Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40606
(261 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97; Eukary... 104 4e-22
UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14; Eukary... 99 2e-20
UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39; Euka... 89 2e-17
UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8; Dikarya... 85 4e-16
UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6; Pezizo... 83 9e-16
UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27 pir|... 76 1e-13
UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4; Trypano... 72 2e-12
UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6; Trypano... 70 1e-11
UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1; Dictyos... 68 5e-11
UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7; Fungi/M... 62 3e-09
UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1; ... 56 2e-07
UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, wh... 53 1e-06
UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2; ... 53 1e-06
UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramec... 52 3e-06
UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3; Trichom... 52 3e-06
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 50 8e-06
UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n... 50 1e-05
UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2; Cryptos... 43 0.001
UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal ... 43 0.002
UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;... 41 0.006
UniRef50_UPI00006CAB39 Cluster: hypothetical protein TTHERM_0078... 40 0.008
UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1; Encepha... 38 0.033
UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillar... 38 0.058
UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila melanogaste... 33 1.7
UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3; Oe... 33 1.7
UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1; ... 32 2.2
UniRef50_UPI00006CB01E Cluster: Kinesin motor domain containing ... 31 5.1
UniRef50_A7LZU6 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_A3DJZ0 Cluster: HAD-superfamily hydrolase, subfamily IA... 31 5.1
UniRef50_Q7RPX5 Cluster: Putative uncharacterized protein PY0132... 31 5.1
UniRef50_Q53KY4 Cluster: Retrotransposon protein, putative, Ty3-... 31 6.7
UniRef50_Q7RDC7 Cluster: AT hook motif, putative; n=5; Plasmodiu... 31 6.7
UniRef50_A0EE49 Cluster: Chromosome undetermined scaffold_91, wh... 31 6.7
UniRef50_Q9FMZ9 Cluster: Similarity to PHD-type zinc finger prot... 30 8.9
UniRef50_Q23ZD5 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
>UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97;
Eukaryota|Rep: 60S ribosomal protein L27 - Homo sapiens
(Human)
Length = 136
Score = 104 bits (249), Expect = 4e-22
Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
Frame = +2
Query: 2 IHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEER 175
I KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEER
Sbjct: 62 IAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEER 121
Query: 176 YKSGKNKWFFQKLRF 220
YK+GKNKWFFQKLRF
Sbjct: 122 YKTGKNKWFFQKLRF 136
>UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14;
Eukaryota|Rep: 60S ribosomal protein L27 -
Caenorhabditis elegans
Length = 136
Score = 98.7 bits (235), Expect = 2e-20
Identities = 43/75 (57%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
Frame = +2
Query: 2 IHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEER 175
I KR+K+KPF+KVV+Y HL+PTRY+VD +F+K + + LK P+K++K + +FEER
Sbjct: 62 IEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEER 121
Query: 176 YKSGKNKWFFQKLRF 220
YK+GKNKWFF KLRF
Sbjct: 122 YKTGKNKWFFTKLRF 136
>UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39;
Eukaryota|Rep: 60S ribosomal protein L27-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 136
