Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40608
         (746 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q08V43 Cluster: Putative uncharacterized protein; n=1; ...    36   1.4  
UniRef50_A7AD36 Cluster: Putative uncharacterized protein; n=2; ...    34   3.2  
UniRef50_Q59VC8 Cluster: Putative uncharacterized protein; n=2; ...    33   7.5  

>UniRef50_Q08V43 Cluster: Putative uncharacterized protein; n=1;
           Stigmatella aurantiaca DW4/3-1|Rep: Putative
           uncharacterized protein - Stigmatella aurantiaca DW4/3-1
          Length = 740

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = -2

Query: 523 VLKEKRILG-NIKLHLKLLSPTIYNINDYKNKLRGDPPLPLTL 398
           +LKEK  LG N+ LH+KL  PT   + D   ++ G+P  PL L
Sbjct: 76  LLKEKTALGENVALHVKLPPPTNRKLEDSLVRVVGEPEKPLVL 118


>UniRef50_A7AD36 Cluster: Putative uncharacterized protein; n=2;
           Bacteroidales|Rep: Putative uncharacterized protein -
           Parabacteroides merdae ATCC 43184
          Length = 354

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = -3

Query: 741 ELTWRATTARGERMALTVTRHVCHTGXQQLNATASMECLVNL*LTFKNPILFLFRILFKA 562
           +L WR  + RG R+  T +  V H G   LN  +  +  +N    F+N +L L++ L + 
Sbjct: 215 DLCWRLRS-RGYRLVCTPSSVVYHVGGATLNVESPRKTFLN----FRNNLLMLYKNLPEK 269

Query: 561 DARRSRHA 538
           D +   HA
Sbjct: 270 DLKHVMHA 277


>UniRef50_Q59VC8 Cluster: Putative uncharacterized protein; n=2;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 584

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 21/75 (28%), Positives = 41/75 (54%)
 Frame = -2

Query: 499 GNIKLHLKLLSPTIYNINDYKNKLRGDPPLPLTLHSLRRQRRIEQQHFQVKLFSRQKYKS 320
           G+  L L+  +P  +N+ D  ++  GD      LHSL ++  +    F  K+ +R +YKS
Sbjct: 240 GSSILKLETATPGDFNLID--DEENGDE----MLHSLGKEGEVPNNLFFKKIIARPRYKS 293

Query: 319 VIKIFF*EKINSFPI 275
            +KI+F  ++ ++ +
Sbjct: 294 NMKIYFIPEVANYSL 308


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,859,918
Number of Sequences: 1657284
Number of extensions: 11229107
Number of successful extensions: 27750
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27746
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)