Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40599
(766 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0017 + 18937774-18937864,18938505-18940945 145 4e-35
04_01_0103 + 1082077-1082167,1083037-1085477 142 2e-34
01_06_0662 + 30987187-30987277,30987825-30990214 134 6e-32
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 134 6e-32
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 100 1e-21
03_05_0511 + 25056018-25059107 56 4e-08
02_04_0148 - 20198407-20201424 51 1e-06
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 38 0.009
11_06_0301 + 22119619-22120221 34 0.14
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 32 0.44
04_01_0330 - 4369326-4370852 30 2.3
06_03_0555 + 22080522-22080845,22081190-22081290,22081916-22082027 29 3.1
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 29 3.1
10_01_0360 - 3970796-3971248,3972080-3972436 29 4.1
10_01_0104 + 1271635-1271878,1272542-1273134 28 7.1
04_03_1012 - 21711945-21714002 28 7.1
03_05_1048 - 29950860-29951396,29951810-29952676 28 7.1
10_08_0621 + 19328357-19329545,19329967-19329986 28 9.4
07_03_0698 - 20765305-20768526 28 9.4
03_02_0600 - 9748382-9748933,9749805-9749840,9751164-9751218,975... 28 9.4
02_05_0642 + 30576158-30576289,30576436-30576503,30577167-305774... 28 9.4
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 145 bits (351), Expect = 4e-35
Identities = 80/162 (49%), Positives = 100/162 (61%), Gaps = 3/162 (1%)
Frame = +3
Query: 255 KEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLC 434
KEG +AEEN+RG+ F + DV LH DAIHRGGGQ+IPT RR +YA LTA+PRL+EPVYL
Sbjct: 673 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLV 732
Query: 435 EIQCPEVAVGGIYGVLNRRRGHVFES---PRWQVHLCSL*RPTYLSMSRSVLLPICVPTP 605
EIQ PE A+GGIYGVLN++RGHVFE P ++ P S S L T
Sbjct: 733 EIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQLR--AATS 790
Query: 606 ADRPSRSAYSTIGRSSLENPFEPQSKPYNVVQETRKRKGLKE 731
+ + + +P E S+ +VQ+ RKRKGLKE
Sbjct: 791 GQAFPQCVFDHWDMMT-SDPLEAGSQASTLVQDIRKRKGLKE 831
Score = 128 bits (308), Expect = 6e-30
Identities = 54/87 (62%), Positives = 73/87 (83%)
Frame = +1
Query: 1 FMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNIL 180
+M+A+P+ +GL E ID+GR+ PRDD K R++ L+E++ +D A+KIWCFGPE TGPN++
Sbjct: 588 YMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMV 647
Query: 181 VDCSKGVQYLNEIKDSVVAGFQWAARK 261
VD KGVQYLNEIKDSVVAGFQWA+++
Sbjct: 648 VDMCKGVQYLNEIKDSVVAGFQWASKE 674
Score = 86.6 bits (205), Expect = 2e-17
Identities = 38/86 (44%), Positives = 54/86 (62%)
Frame = +2
Query: 503 FRESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGEPVRTSEQ 682
F E Q GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++ +P+ Q
Sbjct: 756 FEEMQRPGTPLYNIKAYLPVIESFGFSSQLRAATSGQAFPQCVFDHWDMMTSDPLEAGSQ 815
Query: 683 ALQRCTGNEKEERIEGRSPDLTQYLD 760
A K + ++ + L+ + D
Sbjct: 816 ASTLVQDIRKRKGLKEQMTPLSDFED 841
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 142 bits (345), Expect = 2e-34
Identities = 79/162 (48%), Positives = 99/162 (61%), Gaps = 3/162 (1%)
Frame = +3
Query: 255 KEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLC 434
KEG +AEEN+RG+ F + DV LH DAIHRGGGQ+IPT RR +YA LTA+PRL+EPVYL
Sbjct: 673 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLV 732
Query: 435 EIQCPEVAVGGIYGVLNRRRGHVFES---PRWQVHLCSL*RPTYLSMSRSVLLPICVPTP 605
EIQ PE A+GGIYGVLN++RGHVFE P ++ P S S L T
Sbjct: 733 EIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQLR--AATS 790
Query: 606 ADRPSRSAYSTIGRSSLENPFEPQSKPYNVVQETRKRKGLKE 731