Score = 88.6 bits (210), Expect = 2e-17
Identities = 39/75 (52%), Positives = 56/75 (74%), Gaps = 2/75 (2%)
Frame = +2
Query: 2 IHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEER 175
+ KR+KIKPF+KVVNYNHL+PTRYT+D K S + + P++R++ + + FEER
Sbjct: 62 VAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEER 121
Query: 176 YKSGKNKWFFQKLRF 220
+++GKN+WFF KLRF
Sbjct: 122 HQAGKNQWFFSKLRF 136
>UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8;
Dikarya|Rep: 60S ribosomal protein L27 - Ustilago maydis
(Smut fungus)
Length = 190
Score = 84.6 bits (200), Expect = 4e-16
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Frame = +2
Query: 2 IHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEER 175
I KRSK+KPFVKV++YNHLMPTRY ++ K + K+P++R+ + + FEE+
Sbjct: 116 IAKRSKVKPFVKVISYNHLMPTRYALELEGLKGAVTQDTFKEPSQREDAKKQIKQIFEEK 175
Query: 176 YKSGKNKWFFQKLRF 220
Y SGKNKWFF LRF
Sbjct: 176 YTSGKNKWFFTPLRF 190
>UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6;
Pezizomycotina|Rep: 60S ribosomal protein L27e -
Aspergillus fumigatus (Sartorya fumigata)
Length = 186
Score = 83.4 bits (197), Expect = 9e-16
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = +2
Query: 2 IHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEER 175
+ KRS+IKPF+K+VNYNHLMPTRYT++ K S + K+ + R+ + + E+R
Sbjct: 112 VEKRSRIKPFIKIVNYNHLMPTRYTLELEGLKGAISQETFKEVSTREDAKKTVKKALEDR 171
Query: 176 YKSGKNKWFFQKLRF 220
Y SGKN+WFF LRF
Sbjct: 172 YTSGKNRWFFTPLRF 186
>UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27
pir||T06451 ribosomal protein L27- garden pea; n=1;
Ostreococcus tauri|Rep: RL27_PEA 60S ribosomal protein
L27 pir||T06451 ribosomal protein L27- garden pea -
Ostreococcus tauri
Length = 184
Score = 76.2 bits (179), Expect = 1e-13
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = +2
Query: 8 KRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRK-KLRFNTRVRFEERYKS 184
KRSK K F+K +NY+HLMPTRYT+D +F+ D+ D A +K + + EER+K+
Sbjct: 113 KRSKCKTFIKNINYSHLMPTRYTLDVNFKDVVTSDVLDNATKKVAAQKEAKKLLEERFKT 172
Query: 185 GKNKWFFQKLRF 220
GK++WFF +L F
Sbjct: 173 GKSRWFFTRLAF 184
>UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 133
Score = 72.1 bits (169), Expect = 2e-12
Identities = 30/73 (41%), Positives = 48/73 (65%)
Frame = +2
Query: 2 IHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYK 181
I +RS++ F++VVN+ H +PTRY +D S E ++ D +K+ + + R F+ RY
Sbjct: 61 IQRRSRVGVFLRVVNHKHFLPTRYNMDLSRELRGRINVSDASKKARSKQLVRKLFQARYN 120
Query: 182 SGKNKWFFQKLRF 220
+G N+WFFQ+LRF
Sbjct: 121 AGSNRWFFQRLRF 133
>UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 134
Score = 69.7 bits (163), Expect = 1e-11
Identities = 31/73 (42%), Positives = 47/73 (64%)
Frame = +2
Query: 2 IHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYK 181
I +RS++ F++VVN+ H +PTRY VD S E ++ D +KR + + R F+ RY
Sbjct: 62 IARRSQVGVFLRVVNHKHFLPTRYNVDMSKELRGKINVSDASKRSRSKRLVRHVFQARYN 121
Query: 182 SGKNKWFFQKLRF 220
+G + WFFQ+LRF
Sbjct: 122 AGSSMWFFQRLRF 134
>UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L27 - Dictyostelium discoideum AX4
Length = 144
Score = 67.7 bits (158), Expect = 5e-11
Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
Frame = +2
Query: 2 IHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK-FS------AKDLKDPAKRKKLRFNTRV 160
I KR+ I+ FVKVVNYNH+MPTRY + E F+ + AKR R +
Sbjct: 65 ILKRTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQVAKRAHTRLAVKK 124
Query: 161 RFEERYKSGKNKWFFQKLRF 220
FE ++K+GK+KWFF KLRF
Sbjct: 125 IFEAKHKAGKSKWFFSKLRF 144
>UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7;
Fungi/Metazoa group|Rep: 60S ribosomal protein L27 -
Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
Length = 138
Score = 61.7 bits (143), Expect = 3e-09
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Frame = +2
Query: 8 KRSKIKPFVKVVNYNHLMPTRYTVD-FSFEK---FSAKDLKDPAKRKKLRFNTRVRFEER 175
+R+++K F K +NYNHLM TRY+V F +K F K+ + RK+ + + ER
