Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40600
(722 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B4756 Cluster: PREDICTED: similar to Rab GTPase... 60 7e-08
UniRef50_UPI0000D55581 Cluster: PREDICTED: similar to CG12404-PA... 49 1e-04
UniRef50_Q1HQT3 Cluster: Rab GTPase-interacting factor golgi mem... 49 1e-04
UniRef50_Q5CQG6 Cluster: Yip1p like integral membrane protein; n... 40 0.082
UniRef50_Q9VK46 Cluster: CG12404-PA; n=3; Eumetazoa|Rep: CG12404... 39 0.11
UniRef50_Q54QY3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.77
UniRef50_Q7S6S5 Cluster: Putative uncharacterized protein NCU055... 36 1.0
UniRef50_A6NKD5 Cluster: Uncharacterized protein YIPF7; n=34; Eu... 36 1.3
UniRef50_Q4P3S8 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_Q5KED8 Cluster: Vesicle-mediated transport-related prot... 35 2.3
UniRef50_O94348 Cluster: Protein transport protein yip1; n=1; Sc... 34 3.1
UniRef50_A2EXV6 Cluster: Telomeric DNA binding protein, putative... 34 4.1
UniRef50_UPI0001556432 Cluster: PREDICTED: hypothetical protein;... 33 7.1
UniRef50_Q969M3 Cluster: Protein YIPF5; n=18; Euteleostomi|Rep: ... 33 7.1
UniRef50_UPI000065E8ED Cluster: Homolog of Homo sapiens "ischemi... 33 9.4
UniRef50_Q8SW52 Cluster: Similarity to HYPOTHETICAL INTEGRAL MEM... 33 9.4
>UniRef50_UPI00015B4756 Cluster: PREDICTED: similar to Rab
GTPase-interacting factor golgi membrane protein; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to Rab
GTPase-interacting factor golgi membrane protein -
Nasonia vitripennis
Length = 260
Score = 59.7 bits (138), Expect = 7e-08
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Frame = +3
Query: 249 FLDQTQGTI-PANNNQYYNPN-------FFTPAPIPGEATSXXXXXXXXXXXXXXXXXXX 404
+ DQ G P + +Y NPN +TP + +
Sbjct: 38 YTDQQSGEYAPYSQQEYLNPNQTAYTGELYTPDNYNQGSNTFTDEEDEPPLLEELGIDPD 97
Query: 405 RILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPM 509
RIL+KTLAVLNPFH + + DDAN+LL+D+D+AGP+
Sbjct: 98 RILQKTLAVLNPFHRRGQTDDANYLLQDSDLAGPL 132
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +2
Query: 545 SGNKAHFGFVYGLSMMSVILMYFLLSLMSHTEGVLLFLVLPV 670
+G+KAHFG+VYGL+ S ILMY L SLMS T + + V V
Sbjct: 145 AGSKAHFGYVYGLAFTSCILMYILQSLMSSTGNITIASVASV 186
Score = 42.7 bits (96), Expect = 0.009
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1
Query: 649 TILSVASVLGYCMLPMVVLAGLGI 720
TI SVASVLGYC+LP+V LAGLGI
Sbjct: 179 TIASVASVLGYCILPVVGLAGLGI 202
>UniRef50_UPI0000D55581 Cluster: PREDICTED: similar to CG12404-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG12404-PA - Tribolium castaneum
Length = 251
Score = 49.2 bits (112), Expect = 1e-04
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +2
Query: 545 SGNKAHFGFVYGLSMMSVILMYFLLSLMS 631
SGNKAHFG++YG+S++S ++MY LLSLM+
Sbjct: 136 SGNKAHFGYIYGISVLSCLMMYSLLSLMT 164
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +3
Query: 405 RILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPM 509
RI++K LAVLNPF DDA++L +D D+AGP+
Sbjct: 89 RIVQKMLAVLNPFRSHGLTDDADYLNKDPDLAGPI 123
>UniRef50_Q1HQT3 Cluster: Rab GTPase-interacting factor golgi
membrane protein; n=3; Culicidae|Rep: Rab
GTPase-interacting factor golgi membrane protein - Aedes
aegypti (Yellowfever mosquito)
Length = 271
