Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40611
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   5.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   5.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   5.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   5.4  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              21   9.4  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 276 VVTLKKPWTRWTDECWTAGNF 338
           +V++ K W +W D   T  N+
Sbjct: 689 LVSVNKSWNKWNDWQETQNNY 709


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 276 VVTLKKPWTRWTDECWTAGNF 338
           +V++ K W +W D   T  N+
Sbjct: 689 LVSVNKSWNKWNDWQETQNNY 709


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 19/63 (30%), Positives = 25/63 (39%)
 Frame = +3

Query: 201 VGDIYIPRDRYTRESRGFPS*GFSSVVTLKKPWTRWTDECWTAGNFAFRWRDMVAPHRHT 380
           + + Y P+      SR +P   F    T+ K   R  DE         RWRD +    HT
Sbjct: 267 IPEAYFPKLDSLVASRTWP---FRPSGTVLKDINRQVDELNFDIQDLERWRDRIYEAIHT 323

Query: 381 GVV 389
           G V
Sbjct: 324 GSV 326


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 276 VVTLKKPWTRWTDECWTAGNF 338
           +V++ K W +W D   T  N+
Sbjct: 689 LVSVNKSWNKWNDWQETQNNY 709


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -2

Query: 701 CYIECVVTMFTIVRSEGG 648
           CY  CV+  F ++  + G
Sbjct: 70  CYFNCVLEKFNVMDKKNG 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,422
Number of Sequences: 438
Number of extensions: 3657
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)