Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40606
         (261 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070827-1|AAL48449.1|  135|Drosophila melanogaster AT27980p pro...   119   5e-28
AE014297-3837|AAF56495.1|  135|Drosophila melanogaster CG4759-PA...   119   5e-28
AE013599-1694|AAF58382.1|  506|Drosophila melanogaster CG17050-P...    33   0.073
AE014296-1684|AAZ66069.1|  189|Drosophila melanogaster CG33700-P...    26   6.3  
AL031583-9|CAA20901.1| 1014|Drosophila melanogaster EG:34F3.2 pr...    26   8.3  
AE014298-113|AAF45555.2| 1561|Drosophila melanogaster CG12467-PA...    26   8.3  

>AY070827-1|AAL48449.1|  135|Drosophila melanogaster AT27980p
           protein.
          Length = 135

 Score =  119 bits (287), Expect = 5e-28
 Identities = 54/74 (72%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
 Frame = +2

Query: 2   IHKRSKIKPFVKVVNYNHLMPTRYTV-DFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERY 178
           + K+SK+KPF+K +NYNHLMPTRYT  D SFEK S KDLKDP KRK  RF TRV+FE  Y
Sbjct: 62  LKKKSKVKPFLKSLNYNHLMPTRYTAHDISFEKLSPKDLKDPVKRKTHRFQTRVKFESVY 121

Query: 179 KSGKNKWFFQKLRF 220
           K GKNKWFFQKLRF
Sbjct: 122 KEGKNKWFFQKLRF 135


>AE014297-3837|AAF56495.1|  135|Drosophila melanogaster CG4759-PA
           protein.
          Length = 135

 Score =  119 bits (287), Expect = 5e-28
 Identities = 54/74 (72%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
 Frame = +2

Query: 2   IHKRSKIKPFVKVVNYNHLMPTRYTV-DFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERY 178
           + K+SK+KPF+K +NYNHLMPTRYT  D SFEK S KDLKDP KRK  RF TRV+FE  Y
Sbjct: 62  LKKKSKVKPFLKSLNYNHLMPTRYTAHDISFEKLSPKDLKDPVKRKTHRFQTRVKFESVY 121

Query: 179 KSGKNKWFFQKLRF 220
           K GKNKWFFQKLRF
Sbjct: 122 KEGKNKWFFQKLRF 135


>AE013599-1694|AAF58382.1|  506|Drosophila melanogaster CG17050-PA
           protein.
          Length = 506

 Score = 32.7 bits (71), Expect = 0.073
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +2

Query: 62  PTRYTVDFSFEKFSAKDLKDPAKRKKLRF 148
           P  Y  +F FE+F  KDL+  AK K L+F
Sbjct: 60  PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88


>AE014296-1684|AAZ66069.1|  189|Drosophila melanogaster CG33700-PA
           protein.
          Length = 189

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +2

Query: 23  KPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKD-PAKRKKLRFNTRVRFEERYKS 184
           K F++  N NH  P  + +  +   +   DLKD P          +V F++ Y++
Sbjct: 125 KVFMQASNINHSCPYDHDLIINEFIYKKNDLKDLPIPNGDYMIRVKVAFDKEYRT 179


>AL031583-9|CAA20901.1| 1014|Drosophila melanogaster EG:34F3.2
           protein.
          Length = 1014

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -2

Query: 176 TSLQNVLAC*NAASYVLQGLSGLLR*IFQS*SQLYNVLASSDYSLQPSR 30
           T  + +L C    S ++QG   L R +    + L + +   DYSL+ SR
Sbjct: 690 TDKERLLLCYQTNSQIVQGRFPLSRELALELASLMSQIDMGDYSLEKSR 738


>AE014298-113|AAF45555.2| 1561|Drosophila melanogaster CG12467-PA
            protein.
          Length = 1561

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -2

Query: 176  TSLQNVLAC*NAASYVLQGLSGLLR*IFQS*SQLYNVLASSDYSLQPSR 30
            T  + +L C    S ++QG   L R +    + L + +   DYSL+ SR
Sbjct: 1237 TDKERLLLCYQTNSQIVQGRFPLSRELALELASLMSQIDMGDYSLEKSR 1285


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,502,302
Number of Sequences: 53049
Number of extensions: 144024
Number of successful extensions: 289
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 24,988,368
effective HSP length: 65
effective length of database: 21,540,183
effective search space used: 452343843
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)