Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40597
         (785 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4UEU4 Cluster: Putative uncharacterized protein; n=3; ...    33   6.1  

>UniRef50_Q4UEU4 Cluster: Putative uncharacterized protein; n=3;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria annulata
          Length = 1135

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 8/154 (5%)
 Frame = -2

Query: 598 RFLAWRRMSWRRVATLYDGIYSIQSICSTVTMWRRVFYCFN*K------QTILS*YFILS 437
           RF+ W  + W ++  L    YSI  + + +   R V Y  N           LS YF+L 
Sbjct: 461 RFMEW--LKWIKI-NLKRNYYSIFQVVNAIIATRSVMYSLNSMGIKVQHTDDLSIYFLLR 517

Query: 436 L*HI*-FLSQSVLFCILLLQNNVDVSINQELIKC*MTDE*NTVQMRAHVH-VQIGQCPLL 263
           L      + +  + C+ +  N++D S    +I+         +  R  V  + IG C  L
Sbjct: 518 LDGTYRSICRDYIGCLTISSNHIDFSFITYIIETIHKSLHARIISRIVVKTLLIGVCEYL 577

Query: 262 KVLLIKKSLDISEFMGPYTKNTCFFFLSLFKEII 161
           ++LL     DI     P     C   L LF+E++
Sbjct: 578 EILLKCNVRDIYGINYPRINEMCSEILVLFEELV 611


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,846,576
Number of Sequences: 1657284
Number of extensions: 11853904
Number of successful extensions: 26992
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 25696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26933
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)