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/67 (34%), Positives = 33/67 (49%)
Frame = +3
Query: 309 FFTPAPIPGEATSXXXXXXXXXXXXXXXXXXXRILEKTLAVLNPFHGQSKADDANFLLRD 488
F P IPG A RI++K++AVLNPFH Q D+ + ++
Sbjct: 75 FGVPGDIPGAAGVEPSEFDEPPLLDELEIYPQRIMDKSMAVLNPFHKQGLVDNPEYFFKE 134
Query: 489 TDIAGPM 509
TD+AGP+
Sbjct: 135 TDLAGPI 141
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/57 (38%), Positives = 38/57 (66%), Gaps = 10/57 (17%)
Frame = +2
Query: 545 SGNKAHFGFVYGLSMMSVILMYFLLSLM-SHTE---------GVLLFLVLPVYWVIV 685
SG+KA FG++YGL ++SV++MY L++LM + TE +L + +LP+ W+ +
Sbjct: 154 SGSKAQFGYIYGLCIISVVVMYVLITLMCNSTENYVTITAVASILGYSILPIVWLSI 210
>UniRef50_Q5CQG6 Cluster: Yip1p like integral membrane protein; n=2;
Cryptosporidium|Rep: Yip1p like integral membrane
protein - Cryptosporidium parvum Iowa II
Length = 481
Score = 39.5 bits (88), Expect = 0.082
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = +2
Query: 554 KAHFGFVYGLSMMSVILMYFLLSLMSHTEGVLLFLVLPV 670
K HFG++YG+ ++S I Y LL++MS ++ + L+ + +
Sbjct: 369 KIHFGYIYGIGILSCIGTYILLNIMSSSQSIDLYTTMSI 407
>UniRef50_Q9VK46 Cluster: CG12404-PA; n=3; Eumetazoa|Rep: CG12404-PA
- Drosophila melanogaster (Fruit fly)
Length = 264
Score = 39.1 bits (87), Expect = 0.11
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +1
Query: 649 TILSVASVLGYCMLPMVVLAGLGI 720
T +VASVLGYC+LPMVVL+G+ I
Sbjct: 183 TFGAVASVLGYCLLPMVVLSGINI 206
Score = 34.3 bits (75), Expect = 3.1
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 408 ILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPM 509
I +KTLAVLNP G + +L+DTD+AGP+
Sbjct: 109 IFQKTLAVLNPLRGTDQQ-----ILQDTDMAGPL 137
>UniRef50_Q54QY3 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 212
Score = 36.3 bits (80), Expect = 0.77
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +2
Query: 554 KAHFGFVYGLSMMSVILMYFLLSLMSHTEGVLLFLVLPV 670
K FG++YGL ++ + MY +L+LMS +G+ ++ V+ V
Sbjct: 101 KIQFGYIYGLGLIGCVSMYIVLNLMSE-KGIDIYRVISV 138
>UniRef50_Q7S6S5 Cluster: Putative uncharacterized protein
NCU05514.1; n=2; Sordariomycetes|Rep: Putative
uncharacterized protein NCU05514.1 - Neurospora crassa
Length = 338
Score = 35.9 bits (79), Expect = 1.0
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = +2
Query: 554 KAHFGFVYGLSMMSVILMYFLLSLMSHTEGV 646
+ HFG++YGL++ I ++ +LSLM+ + GV
Sbjct: 157 RVHFGYIYGLALFGSISLHVILSLMAPSAGV 187
>UniRef50_A6NKD5 Cluster: Uncharacterized protein YIPF7; n=34;
Eumetazoa|Rep: Uncharacterized protein YIPF7 - Homo
sapiens (Human)
Length = 256
Score = 35.5 bits (78), Expect = 1.3
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +1
Query: 661 VASVLGYCMLPMVVLAG 711
VASVLGYC+LPMV+L+G
Sbjct: 179 VASVLGYCLLPMVILSG 195
>UniRef50_Q4P3S8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 292
Score = 35.1 bits (77), Expect = 1.8
Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Frame = +3
Query: 408 ILEKTLAVLNPFH--GQSKADDANFLLRDTDIAGPM 509
I++KTL VLNP H S A DA+ ++ D D+AGP+
Sbjct: 122 IVDKTLTVLNPLHSYSASHAKDAH-MMDDADLAGPL 156
Score = 33.1 bits (72), Expect = 7.1
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 554 KAHFGFVYGLSMMSVILMYFLLSLMS 631
K+ FG+VYG+++ I +Y LL+LMS
Sbjct: 171 KSQFGYVYGVALFGAISIYTLLNLMS 196
