BC068000-1|AAH68000.1| 594|Homo sapiens CHD7 protein protein. 30 3.0
BC053890-1|AAH53890.1| 594|Homo sapiens CHD7 protein protein. 30 3.0
BC014681-1|AAH14681.1| 637|Homo sapiens Unknown (protein for IM... 30 3.0
BC034491-1|AAH34491.1| 406|Homo sapiens chromosome 12 open read... 29 5.3
BC027600-1|AAH27600.1| 406|Homo sapiens chromosome 12 open read... 29 5.3
BC026075-1|AAH26075.1| 406|Homo sapiens chromosome 12 open read... 29 5.3
BC024183-1|AAH24183.1| 406|Homo sapiens chromosome 12 open read... 29 5.3
U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein. 29 7.0
U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein. 29 7.0
BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor, argini... 29 7.0
BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor, argini... 29 7.0
BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor, argini... 29 7.0
AK127525-1|BAC87019.1| 150|Homo sapiens protein ( Homo sapiens ... 29 7.0
AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens ... 29 7.0
AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens ... 29 7.0
AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isof... 29 7.0
AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isof... 29 7.0
AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor, argini... 29 7.0
BC112928-1|AAI12929.1| 1519|Homo sapiens KIAA0284 protein protein. 29 9.3
AB006622-1|BAA22953.3| 1573|Homo sapiens KIAA0284 protein protein. 29 9.3
>BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein.
Length = 475
Score = 84.6 bits (200), Expect = 1e-16
Identities = 46/76 (60%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +1
Query: 1 ISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXXD 180
I R HFEEAM+FARRSVSDNDIRKYEMFAQTLQQSRGFG +FRFP+
Sbjct: 400 IRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGG 458
Query: 181 QP--TFQEEGGDDDLY 222
+ E DDDLY
Sbjct: 459 GTGGSVYTEDNDDDLY 474
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 84.6 bits (200), Expect = 1e-16
Identities = 46/76 (60%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +1
Query: 1 ISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXXD 180
I R HFEEAM+FARRSVSDNDIRKYEMFAQTLQQSRGFG +FRFP+
Sbjct: 731 IRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGG 789
Query: 181 QP--TFQEEGGDDDLY 222
+ E DDDLY
Sbjct: 790 GTGGSVYTEDNDDDLY 805
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 84.6 bits (200), Expect = 1e-16
Identities = 46/76 (60%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +1
Query: 1 ISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXXD 180
I R HFEEAM+FARRSVSDNDIRKYEMFAQTLQQSRGFG +FRFP+
Sbjct: 731 IRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGG 789
Query: 181 QP--TFQEEGGDDDLY 222
+ E DDDLY
Sbjct: 790 GTGGSVYTEDNDDDLY 805
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 84.6 bits (200), Expect = 1e-16
Identities = 46/76 (60%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +1
Query: 1 ISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXXD 180
I R HFEEAM+FARRSVSDNDIRKYEMFAQTLQQSRGFG +FRFP+
Sbjct: 569 IRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGG 627
Query: 181 QP--TFQEEGGDDDLY 222
+ E DDDLY
Sbjct: 628 GTGGSVYTEDNDDDLY 643
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 84.6 bits (200), Expect = 1e-16
Identities = 46/76 (60%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +1
Query: 1 ISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXXD 180
I R HFEEAM+FARRSVSDNDIRKYEMFAQTLQQSRGFG +FRFP+
Sbjct: 731 IRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGG 789
Query: 181 QP--TFQEEGGDDDLY 222
+ E DDDLY
Sbjct: 790 GTGGSVYTEDNDDDLY 805
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 84.6 bits (200), Expect = 1e-16
Identities = 46/76 (60%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +1
Query: 1 ISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXXD 180
I R HFEEAM+FARRSVSDNDIRKYEMFAQTLQQSRGFG +FRFP+
Sbjct: 731 IRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGG 789
Query: 181 QP--TFQEEGGDDDLY 222
+ E DDDLY
Sbjct: 790 GTGGSVYTEDNDDDLY 805
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 84.6 bits (200), Expect = 1e-16
Identities = 46/76 (60%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +1
Query: 1 ISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXXD 180
I R HFEEAM+FARRSVSDNDIRKYEMFAQTLQQSRGFG +FRFP+
Sbjct: 731 IRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGG 789
Query: 181 QP--TFQEEGGDDDLY 222
+ E DDDLY
Sbjct: 790 GTGGSVYTEDNDDDLY 805
>BC139748-1|AAI39749.1| 307|Homo sapiens AQP12A protein protein.