+ + + +P E S+ +V + RKRKGLKE
Sbjct: 791 GQAFPQCVFDHWDMMT-SDPLEVSSQANQLVLDIRKRKGLKE 831
Score = 128 bits (308), Expect = 6e-30
Identities = 54/87 (62%), Positives = 73/87 (83%)
Frame = +1
Query: 1 FMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNIL 180
+M+A+P+ +GL E ID+GR+ PRDD K R++ L+E++ +D A+KIWCFGPE TGPN++
Sbjct: 588 YMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMV 647
Query: 181 VDCSKGVQYLNEIKDSVVAGFQWAARK 261
VD KGVQYLNEIKDSVVAGFQWA+++
Sbjct: 648 VDMCKGVQYLNEIKDSVVAGFQWASKE 674
Score = 90.2 bits (214), Expect = 2e-18
Identities = 40/86 (46%), Positives = 56/86 (65%)
Frame = +2
Query: 503 FRESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGEPVRTSEQ 682
F E Q GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++ +P+ S Q
Sbjct: 756 FEEMQRPGTPLYNIKAYLPVIESFGFSSQLRAATSGQAFPQCVFDHWDMMTSDPLEVSSQ 815
Query: 683 ALQRCTGNEKEERIEGRSPDLTQYLD 760
A Q K + ++ + L+ + D
Sbjct: 816 ANQLVLDIRKRKGLKEQMTPLSDFED 841
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 134 bits (325), Expect = 6e-32
Identities = 58/87 (66%), Positives = 74/87 (85%)
Frame = +1
Query: 1 FMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNIL 180
+M+A+PM +GLPE IDEGR+ PRDD K R++ L+E++ +D A+KIWCFGPE TGPNI+
Sbjct: 584 YMEARPMEEGLPEAIDEGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNIV 643
Query: 181 VDCSKGVQYLNEIKDSVVAGFQWAARK 261
VD KGVQYLNEIKDSVVAGFQWA+++
Sbjct: 644 VDMCKGVQYLNEIKDSVVAGFQWASKE 670
Score = 131 bits (317), Expect = 5e-31
Identities = 61/87 (70%), Positives = 72/87 (82%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 KEGVMAEENLRG--VRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVY 428
KEG +AEEN+RG + F + DV LH+DAIHRGGGQIIPT RR +YA LTA+PRL+EPVY
Sbjct: 669 KEGALAEENMRGRGICFEVCDVILHSDAIHRGGGQIIPTARRVIYAAQLTAKPRLLEPVY 728
Query: 429 LCEIQCPEVAVGGIYGVLNRRRGHVFE 509
L EIQ PE A+GGIY VLN++RGHVFE
Sbjct: 729 LVEIQAPENALGGIYSVLNQKRGHVFE 755
Score = 77.0 bits (181), Expect = 2e-14
Identities = 34/62 (54%), Positives = 44/62 (70%)
Frame = +2
Query: 503 FRESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGEPVRTSEQ 682
F E Q GTP++ +KAYLPV ESFGFT+ LR+ T GQAFP VFDHW++L +P+ +
Sbjct: 754 FEEMQRPGTPLYNIKAYLPVIESFGFTSTLRAATSGQAFPLFVFDHWEMLSVDPLEPGTR 813
Query: 683 AL 688
L
Sbjct: 814 QL 815
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 134 bits (325), Expect = 6e-32
Identities = 76/163 (46%), Positives = 102/163 (62%), Gaps = 4/163 (2%)
Frame = +3
Query: 255 KEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLC 434
KEG +AEEN+RGV F + DVTLH+D+IHRGGGQ+IPT RR +YA LTA PRLMEP+Y
Sbjct: 683 KEGALAEENMRGVCFELCDVTLHSDSIHRGGGQLIPTARRAMYAAQLTASPRLMEPMYQV 742
Query: 435 EIQCPEVAVGGIYGVLNRRRGH-VFESPRWQVHLCSL*RPTYLSMSRSVLLPICVPTPAD 611
+IQ P+ AVG +YGVLN R G V ES R L +L YL +++S A+
Sbjct: 743 DIQVPKTAVGNVYGVLNSRNGELVEESERTGTPLSNL--RFYLPVAKS--FDFTEKLRAE 798
Query: 612 RPSRSAYSTI---GRSSLENPFEPQSKPYNVVQETRKRKGLKE 731
++ I ++ +PF+ S+ V+ + RKRKGLK+
Sbjct: 799 TSGQAFPQCIFHHWQTMRSDPFQEGSEAAKVITDIRKRKGLKD 841
Score = 103 bits (247), Expect = 2e-22
Identities = 44/73 (60%), Positives = 58/73 (79%)
Frame = +1
Query: 43 IDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIK 222
ID+ R+ P+DD K R + L+E++ +D A+KIW FGPE GPN+LVD KGVQYL+EIK
Sbjct: 612 IDDERIGPKDDIKERGKILSEEFGWDKDLAKKIWAFGPETKGPNLLVDMCKGVQYLSEIK 671
Query: 223 DSVVAGFQWAARK 261
DSVVAGFQWA+++
Sbjct: 672 DSVVAGFQWASKE 684
Score = 75.4 bits (177), Expect = 5e-14
Identities = 34/84 (40%), Positives = 50/84 (59%)
Frame = +2