>UniRef50_Q5KED8 Cluster: Vesicle-mediated transport-related
protein, putative; n=1; Filobasidiella neoformans|Rep:
Vesicle-mediated transport-related protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 243
Score = 34.7 bits (76), Expect = 2.3
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 664 ASVLGYCMLPMVVLAGLGI 720
ASVLGYC+LPMV L G+G+
Sbjct: 163 ASVLGYCLLPMVGLGGIGM 181
>UniRef50_O94348 Cluster: Protein transport protein yip1; n=1;
Schizosaccharomyces pombe|Rep: Protein transport protein
yip1 - Schizosaccharomyces pombe (Fission yeast)
Length = 227
Score = 34.3 bits (75), Expect = 3.1
Identities = 17/53 (32%), Positives = 34/53 (64%), Gaps = 7/53 (13%)
Frame = +2
Query: 554 KAHFGFVYGLSMMSVILMYFLLSLMS-------HTEGVLLFLVLPVYWVIVCF 691
++HFG++YG++++ + ++F+L LMS T VL + +LP+ V++ F
Sbjct: 114 RSHFGYIYGIALLGSLSLHFVLRLMSAKNLFFTRTVSVLGYSLLPL--VVIAF 164
>UniRef50_A2EXV6 Cluster: Telomeric DNA binding protein, putative;
n=1; Trichomonas vaginalis G3|Rep: Telomeric DNA binding
protein, putative - Trichomonas vaginalis G3
Length = 167
Score = 33.9 bits (74), Expect = 4.1
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = -2
Query: 319 GVKKFGL*YWLLFAGIVPCV*SRNS--SVDPWEKFENLKSGQLFQKYLMNQK 170
GVKK+G+ +W L + + +N S D +K++N+K+ +QKY+ K
Sbjct: 80 GVKKYGIGHWTLVYELHKDIFMKNERKSSDVGDKWKNMKTKPQYQKYITEDK 131
>UniRef50_UPI0001556432 Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 170
Score = 33.1 bits (72), Expect = 7.1
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +2
Query: 554 KAHFGFVYGLSMMSVILMYFLLSLMS 631
K HFG VYGLS++ + ++ LL+LMS
Sbjct: 59 KVHFGSVYGLSVLGCVGIHTLLNLMS 84
>UniRef50_Q969M3 Cluster: Protein YIPF5; n=18; Euteleostomi|Rep:
Protein YIPF5 - Homo sapiens (Human)
Length = 257
Score = 33.1 bits (72), Expect = 7.1
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 661 VASVLGYCMLPMVVLAGLGI 720
VASVLGYC+LPM++L+ +
Sbjct: 180 VASVLGYCLLPMILLSSFAV 199
>UniRef50_UPI000065E8ED Cluster: Homolog of Homo sapiens
"ischemia/reperfusion inducible protein; n=3;
Euteleostomi|Rep: Homolog of Homo sapiens
"ischemia/reperfusion inducible protein - Takifugu
rubripes
Length = 823
Score = 32.7 bits (71), Expect = 9.4
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +2
Query: 554 KAHFGFVYGLSMMSVILMYFLLSLMSHTEGVLLFLVLPVYWVIVCFL 694
+A +GF G++ + VI + FL+ + ++ VLLFL + V++CFL
Sbjct: 499 EAAYGFTAGITALLVINV-FLMVIAAYRNLVLLFLTAVMEVVLICFL 544
>UniRef50_Q8SW52 Cluster: Similarity to HYPOTHETICAL INTEGRAL
MEMBRANE PROTEIN YIPA_yeast; n=2; Apansporoblastina|Rep:
Similarity to HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN
YIPA_yeast - Encephalitozoon cuniculi
Length = 198
Score = 32.7 bits (71), Expect = 9.4
Identities = 10/25 (40%), Positives = 21/25 (84%)
Frame = +2
Query: 554 KAHFGFVYGLSMMSVILMYFLLSLM 628
K HFG++Y +S+++ + +YFLL+++
Sbjct: 86 KIHFGYIYFISLLTTLSIYFLLNVL 110
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,531,662
Number of Sequences: 1657284
Number of extensions: 13778626
Number of successful extensions: 33384
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 32245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33379
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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