Length = 307
Score = 33.1 bits (72), Expect = 0.43
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 203 GVTTTCT-AKLCLARDLGDLHHLDRPELTSCLFVLRVAPPH 322
G+ CT +LC A +L DLH L SC LR + PH
Sbjct: 121 GMQAACTLTRLCWAWELSDLHLLQSLMAQSCSSALRTSVPH 161
>BC041460-1|AAH41460.1| 265|Homo sapiens AQP12B protein protein.
Length = 265
Score = 33.1 bits (72), Expect = 0.43
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 203 GVTTTCT-AKLCLARDLGDLHHLDRPELTSCLFVLRVAPPH 322
G+ CT +LC A +L DLH L SC LR + PH
Sbjct: 47 GMQAACTLTRLCWAWELSDLHLLQSLMAQSCSSALRTSVPH 87
>AB040748-1|BAC45006.1| 295|Homo sapiens aquaporin X2 protein.
Length = 295
Score = 32.7 bits (71), Expect = 0.57
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 203 GVTTTCTA-KLCLARDLGDLHHLDRPELTSCLFVLRVAPPH 322
G+ CT +LC A +L DLH L SC LR + PH
Sbjct: 109 GMQAACTLMRLCWAWELSDLHLLQSLMAQSCSSALRTSVPH 149
>U78772-1|AAB70460.1| 750|Homo sapiens nuclear VCP-like protein
NVLp.1 protein.
Length = 750
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 1 ISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQ 102
+S HFEEA K R S+S D YE ++L +
Sbjct: 717 VSHKHFEEAFKKVRSSISKKDQIMYERLQESLSR 750
>U68140-1|AAB70457.1| 856|Homo sapiens nuclear VCP-like protein
NVLp.2 protein.
Length = 856
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 1 ISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQ 102
+S HFEEA K R S+S D YE ++L +
Sbjct: 823 VSHKHFEEAFKKVRSSISKKDQIMYERLQESLSR 856
>BC012105-1|AAH12105.1| 659|Homo sapiens NVL protein protein.
Length = 659
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 1 ISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQ 102
+S HFEEA K R S+S D YE ++L +
Sbjct: 626 VSHKHFEEAFKKVRSSISKKDQIMYERLQESLSR 659
>D49835-1|BAA23165.1| 1656|Homo sapiens DNA-binding protein protein.
Length = 1656
Score = 30.3 bits (65), Expect = 3.0
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +3
Query: 6 PRSLRGGDEVRAPLRVRQRHPQVRDVRADPAAEPR 110
P+ L GG R P V+ R P R A PAA+PR
Sbjct: 530 PQRLTGGGLQRPPAAVQVRDPAPRGHAALPAAQPR 564
>BC110818-1|AAI10819.1| 646|Homo sapiens CHD7 protein protein.
Length = 646
Score = 30.3 bits (65), Expect = 3.0
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 6 PRSLRGGDEVRAPLRVRQRHPQVRDVRADPAAEPRLRNQLQIPNKRGSYRGHGYFS 173
PR+++ D++RAP +Q+ PQ + + P+ P + Q + GSY G FS
Sbjct: 147 PRAVQVPDQIRAP--YQQQQPQPQPPQPAPSGPP-AQGHPQHMQQMGSYMARGDFS 199
>BC080627-1|AAH80627.1| 628|Homo sapiens CHD7 protein protein.
Length = 628
Score = 30.3 bits (65), Expect = 3.0
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 6 PRSLRGGDEVRAPLRVRQRHPQVRDVRADPAAEPRLRNQLQIPNKRGSYRGHGYFS 173
PR+++ D++RAP +Q+ PQ + + P+ P + Q + GSY G FS
Sbjct: 171 PRAVQVPDQIRAP--YQQQQPQPQPPQPAPSGPP-AQGHPQHMQQMGSYMARGDFS 223
>BC068000-1|AAH68000.1| 594|Homo sapiens CHD7 protein protein.
Length = 594
Score = 30.3 bits (65), Expect = 3.0
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 6 PRSLRGGDEVRAPLRVRQRHPQVRDVRADPAAEPRLRNQLQIPNKRGSYRGHGYFS 173
PR+++ D++RAP +Q+ PQ + + P+ P + Q + GSY G FS
Sbjct: 141 PRAVQVPDQIRAP--YQQQQPQPQPPQPAPSGPP-AQGHPQHMQQMGSYMARGDFS 193
>BC053890-1|AAH53890.1| 594|Homo sapiens CHD7 protein protein.
Length = 594
Score = 30.3 bits (65), Expect = 3.0
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 6 PRSLRGGDEVRAPLRVRQRHPQVRDVRADPAAEPRLRNQLQIPNKRGSYRGHGYFS 173
PR+++ D++RAP +Q+ PQ + + P+ P + Q + GSY G FS
Sbjct: 141 PRAVQVPDQIRAP--YQQQQPQPQPPQPAPSGPP-AQGHPQHMQQMGSYMARGDFS 193
>BC014681-1|AAH14681.1| 637|Homo sapiens Unknown (protein for
IMAGE:3866722) protein.
Length = 637
Score = 30.3 bits (65), Expect = 3.0
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 6 PRSLRGGDEVRAPLRVRQRHPQVRDVRADPAAEPRLRNQLQIPNKRGSYRGHGYFS 173
PR+++ D++RAP +Q+ PQ + + P+ P + Q + GSY G FS
Sbjct: 141 PRAVQVPDQIRAP--YQQQQPQPQPPQPAPSGPP-AQGHPQHMQQMGSYMARGDFS 193
>BC034491-1|AAH34491.1| 406|Homo sapiens chromosome 12 open reading
frame 12 protein.
Length = 406
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 217 GRRHPPPPGTWAGRPLKYPCPL*LPRLLGI 128
G PPPPG W K+PCP+ + R+ G+
Sbjct: 90 GPWRPPPPGFW-----KFPCPVQVFRVYGL 114
>BC027600-1|AAH27600.1| 406|Homo sapiens chromosome 12 open reading
frame 12 protein.
Length = 406
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 217 GRRHPPPPGTWAGRPLKYPCPL*LPRLLGI 128
G PPPPG W K+PCP+ + R+ G+
Sbjct: 90 GPWRPPPPGFW-----KFPCPVQVFRVYGL 114
>BC026075-1|AAH26075.1| 406|Homo sapiens chromosome 12 open reading
frame 12 protein.
Length = 406
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 217 GRRHPPPPGTWAGRPLKYPCPL*LPRLLGI 128
G PPPPG W K+PCP+ + R+ G+
Sbjct: 90 GPWRPPPPGFW-----KFPCPVQVFRVYGL 114
>BC024183-1|AAH24183.1| 406|Homo sapiens chromosome 12 open reading
frame 12 protein.
Length = 406
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 217 GRRHPPPPGTWAGRPLKYPCPL*LPRLLGI 128
G PPPPG W K+PCP+ + R+ G+
Sbjct: 90 GPWRPPPPGFW-----KFPCPVQVFRVYGL 114
>U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein.
Length = 288
Score = 29.1 bits (62), Expect = 7.0
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = -1
Query: 379 SDVCVTIAYVNRPGPGAMLVWWGDTQDKQTGR*FWSIEMVEIPEVASETQFSCTGRRHPP 200
+DV + +R G V++ + D + + +E+ FS T R H P
Sbjct: 145 ADVSIVYDQQSRRSRGFAFVYFENVDDAKEAK--ERANGMELDGRRIRVDFSITKRPHTP 202
Query: 199 PPGTWAGRP 173
PG + GRP
Sbjct: 203 TPGIYMGRP 211
>U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein.
Length = 288
Score = 29.1 bits (62), Expect = 7.0
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = -1
Query: 379 SDVCVTIAYVNRPGPGAMLVWWGDTQDKQTGR*FWSIEMVEIPEVASETQFSCTGRRHPP 200
+DV + +R G V++ + D + + +E+ FS T R H P
Sbjct: 145 ADVSIVYDQQSRRSRGFAFVYFENVDDAKEAK--ERANGMELDGRRIRVDFSITKRPHTP 202
Query: 199 PPGTWAGRP 173
PG + GRP
Sbjct: 203 TPGIYMGRP 211
>BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 29.1 bits (62), Expect = 7.0
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = -1
Query: 379 SDVCVTIAYVNRPGPGAMLVWWGDTQDKQTGR*FWSIEMVEIPEVASETQFSCTGRRHPP 200
+DV + +R G V++ + D + + +E+ FS T R H P
Sbjct: 145 ADVSIVYDQQSRRSRGFAFVYFENVDDAKEAK--ERANGMELDGRRIRVDFSITKRPHTP 202
Query: 199 PPGTWAGRP 173
PG + GRP
Sbjct: 203 TPGIYMGRP 211
>BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 29.1 bits (62), Expect = 7.0
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = -1
Query: 379 SDVCVTIAYVNRPGPGAMLVWWGDTQDKQTGR*FWSIEMVEIPEVASETQFSCTGRRHPP 200
+DV + +R G V++ + D + + +E+ FS T R H P
Sbjct: 145 ADVSIVYDQQSRRSRGFAFVYFENVDDAKEAK--ERANGMELDGRRIRVDFSITKRPHTP 202
Query: 199 PPGTWAGRP 173
PG + GRP
Sbjct: 203 TPGIYMGRP 211
>BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 29.1 bits (62), Expect = 7.0
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = -1
Query: 379 SDVCVTIAYVNRPGPGAMLVWWGDTQDKQTGR*FWSIEMVEIPEVASETQFSCTGRRHPP 200
+DV + +R G V++ + D + + +E+ FS T R H P
Sbjct: 145 ADVSIVYDQQSRRSRGFAFVYFENVDDAKEAK--ERANGMELDGRRIRVDFSITKRPHTP 202
Query: 199 PPGTWAGRP 173
PG + GRP
Sbjct: 203 TPGIYMGRP 211
>AK127525-1|BAC87019.1| 150|Homo sapiens protein ( Homo sapiens
cDNA FLJ45618 fis, clone BRTHA3027171. ).