Query: 509 ESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGEPVRTSEQAL 688
ES+ GTP+ ++ YLPV +SF FT LR+ T GQAFPQC+F HWQ + +P + +A
Sbjct: 768 ESERTGTPLSNLRFYLPVAKSFDFTEKLRAETSGQAFPQCIFHHWQTMRSDPFQEGSEAA 827
Query: 689 QRCTGNEKEERIEGRSPDLTQYLD 760
+ T K + ++ L+ Y D
Sbjct: 828 KVITDIRKRKGLKDIITPLSDYED 851
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 100 bits (240), Expect = 1e-21
Identities = 46/85 (54%), Positives = 58/85 (68%)
Frame = +3
Query: 249 GRKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVY 428
G +EG + +E +R V+F I + + + +HRGGGQIIPT RR +Y+ L A PRLMEPVY
Sbjct: 797 GAREGPLCDEPIRNVKFKILNANIAPEPLHRGGGQIIPTARRVVYSAFLMANPRLMEPVY 856
Query: 429 LCEIQCPEVAVGGIYGVLNRRRGHV 503
EIQ P V IY VL+RRRGHV
Sbjct: 857 YIEIQTPIDCVSAIYTVLSRRRGHV 881
Score = 84.2 bits (199), Expect = 1e-16
Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Frame = +1
Query: 4 MKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILV 183
M A+P+ GL EDI+ G V+ K + ++Y++DV AR IW FGPE GPNIL+
Sbjct: 711 MVAEPLEKGLAEDIENGLVSLDSRQKEITDFFRQRYQWDVLAARSIWAFGPEKQGPNILL 770
Query: 184 DCSKGVQ----YLNEIKDSVVAGFQWAARK 261
D + V+ LN +KDS+V GFQW AR+
Sbjct: 771 DDTLSVEVDKNLLNAVKDSIVQGFQWGARE 800
Score = 73.3 bits (172), Expect = 2e-13
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = +2
Query: 524 GTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGEPV 667
GTP+++VKA+LPV ESFGF DLR +T GQAF VFDHW ++PG+P+
Sbjct: 889 GTPIYVVKAFLPVIESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPL 936
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 55.6 bits (128), Expect = 4e-08
Identities = 25/53 (47%), Positives = 32/53 (60%)
Frame = +2
Query: 506 RESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGEP 664
+E GT +F V AYLPV ES GF+ +LRS T G A V HW+ +P +P
Sbjct: 920 KEEMQEGTSLFTVHAYLPVAESVGFSNELRSVTAGAASALLVLSHWEAIPEDP 972
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +3
Query: 309 DVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNR 488
D H++ + GQ+I + ++ +PRL+E +Y CE+ P +G Y VL+R
Sbjct: 854 DAANHSEQYNIFSGQVITAVKEACREAVVQNKPRLVEAMYFCELTTPTEQLGATYAVLSR 913
Query: 489 RRGHVFE 509
+R V +
Sbjct: 914 KRARVLK 920
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +3
Query: 348 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFE 509
GQII R A +L ++PRL+EP+Y CE+ P +G +Y VL R V +
Sbjct: 843 GQIITAVREACQAAILESKPRLVEPMYFCELTTPTEQLGSMYAVLGNCRARVLK 896
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = +2
Query: 506 RESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGEP 664
+E GT +F V AYL V ES F+ LR+ T G A F HW+ +P +P
Sbjct: 896 KEEMQEGTSLFTVHAYLSVAESSEFSKKLRNATAGAASALLAFSHWETVPQDP 948
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 390 LLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHV 503
L A PRL+EP+ E+ PE +G + G LN RRG V
Sbjct: 644 LRKAGPRLLEPIMKVEVITPEEHLGDVIGDLNSRRGQV 681
>11_06_0301 + 22119619-22120221
Length = 200
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = -2
Query: 690 CRACSEVRTGSPGRTCQWSNTHCGKACPPVLERKSAVKPNDSLTGR*AFTMNIGVPATWD 511
C A E+ G PG ++ N CG+ + AV L AF + P WD
Sbjct: 123 CVALCELAVGGPGAFARYPNPDCGERLDTGAGGERAVSGATCLRCSRAFCLRCEQP--WD 180
Query: 510 SRKRDHDVC 484
R RD + C
Sbjct: 181 ERHRDGEGC 189
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 387 CLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRG 497
C A+P ++EPV E++ P G + G +N+R+G
Sbjct: 665 CYAAARPVILEPVMKVELKVPTEFQGTVTGDMNKRKG 701
>04_01_0330 - 4369326-4370852
Length = 508
