Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40598
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    57   6e-10
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   2.2  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    24   5.1  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         23   6.8  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   6.8  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 56.8 bits (131), Expect = 6e-10
 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = +2

Query: 329 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPN 505
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++L+     
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQT 220

Query: 506 GSGKTLAYILPAIVHI 553
           GSGKT A++LP I H+
Sbjct: 221 GSGKTAAFMLPMIHHL 236



 Score = 29.9 bits (64), Expect = 0.078
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 576 RSDGPIALVLAPTRELAQQIQQVAADFGH 662
           R+  P  +++APTRELA QI      F H
Sbjct: 246 RTRNPYIVIVAPTRELAIQIHDEGRKFAH 274


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
 Frame = -3

Query: 204 ALQRILFSHQSLQILQ------IYCHRCQTETNYRRIC 109
           A +R+  SHQS  IL+      I CHRC+   + +R C
Sbjct: 180 AQKRMEKSHQSESILRVGPEKKITCHRCRKPGHMKRDC 217


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -1

Query: 131 RRIIAEFVASSKFGTTVSTAIIPITRHDYFSDLVEDVYLNY 9
           RR+ A+  A ++F          I+   YF D+V DV L Y
Sbjct: 59  RRVRAKSKAMTEFLPLCDVLFNVISLAGYFCDVVFDVVLGY 99


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 93  WNHRFHGYYSNY 58
           W  R HGYY+NY
Sbjct: 197 WIIRPHGYYANY 208


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 281 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQY 373
           V++R P  V+  +  H+V    V VH P+ +
Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,247
Number of Sequences: 2352
Number of extensions: 14245
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)