Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40600
         (722 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094949-1|AAM11302.1|  264|Drosophila melanogaster RH67967p pro...    39   0.006
AE014134-2270|AAF53235.1|  264|Drosophila melanogaster CG12404-P...    39   0.006
AE014298-1977|AAF48333.2| 1103|Drosophila melanogaster CG32611-P...    29   6.4  
AE014296-155|ABC66121.2|  355|Drosophila melanogaster CG34057-PA...    29   8.5  
AE014296-154|ABC66120.1|  344|Drosophila melanogaster CG34057-PB...    29   8.5  

>AY094949-1|AAM11302.1|  264|Drosophila melanogaster RH67967p
           protein.
          Length = 264

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 17/24 (70%), Positives = 21/24 (87%)
 Frame = +1

Query: 649 TILSVASVLGYCMLPMVVLAGLGI 720
           T  +VASVLGYC+LPMVVL+G+ I
Sbjct: 183 TFGAVASVLGYCLLPMVVLSGINI 206



 Score = 34.3 bits (75), Expect = 0.17
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = +3

Query: 408 ILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPM 509
           I +KTLAVLNP  G  +      +L+DTD+AGP+
Sbjct: 109 IFQKTLAVLNPLRGTDQQ-----ILQDTDMAGPL 137



 Score = 30.3 bits (65), Expect = 2.8
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 554 KAHFGFVYGLSMMSVILMYFLLSLM 628
           K  F ++YG+ +M  I  Y LLSLM
Sbjct: 152 KVTFSYIYGIGVMGCIFFYCLLSLM 176


>AE014134-2270|AAF53235.1|  264|Drosophila melanogaster CG12404-PA
           protein.
          Length = 264

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 17/24 (70%), Positives = 21/24 (87%)
 Frame = +1

Query: 649 TILSVASVLGYCMLPMVVLAGLGI 720
           T  +VASVLGYC+LPMVVL+G+ I
Sbjct: 183 TFGAVASVLGYCLLPMVVLSGINI 206



 Score = 34.3 bits (75), Expect = 0.17
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = +3

Query: 408 ILEKTLAVLNPFHGQSKADDANFLLRDTDIAGPM 509
           I +KTLAVLNP  G  +      +L+DTD+AGP+
Sbjct: 109 IFQKTLAVLNPLRGTDQQ-----ILQDTDMAGPL 137



 Score = 30.3 bits (65), Expect = 2.8
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 554 KAHFGFVYGLSMMSVILMYFLLSLM 628
           K  F ++YG+ +M  I  Y LLSLM
Sbjct: 152 KVTFSYIYGIGVMGCIFFYCLLSLM 176


>AE014298-1977|AAF48333.2| 1103|Drosophila melanogaster CG32611-PB
            protein.
          Length = 1103

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = +3

Query: 168  FF*FIKYFWNNCPDFRFSNFSHGSTELFLDQTQGTIPANNNQYYNPN 308
            ++ +  Y++NN  +   +N +H +   +L  T   I   NN  YN N
Sbjct: 1057 YYYYYYYYYNNNNNNNNNNNNHNNNANYLQHTNNNINNTNNFNYNNN 1103


>AE014296-155|ABC66121.2|  355|Drosophila melanogaster CG34057-PA,
           isoform A protein.
          Length = 355

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 241 VDPWEKFENLKSGQLFQKYLMNQKNNSDCRFAFAMHIHW 125
           V+P+  F  + S    + Y  ++ N SDC  A A+  H+
Sbjct: 264 VNPFTVFPTILSNSWLEGYFFHKPNKSDCCAASAISFHY 302


>AE014296-154|ABC66120.1|  344|Drosophila melanogaster CG34057-PB,
           isoform B protein.
          Length = 344

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 241 VDPWEKFENLKSGQLFQKYLMNQKNNSDCRFAFAMHIHW 125
           V+P+  F  + S    + Y  ++ N SDC  A A+  H+
Sbjct: 253 VNPFTVFPTILSNSWLEGYFFHKPNKSDCCAASAISFHY 291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,203,372
Number of Sequences: 53049
Number of extensions: 622909
Number of successful extensions: 1409
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)