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 364 VGMIWPPPLWMASVWSVTS 308
+G IWPPP+W S TS
Sbjct: 487 IGKIWPPPVWFKRCTSATS 505
>06_03_0555 + 22080522-22080845,22081190-22081290,22081916-22082027
Length = 178
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 131 PVRFGALAPRVPAPTSWWIAPKEFSTSMKLRTLLWLDSSGPQGRSYG*REFA 286
P R PR+ PTS + P+E +T+ + W D G RS R+ A
Sbjct: 58 PARLRVARPRIQRPTSSHVEPEEVTTASR-----WRDGRGSVRRSTATRKMA 104
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 396 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFE 509
T +L EP + ++ PE +G + +L +RRG + +
Sbjct: 497 TVDGKLQEPYEIAAVEVPEEYMGSVVELLGKRRGQMVD 534
>10_01_0360 - 3970796-3971248,3972080-3972436
Length = 269
Score = 29.1 bits (62), Expect = 4.1
Identities = 34/117 (29%), Positives = 48/117 (41%), Gaps = 9/117 (7%)
Frame = +3
Query: 351 QIIPTTRR--CLYACLLTAQPRLMEPVYLC--EIQCPEVAVGGIYGVLNRRRGHV--FES 512
Q IP RR + AQ RL +PVY C I + V G+ LN +GH+ E
Sbjct: 80 QQIPAHRRLDAVVTICYEAQARLRDPVYGCVAHIFHLQHQVAGLQSELNYLQGHLSTMEL 139
Query: 513 PRWQVHLCSL*RPTYLSMSRSVLLPICVPTP---ADRPSRSAYSTIGRSSLENPFEP 674
P ++ PT L+P+ +D PS SA + + L F+P
Sbjct: 140 PSPPPYVAG---PTLAPPQPQPLMPMTAAANFNFSDLPSSSAANIPVTADLSTLFDP 193
>10_01_0104 + 1271635-1271878,1272542-1273134
Length = 278
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 506 RESQVAGTPMFIVKA-YLPVNESFGFTADLRSNTGGQAFPQCVFDHWQV 649
RE + T + + KA + P ++ G+T R +TGG + WQV
Sbjct: 129 REGSTSSTLVQMYKADWEPTGDAHGWTQAPRHSTGGSTWQNASESRWQV 177
>04_03_1012 - 21711945-21714002
Length = 685
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 231 CGWIPVGRKEGV-MAEENLRGVRFNIYD 311
C WI +GRK V +A +N+ R I+D
Sbjct: 627 CSWIEIGRKVNVFLARDNIHPCRNEIHD 654
>03_05_1048 - 29950860-29951396,29951810-29952676
Length = 467
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 375 CLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFESP 515
C C+LTA PR+M +L E ++ VG V R + SP
Sbjct: 77 CGRRCVLTANPRMMVEAFLKEYLGADIVVGTELVVWRGRATGLVRSP 123
>10_08_0621 + 19328357-19329545,19329967-19329986
Length = 402
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 118 DVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQW 249
DVT +R+I P G G I + GV +L S+V F+W
Sbjct: 322 DVTGSREIRMM-PFGAGRRICAGLNVGVMHLEYFVGSMVMEFEW 364
>07_03_0698 - 20765305-20768526
Length = 1073
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +3
Query: 282 LRGVRFNIYDVTLHTDAIHRG----GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQ 443
L G + ++ D+ L D +HRG ++ P +L P+L+E +++C I+
Sbjct: 870 LSGTKASLIDLFLQVDKLHRGLLSLSIRMDPPGNWDAIDAILLRPPKLLESLHICSIR 927
>03_02_0600 -
9748382-9748933,9749805-9749840,9751164-9751218,
9751588-9751697,9751955-9752602
Length = 466
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +3
Query: 573 SVLLPICVPTPADRPSRSAYSTIGRSSLENPFEPQSKPYNVVQETRKRKGLKEGLQT*LN 752
S+ CV P+ SRS Y +++ P + +V Q+ RKR + +T +
Sbjct: 237 SITTSACVVVPSISVSRSDYQACQYANIIRPMDKDRVYMSVSQKQRKRSPSRRNEETTAS 296
Query: 753 IW 758
W
Sbjct: 297 GW 298
>02_05_0642 +
30576158-30576289,30576436-30576503,30577167-30577487,
30578318-30579146
Length = 449
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
Frame = -2
Query: 702 PVQRCRACSEVRTGS---PGRTCQ 640
PV+ C+ CSE+ GS P RTC+
Sbjct: 169 PVKGCKHCSEIHVGSVGHPFRTCK 192
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,584,768
Number of Sequences: 37544
Number of extensions: 611085
Number of successful extensions: 1831
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1826
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -