Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40606
         (261 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L19527-1|AAA19815.1|  136|Homo sapiens ribosomal protein L27 pro...   104   6e-23
L05094-1|AAC15857.1|  136|Homo sapiens ribosomal protein L27 pro...   104   6e-23
BC098560-1|AAH98560.1|  136|Homo sapiens ribosomal protein L27 p...   104   6e-23
BC021886-1|AAH21886.1|  140|Homo sapiens RPL27 protein protein.       104   6e-23
BC010026-1|AAH10026.1|  136|Homo sapiens ribosomal protein L27 p...   104   6e-23
BC007273-1|AAH07273.1|  136|Homo sapiens ribosomal protein L27 p...   104   6e-23
BC002588-1|AAH02588.1|  136|Homo sapiens ribosomal protein L27 p...   104   6e-23
BC001700-1|AAH01700.1|  136|Homo sapiens ribosomal protein L27 p...   104   6e-23
AB061851-1|BAB79492.1|  136|Homo sapiens ribosomal protein L27 p...   104   6e-23
U25752-1|AAA93226.1|   40|Homo sapiens ribosomal protein L27 pro...    60   1e-09
AB065857-1|BAC06075.1|  315|Homo sapiens seven transmembrane hel...    29   2.0  

>L19527-1|AAA19815.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  104 bits (249), Expect = 6e-23
 Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
 Frame = +2

Query: 2   IHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEER 175
           I KRSKIK FVKV NYNHLMPTRY+VD   +K    KD+ +DPA ++K R   +V+FEER
Sbjct: 62  IAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEER 121

Query: 176 YKSGKNKWFFQKLRF 220
           YK+GKNKWFFQKLRF
Sbjct: 122 YKTGKNKWFFQKLRF 136


>L05094-1|AAC15857.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  104 bits (249), Expect = 6e-23
 Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
 Frame = +2

Query: 2   IHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEER 175
           I KRSKIK FVKV NYNHLMPTRY+VD   +K    KD+ +DPA ++K R   +V+FEER
Sbjct: 62  IAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEER 121

Query: 176 YKSGKNKWFFQKLRF 220
           YK+GKNKWFFQKLRF
Sbjct: 122 YKTGKNKWFFQKLRF 136


>BC098560-1|AAH98560.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  104 bits (249), Expect = 6e-23
 Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
 Frame = +2

Query: 2   IHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEER 175
           I KRSKIK FVKV NYNHLMPTRY+VD   +K    KD+ +DPA ++K R   +V+FEER
Sbjct: 62  IAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEER 121

Query: 176 YKSGKNKWFFQKLRF 220
           YK+GKNKWFFQKLRF
Sbjct: 122 YKTGKNKWFFQKLRF 136


>BC021886-1|AAH21886.1|  140|Homo sapiens RPL27 protein protein.
          Length = 140

 Score =  104 bits (249), Expect = 6e-23
 Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
 Frame = +2

Query: 2   IHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEER 175
           I KRSKIK FVKV NYNHLMPTRY+VD   +K    KD+ +DPA ++K R   +V+FEER
Sbjct: 66  IAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEER 125

Query: 176 YKSGKNKWFFQKLRF 220
           YK+GKNKWFFQKLRF
Sbjct: 126 YKTGKNKWFFQKLRF 140


>BC010026-1|AAH10026.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  104 bits (249), Expect = 6e-23
 Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
 Frame = +2

Query: 2   IHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEER 175
           I KRSKIK FVKV NYNHLMPTRY+VD   +K    KD+ +DPA ++K R   +V+FEER
Sbjct: 62  IAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEER 121

Query: 176 YKSGKNKWFFQKLRF 220
           YK+GKNKWFFQKLRF
Sbjct: 122 YKTGKNKWFFQKLRF 136


>BC007273-1|AAH07273.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  104 bits (249), Expect = 6e-23
 Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
 Frame = +2

Query: 2   IHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEER 175
           I KRSKIK FVKV NYNHLMPTRY+VD   +K    KD+ +DPA ++K R   +V+FEER
Sbjct: 62  IAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEER 121

Query: 176 YKSGKNKWFFQKLRF 220
           YK+GKNKWFFQKLRF
Sbjct: 122 YKTGKNKWFFQKLRF 136


>BC002588-1|AAH02588.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  104 bits (249), Expect = 6e-23
 Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
 Frame = +2

Query: 2   IHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEER 175
           I KRSKIK FVKV NYNHLMPTRY+VD   +K    KD+ +DPA ++K R   +V+FEER
Sbjct: 62  IAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEER 121

Query: 176 YKSGKNKWFFQKLRF 220
           YK+GKNKWFFQKLRF
Sbjct: 122 YKTGKNKWFFQKLRF 136


>BC001700-1|AAH01700.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  104 bits (249), Expect = 6e-23
 Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
 Frame = +2

Query: 2   IHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEER 175
           I KRSKIK FVKV NYNHLMPTRY+VD   +K    KD+ +DPA ++K R   +V+FEER
Sbjct: 62  IAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEER 121

Query: 176 YKSGKNKWFFQKLRF 220
           YK+GKNKWFFQKLRF
Sbjct: 122 YKTGKNKWFFQKLRF 136


>AB061851-1|BAB79492.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  104 bits (249), Expect = 6e-23
 Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
 Frame = +2

Query: 2   IHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEER 175
           I KRSKIK FVKV NYNHLMPTRY+VD   +K    KD+ +DPA ++K R   +V+FEER
Sbjct: 62  IAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEER 121

Query: 176 YKSGKNKWFFQKLRF 220
           YK+GKNKWFFQKLRF
Sbjct: 122 YKTGKNKWFFQKLRF 136


>U25752-1|AAA93226.1|   40|Homo sapiens ribosomal protein L27
           protein.
          Length = 40

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
 Frame = +2

Query: 107 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 220
           KD+ +DPA ++K R   +V+FEERYK+GKNKWFFQKLRF
Sbjct: 2   KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 40


>AB065857-1|BAC06075.1|  315|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 315

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -3

Query: 109 FCAEFFKAEVNCITCWHQVIIVYNLHERLYL 17
           FCA +  A V  IT  H + I + LHE +YL
Sbjct: 34  FCATYAVAVVGNITLLHVIRIDHTLHEPMYL 64


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,953,920
Number of Sequences: 237096
Number of extensions: 469864
Number of successful extensions: 800
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 76,859,062
effective HSP length: 64
effective length of database: 61,684,918
effective search space used: 1357068196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)