Sbjct: 64 RRTRVKAFAKFINYNHLMFTRYSVQLFPEDKAKTFGPDRWKNFSDRKEFKKELQTVMRER 123
Query: 176 YKSGKNKWFFQKLRF 220
+ + KN+WFF KLRF
Sbjct: 124 FLAAKNRWFFTKLRF 138
>UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1;
Tribolium castaneum|Rep: Putative uncharacterized
protein - Tribolium castaneum (Red flour beetle)
Length = 95
Score = 55.6 bits (128), Expect = 2e-07
Identities = 30/71 (42%), Positives = 40/71 (56%)
Frame = +2
Query: 8 KRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSG 187
+R + +P V + H+ P S K K P KRK++RF TRV+ +E KSG
Sbjct: 25 QRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQEGSKSG 84
Query: 188 KNKWFFQKLRF 220
+NKWFFQK RF
Sbjct: 85 RNKWFFQKGRF 95
>UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=8; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_10, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1051
Score = 53.2 bits (122), Expect = 1e-06
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 18/91 (19%)
Frame = +2
Query: 2 IHKRSKIKPFVKVVNYNHLMPTRYTVDFS--------FEKFSAKDLKDPAKRKKLRFNTR 157
I KR+ +K F+K +N NH+MPTRY ++ S E+ +LK+ KRK+LR N R
Sbjct: 961 IRKRTTLKVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKESELKNVEKRKELRKNLR 1020
Query: 158 VRFEERY----------KSGKNKWFFQKLRF 220
E+Y K ++++ F KLRF
Sbjct: 1021 KYLAEKYRTLPAGSLADKKAQSRFLFSKLRF 1051
>UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L27 - Entamoeba histolytica HM-1:IMSS
Length = 139
Score = 52.8 bits (121), Expect = 1e-06
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Frame = +2
Query: 11 RSKIKPFVKVVNYNHLMPTRYTVDFSFEKFS-AKDLK----DPAKRKKLRFNTRV--RFE 169
R+ +K F KV+N NH+MPT+YTV + E+F+ K +K + K + + +F
Sbjct: 65 RTSVKSFCKVINVNHVMPTKYTV--NLEQFNLIKQVKINNFEAGKVYPISQKKAISSQFA 122
Query: 170 ERYKSGKNKWFFQKLRF 220
E Y+ GK W F KLRF
Sbjct: 123 EEYRKGKESWLFTKLRF 139
>UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramecium
tetraurelia|Rep: 60S ribosomal protein L27 - Paramecium
tetraurelia
Length = 262
Score = 52.0 bits (119), Expect = 3e-06
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 18/91 (19%)
Frame = +2
Query: 2 IHKRSKIKPFVKVVNYNHLMPTRYTVDFS--------FEKFSAKDLKDPAKRKKLRFNTR 157
I KR+ +K F+K +N NH+MPTRY ++ S E+ +LK+ KRK LR N R
Sbjct: 172 IRKRTTLKVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKEAELKNVEKRKDLRKNLR 231
Query: 158 VRFEERY----------KSGKNKWFFQKLRF 220
E+Y K ++++ F KLRF
Sbjct: 232 KYLAEKYRTLPAGSLADKKAQSRFLFSKLRF 262
>UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L27
- Trichomonas vaginalis G3
Length = 139
Score = 51.6 bits (118), Expect = 3e-06
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Frame = +2
Query: 8 KRSKIKPFVKVVNYNHLMPTRYTV---DFSFEKFSAKD----LKDPAKRKKLRFNTRVRF 166
K++++K FVK VN+NH+M TR+ V DF F+K S + LKD +K L
Sbjct: 63 KKTQVKLFVKAVNFNHVMLTRHNVKDEDF-FKKISVEKVVAALKDAPAKKALLTEYAAVL 121
Query: 167 EERYKSGKNKWFFQKLRF 220
++Y + K WFF+ L+F
Sbjct: 122 RQKYLNNKMAWFFKPLQF 139
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 50.4 bits (115), Expect = 8e-06
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +2
Query: 11 RSKIKPFVKVVNYNHLMPTRYTVDFSFEKF-SAKDLKDPAKRKKLRFNTRVRFEERYKSG 187
R +++ FVK +N NHLMPT ++ +++ F S + + D KR+++ F+ R
Sbjct: 63 RGRVRSFVKCMNVNHLMPTSCRLENNYKDFISTQTVADVTKRREIIETVNKDFQRRILEH 122
Query: 188 KNKWFFQKL 214
++ WFF KL
Sbjct: 123 RDTWFFTKL 131
>UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L27e, putative -
Theileria parva
Length = 148
Score = 50.0 bits (114), Expect = 1e-05
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +2
Query: 2 IHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK---FSAKDLKDPAKRKKLRFNTRVRFEE 172
I KR K+K FVK VN NHLMPTRY V + + S + +++ + RK+ R + + EE
Sbjct: 62 IEKRLKLKAFVKYVNVNHLMPTRYMVTTTLDPKSLVSDEQMENKSSRKEARKSVKAVLEE 121
Query: 173 RYKSGKN 193
+ + +N
Sbjct: 122 CFSNPEN 128
>UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L27 -
Cryptosporidium parvum Iowa II
Length = 162
Score = 43.2 bits (97), Expect = 0.001
