Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40600
(722 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC024737-1|AAH24737.1| 257|Homo sapiens Yip1 domain family, mem... 33 1.0
BC014253-1|AAH14253.1| 257|Homo sapiens Yip1 domain family, mem... 33 1.0
BC007829-1|AAH07829.1| 257|Homo sapiens Yip1 domain family, mem... 33 1.0
AY640934-1|AAV51260.1| 265|Homo sapiens FINGER5-like variant I ... 33 1.0
AY640928-1|AAV51259.1| 257|Homo sapiens FINGER5 variant C protein. 33 1.0
AY640927-1|AAV51258.1| 257|Homo sapiens FINGER5 variant B protein. 33 1.0
AY640926-1|AAV51257.1| 257|Homo sapiens FINGER5 variant A protein. 33 1.0
AY640925-1|AAV51256.1| 257|Homo sapiens FINGER5 protein. 33 1.0
AY358863-1|AAQ89222.1| 257|Homo sapiens SB140 protein. 33 1.0
AK223515-1|BAD97235.1| 257|Homo sapiens golgi membrane protein ... 33 1.0
AK054576-1|BAB70763.1| 257|Homo sapiens protein ( Homo sapiens ... 33 1.0
AF140225-1|AAG48521.1| 257|Homo sapiens unknown protein. 31 3.2
AB014733-1|BAB20270.1| 77|Homo sapiens SMAP-5 protein. 31 3.2
>BC024737-1|AAH24737.1| 257|Homo sapiens Yip1 domain family, member
5 protein.
Length = 257
Score = 33.1 bits (72), Expect = 1.0
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 661 VASVLGYCMLPMVVLAGLGI 720
VASVLGYC+LPM++L+ +
Sbjct: 180 VASVLGYCLLPMILLSSFAV 199
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 554 KAHFGFVYGLSMMSVILMYFLLSLMSHT 637
K FG+VYG+S + + M+ LL+LMS T
Sbjct: 146 KIQFGYVYGISAIGCLGMFCLLNLMSMT 173
>BC014253-1|AAH14253.1| 257|Homo sapiens Yip1 domain family, member
5 protein.
Length = 257
Score = 33.1 bits (72), Expect = 1.0
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 661 VASVLGYCMLPMVVLAGLGI 720
VASVLGYC+LPM++L+ +
Sbjct: 180 VASVLGYCLLPMILLSSFAV 199
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 554 KAHFGFVYGLSMMSVILMYFLLSLMSHT 637
K FG+VYG+S + + M+ LL+LMS T
Sbjct: 146 KIQFGYVYGISAIGCLGMFCLLNLMSMT 173
>BC007829-1|AAH07829.1| 257|Homo sapiens Yip1 domain family, member
5 protein.
Length = 257
Score = 33.1 bits (72), Expect = 1.0
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 661 VASVLGYCMLPMVVLAGLGI 720
VASVLGYC+LPM++L+ +
Sbjct: 180 VASVLGYCLLPMILLSSFAV 199
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 554 KAHFGFVYGLSMMSVILMYFLLSLMSHT 637
K FG+VYG+S + + M+ LL+LMS T
Sbjct: 146 KIQFGYVYGISAIGCLGMFCLLNLMSMT 173
>AY640934-1|AAV51260.1| 265|Homo sapiens FINGER5-like variant I
protein.
Length = 265
Score = 33.1 bits (72), Expect = 1.0
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 661 VASVLGYCMLPMVVLAGLGI 720
VASVLGYC+LPM++L+ +
Sbjct: 180 VASVLGYCLLPMILLSSFAV 199
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 554 KAHFGFVYGLSMMSVILMYFLLSLMSHT 637
K FG+VYG+S + + M+ LL+LMS T
Sbjct: 146 KIQFGYVYGISAIGCLGMFCLLNLMSMT 173
>AY640928-1|AAV51259.1| 257|Homo sapiens FINGER5 variant C protein.
Length = 257
Score = 33.1 bits (72), Expect = 1.0
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 661 VASVLGYCMLPMVVLAGLGI 720
VASVLGYC+LPM++L+ +
Sbjct: 180 VASVLGYCLLPMILLSSFAV 199
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 554 KAHFGFVYGLSMMSVILMYFLLSLMSHT 637
K FG+VYG+S + + M+ LL+LMS T
Sbjct: 146 KIQFGYVYGISAIGCLGMFCLLNLMSMT 173
>AY640927-1|AAV51258.1| 257|Homo sapiens FINGER5 variant B protein.
