Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40604
         (707 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    28   0.33 
AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...    26   1.3  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   4.1  

>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +2

Query: 536 VAIRKLREEFKITPFVKQIDTVAAEW 613
           + + KL++E  + PF+ QI T+A  W
Sbjct: 21  MVLPKLKDETAVMPFLLQIQTIAGLW 46


>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -3

Query: 105 DFNNTVVQTWFKTGCGYSSNR 43
           DFNN VVQ    T  GYS+ R
Sbjct: 110 DFNNIVVQLTNPTAPGYSNRR 130


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
 Frame = +3

Query: 270 KVNENELKEP----TDKRMFVLAAALKNGF 347
           K+ E E  EP      KR FVLA + +NG+
Sbjct: 205 KMEEGEDTEPGVTNASKRSFVLAVSFQNGY 234


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,759
Number of Sequences: 2352
Number of extensions: 15628
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)