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 11/84 (13%)
Frame = +2
Query: 2 IHKRSKIKPFVKVVNYNHLMPTRYTV-DFSFEK-FSAKDLKDPAKRKK------LRFNTR 157
+ K+S IKPF+K +N NH+MPTRY V DF + D+++ +K+ L FN +
Sbjct: 79 LKKKSTIKPFLKSINMNHVMPTRYVVSDFDIKPLLQGIDMQEADGKKQALRALHLAFNDK 138
Query: 158 -VRFE-ERYKSGKNKWFFQK-LRF 220
+ + E+ K+ K+ F +K LRF
Sbjct: 139 LINIQSEKGKAPKDLIFLRKPLRF 162
>UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal
protein L27; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L27 - Monodelphis domestica
Length = 124
Score = 42.7 bits (96), Expect = 0.002
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = +2
Query: 2 IHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK 97
I KRSKIK FV V NYNHL RY+VD +K
Sbjct: 46 ISKRSKIKFFVAVYNYNHLKSIRYSVDIPLDK 77
>UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;
Plasmodium|Rep: 60S ribosomal protein L27 homolog -
Plasmodium yoelii yoelii
Length = 181
Score = 40.7 bits (91), Expect = 0.006
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +2
Query: 2 IHKRSKIKPFVKVVNYNHLMPTRY 73
I KRSK+K FVK +N NH++PTRY
Sbjct: 154 IIKRSKVKAFVKYINVNHILPTRY 177
>UniRef50_UPI00006CAB39 Cluster: hypothetical protein
TTHERM_00780960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00780960 - Tetrahymena
thermophila SB210
Length = 128
Score = 40.3 bits (90), Expect = 0.008
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2
Query: 2 IHKRSKIKPFVKVVNYNHLMPTR 70
I KR+ +KPF+K VN NH+MPTR
Sbjct: 77 IQKRTSVKPFIKYVNLNHIMPTR 99
>UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L27
- Encephalitozoon cuniculi
Length = 126
Score = 38.3 bits (85), Expect = 0.033
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 8 KRSKIKPFVKVVNYN--HLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFN-TRVRFEERY 178
KR K ++ + YN HL+ TRY D ++D A+ KK+ N T+ + +
Sbjct: 53 KRRNAKFYIILKKYNIAHLIATRYKADLGLATIDYSGIEDNAETKKVLTNKTKDAMMKAW 112
Query: 179 KSGKNKWFFQKLRF 220
K K K+ F L F
Sbjct: 113 KENKAKFLFSSLSF 126
>UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillardia
theta|Rep: 60S ribosomal protein L27 - Guillardia theta
(Cryptomonas phi)
Length = 144
Score = 37.5 bits (83), Expect = 0.058
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
Frame = +2
Query: 17 KIKPFVKVVNYNHLMPTRYTVD-----------FSFEKFSAKDLKDPAKRKKLRF-NTRV 160
+ K F+K +N H+ PTRY ++ + K K + ++ K+ +
Sbjct: 65 RFKTFIKTINIKHVFPTRYVIETDDVFKTLIDAYYTNKLGNKLNEHTNEKAKVNLVSINN 124
Query: 161 RFEERYKSGKNKWFFQKLRF 220
++R GKN WFF+K++F
Sbjct: 125 YLQDRLLRGKNLWFFKKMKF 144
>UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila
melanogaster|Rep: CG17050-PA - Drosophila melanogaster
(Fruit fly)
Length = 506
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 62 PTRYTVDFSFEKFSAKDLKDPAKRKKLRF 148
P Y +F FE+F KDL+ AK K L+F
Sbjct: 60 PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88
>UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3;
Oenothera|Rep: Putative membrane protein ycf1 - Oenothera
hookeri (Hooker's evening primrose)
Length = 2434
Score = 32.7 bits (71), Expect = 1.7
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 53 HLMPTRYTVDFS-FEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKW 199
HL RY + + +F K+LKD + ++L F+++++ + SGKN+W
Sbjct: 1628 HLDKLRYVLQYDGTSRFLKKELKDYFEAQEL-FHSKLKHKNSLNSGKNQW 1676
>UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina mazei|Rep: Putative uncharacterized
protein - Methanosarcina mazei (Methanosarcina frisia)
Length = 1110
Score = 32.3 bits (70), Expect = 2.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 83 FSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKS 184
FSFE+F A +PA R +RF R R E +S
Sbjct: 459 FSFERFGATGTGEPALRGSVRFTLRFRMSEETES 492
>UniRef50_UPI00006CB01E Cluster: Kinesin motor domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Kinesin
motor domain containing protein - Tetrahymena
thermophila SB210
Length = 974