Length = 150
Score = 29.1 bits (62), Expect = 7.0
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 292 SVCPACRPTTPTWR 333
+ CP C PT PTWR
Sbjct: 132 TACPVCCPTPPTWR 145
>AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens
cDNA FLJ42789 fis, clone BRAWH3007221. ).
Length = 163
Score = 29.1 bits (62), Expect = 7.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 208 HPPPPGTWAGRPLKYPCP 155
HP PP T RPL PCP
Sbjct: 3 HPRPPSTPPPRPLSTPCP 20
>AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ40872 fis, clone TUTER2000283, highly similar to
Homo sapiens transformer-2-beta (SFRS10) gene. ).
Length = 252
Score = 29.1 bits (62), Expect = 7.0
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = -1
Query: 379 SDVCVTIAYVNRPGPGAMLVWWGDTQDKQTGR*FWSIEMVEIPEVASETQFSCTGRRHPP 200
+DV + +R G V++ + D + + +E+ FS T R H P
Sbjct: 109 ADVSIVYDQQSRRSRGFAFVYFENVDDAKEAK--ERANGMELDGRRIRVDFSITKRPHTP 166
Query: 199 PPGTWAGRP 173
PG + GRP
Sbjct: 167 TPGIYMGRP 175
>AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isoform
3 protein.
Length = 188
Score = 29.1 bits (62), Expect = 7.0
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = -1
Query: 379 SDVCVTIAYVNRPGPGAMLVWWGDTQDKQTGR*FWSIEMVEIPEVASETQFSCTGRRHPP 200
+DV + +R G V++ + D + + +E+ FS T R H P
Sbjct: 45 ADVSIVYDQQSRRSRGFAFVYFENVDDAKEAK--ERANGMELDGRRIRVDFSITKRPHTP 102
Query: 199 PPGTWAGRP 173
PG + GRP
Sbjct: 103 TPGIYMGRP 111
>AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isoform
1 protein.
Length = 288
Score = 29.1 bits (62), Expect = 7.0
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = -1
Query: 379 SDVCVTIAYVNRPGPGAMLVWWGDTQDKQTGR*FWSIEMVEIPEVASETQFSCTGRRHPP 200
+DV + +R G V++ + D + + +E+ FS T R H P
Sbjct: 145 ADVSIVYDQQSRRSRGFAFVYFENVDDAKEAK--ERANGMELDGRRIRVDFSITKRPHTP 202
Query: 199 PPGTWAGRP 173
PG + GRP
Sbjct: 203 TPGIYMGRP 211
>AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) va protein.
Length = 278
Score = 29.1 bits (62), Expect = 7.0
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = -1
Query: 379 SDVCVTIAYVNRPGPGAMLVWWGDTQDKQTGR*FWSIEMVEIPEVASETQFSCTGRRHPP 200
+DV + +R G V++ + D + + +E+ FS T R H P
Sbjct: 133 ADVSIVYDQQSRRSRGFAFVYFENVDDAKEAK--ERANGMELDGRRIRVDFSITKRPHTP 190
Query: 199 PPGTWAGRP 173
PG + GRP
Sbjct: 191 TPGIYMGRP 199
>BC112928-1|AAI12929.1| 1519|Homo sapiens KIAA0284 protein protein.
Length = 1519
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 18 RGGD-EVRAPLRVRQRHPQVRDVRADPAAEP 107
RGG+ E P+R+R+R PQ+ RAD A P
Sbjct: 615 RGGEPEGSLPVRMRRRLPQLPSERADSPAGP 645
>AB006622-1|BAA22953.3| 1573|Homo sapiens KIAA0284 protein protein.
Length = 1573
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 18 RGGD-EVRAPLRVRQRHPQVRDVRADPAAEP 107
RGG+ E P+R+R+R PQ+ RAD A P
Sbjct: 704 RGGEPEGSLPVRMRRRLPQLPSERADSPAGP 734
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,073,807
Number of Sequences: 237096
Number of extensions: 1374841
Number of successful extensions: 3934
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 3700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3925
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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