Length = 257
Score = 33.1 bits (72), Expect = 1.0
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 661 VASVLGYCMLPMVVLAGLGI 720
VASVLGYC+LPM++L+ +
Sbjct: 180 VASVLGYCLLPMILLSSFAV 199
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 554 KAHFGFVYGLSMMSVILMYFLLSLMSHT 637
K FG+VYG+S + + M+ LL+LMS T
Sbjct: 146 KIQFGYVYGISAIGCLGMFCLLNLMSMT 173
>AY640926-1|AAV51257.1| 257|Homo sapiens FINGER5 variant A protein.
Length = 257
Score = 33.1 bits (72), Expect = 1.0
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 661 VASVLGYCMLPMVVLAGLGI 720
VASVLGYC+LPM++L+ +
Sbjct: 180 VASVLGYCLLPMILLSSFAV 199
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 554 KAHFGFVYGLSMMSVILMYFLLSLMSHT 637
K FG+VYG+S + + M+ LL+LMS T
Sbjct: 146 KIQFGYVYGISAIGCLGMFCLLNLMSMT 173
>AY640925-1|AAV51256.1| 257|Homo sapiens FINGER5 protein.
Length = 257
Score = 33.1 bits (72), Expect = 1.0
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 661 VASVLGYCMLPMVVLAGLGI 720
VASVLGYC+LPM++L+ +
Sbjct: 180 VASVLGYCLLPMILLSSFAV 199
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 554 KAHFGFVYGLSMMSVILMYFLLSLMSHT 637
K FG+VYG+S + + M+ LL+LMS T
Sbjct: 146 KIQFGYVYGISAIGCLGMFCLLNLMSMT 173
>AY358863-1|AAQ89222.1| 257|Homo sapiens SB140 protein.
Length = 257
Score = 33.1 bits (72), Expect = 1.0
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 661 VASVLGYCMLPMVVLAGLGI 720
VASVLGYC+LPM++L+ +
Sbjct: 180 VASVLGYCLLPMILLSSFAV 199
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 554 KAHFGFVYGLSMMSVILMYFLLSLMSHT 637
K FG+VYG+S + + M+ LL+LMS T
Sbjct: 146 KIQFGYVYGISAIGCLGMFCLLNLMSMT 173
>AK223515-1|BAD97235.1| 257|Homo sapiens golgi membrane protein
SB140 variant protein.
Length = 257
Score = 33.1 bits (72), Expect = 1.0
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 661 VASVLGYCMLPMVVLAGLGI 720
VASVLGYC+LPM++L+ +
Sbjct: 180 VASVLGYCLLPMILLSSFAV 199
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 554 KAHFGFVYGLSMMSVILMYFLLSLMSHT 637
K FG+VYG+S + + M+ LL+LMS T
Sbjct: 146 KIQFGYVYGISAIGCLGMFCLLNLMSMT 173
>AK054576-1|BAB70763.1| 257|Homo sapiens protein ( Homo sapiens
cDNA FLJ30014 fis, clone 3NB692000330, weakly similar to
YIP1 PROTEIN. ).
Length = 257
Score = 33.1 bits (72), Expect = 1.0
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 661 VASVLGYCMLPMVVLAGLGI 720
VASVLGYC+LPM++L+ +
Sbjct: 180 VASVLGYCLLPMILLSSFAV 199
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 554 KAHFGFVYGLSMMSVILMYFLLSLMSHT 637
K FG+VYG+S + + M+ LL+LMS T
Sbjct: 146 KIQFGYVYGISAIGCLGMFCLLNLMSMT 173
>AF140225-1|AAG48521.1| 257|Homo sapiens unknown protein.
Length = 257
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 7/47 (14%)
Frame = +2
Query: 554 KAHFGFVYGLSMMSVILMYFLLSLMSHT-------EGVLLFLVLPVY 673
K FG+VYG S + + M+ LL+LMS T VL + +LP+Y
Sbjct: 146 KIQFGYVYGSSAIGCLGMFCLLNLMSMTGVSFGCVASVLGYCLLPMY 192
Score = 31.5 bits (68), Expect = 3.2
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 661 VASVLGYCMLPMVVLAGLGI 720
VASVLGYC+LPM +L+ +
Sbjct: 180 VASVLGYCLLPMYLLSSFAV 199
>AB014733-1|BAB20270.1| 77|Homo sapiens SMAP-5 protein.
Length = 77
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +1
Query: 664 ASVLGYCMLPMVVLAGLGI 720
ASVLGYC+LPM++L+ +
Sbjct: 1 ASVLGYCLLPMILLSSFAV 19
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,103,343
Number of Sequences: 237096
Number of extensions: 2132299
Number of successful extensions: 7717
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7717
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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