Score = 31.1 bits (67), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 35 KVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKL 142
K++ YN P YT +F +EK ++ KRK++
Sbjct: 883 KILEYNEYSPHYYTCEFGYEKCDIQECSKLIKRKEI 918
>UniRef50_A7LZU6 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 265
Score = 31.1 bits (67), Expect = 5.1
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 50 NHLMPTRYTVD-FSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWF 202
N L P+ Y+VD ++++S K L PA KLRF R YK G N F
Sbjct: 207 NDLRPSTYSVDNVEWQQYS-KTLLAPATANKLRFEVRT-----YKEGDNSGF 252
>UniRef50_A3DJZ0 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 3; n=1; Clostridium thermocellum ATCC 27405|Rep:
HAD-superfamily hydrolase, subfamily IA, variant 3 -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 223
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +2
Query: 47 YNHLMPTRYT--VDFSFEKFSAKDLKDPAKR 133
Y +PT YT DFSF + AKDLKD A++
Sbjct: 181 YTIAVPTVYTNKQDFSFVNYVAKDLKDAAEK 211
>UniRef50_Q7RPX5 Cluster: Putative uncharacterized protein PY01329;
n=18; Plasmodium (Vinckeia)|Rep: Putative
uncharacterized protein PY01329 - Plasmodium yoelii
yoelii
Length = 5432
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 44 NYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRV 160
NY+ ++PT+Y F FS ++ D +K++K N R+
Sbjct: 551 NYDVVIPTKYDFQFKLSNFSI-NIYDDSKKRKYIINNRI 588
>UniRef50_Q53KY4 Cluster: Retrotransposon protein, putative,
Ty3-gypsy sub-class; n=7; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
Ty3-gypsy sub-class - Oryza sativa subsp. japonica
(Rice)
Length = 1333
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -1
Query: 162 RTRVLKRSFLRFAGSFRSFALNFSKL 85
RT L RSFL AG +R F NFSK+
Sbjct: 760 RTVTLVRSFLGLAGYYRRFIENFSKI 785
>UniRef50_Q7RDC7 Cluster: AT hook motif, putative; n=5; Plasmodium
(Vinckeia)|Rep: AT hook motif, putative - Plasmodium
yoelii yoelii
Length = 1502
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +2
Query: 50 NHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKW 199
N++ R TV S +K S K+ K KR+ + V +E YK+GKN +
Sbjct: 1286 NNIKYARSTVSESDDKHSDKENKKIHKRRGRPRKSDVESQEDYKNGKNNF 1335
>UniRef50_A0EE49 Cluster: Chromosome undetermined scaffold_91, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_91,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 620
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/74 (20%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 2 IHKRSKIKPFVKVVNYNHLMPTRYTVDFSF--EKFSAKDLKDPAKRKKLRFNTRVRFEER 175
+ ++ +++PF ++VN P + T D +++ + L+ + ++ R+ +R E
Sbjct: 259 VQQKPQVQPFKQIVNLQQQSPPKITSDIGIQDDQYRLEQLERERQEEQFRYQEYLRQLEE 318
Query: 176 YKSGKNKWFFQKLR 217
K + + F ++LR
Sbjct: 319 EKRRQQEEFEKQLR 332
>UniRef50_Q9FMZ9 Cluster: Similarity to PHD-type zinc finger
protein; n=1; Arabidopsis thaliana|Rep: Similarity to
PHD-type zinc finger protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 557
Score = 30.3 bits (65), Expect = 8.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 146 FNTRVRFEERYKSGKNKWFF 205
+N R + E+RYKS K KWF+
Sbjct: 58 YNKRNKKEQRYKSPKGKWFY 77
>UniRef50_Q23ZD5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1149
Score = 30.3 bits (65), Expect = 8.9
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 59 MPTRYTVDFSFEKFSAKDLK--DPAKRKKLRFNTRVRFEERYKSGKNKWFFQK 211
+ TR+ + F+KF +DLK D K +++ N R + E+ KS K K K
Sbjct: 875 LSTRFQRNKFFDKFIQQDLKNDDKIKSEEMLINKRQKIAEQTKSNKFKKLVNK 927
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,130,895
Number of Sequences: 1657284
Number of extensions: 3247327
Number of successful extensions: 9002
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 8866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8987
length of database: 575,637,011
effective HSP length: 64
effective length of database: 469,570,835
effective search space used: 10330558370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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