Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40593
(797 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 111 1e-23
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 106 6e-22
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 106 7e-22
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 104 2e-21
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 103 5e-21
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 103 5e-21
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 81 2e-14
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 81 2e-14
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 81 3e-14
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 79 2e-13
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 77 4e-13
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 77 5e-13
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 76 9e-13
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 76 1e-12
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 75 2e-12
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 75 3e-12
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 74 4e-12
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 74 5e-12
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 74 5e-12
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 73 6e-12
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 73 6e-12
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 73 8e-12
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 73 8e-12
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 73 1e-11
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 73 1e-11
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 72 1e-11
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 72 2e-11
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 72 2e-11
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 72 2e-11
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 72 2e-11
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 71 3e-11
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 71 4e-11
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 71 4e-11
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 71 4e-11
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 71 4e-11
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 70 6e-11
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 70 6e-11
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 70 6e-11
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 70 8e-11
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 70 8e-11
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 70 8e-11
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 69 1e-10
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 69 1e-10
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 69 1e-10
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 69 1e-10
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 69 2e-10
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 69 2e-10
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 69 2e-10
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 69 2e-10
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 68 2e-10
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 68 2e-10
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 68 2e-10
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 68 3e-10
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 68 3e-10
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 68 3e-10
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 67 4e-10
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 67 4e-10
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 67 4e-10
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 67 6e-10
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 67 6e-10
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 67 6e-10
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 66 7e-10
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 66 7e-10
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 66 7e-10
UniRef50_A5K5I2 Cluster: Putative uncharacterized protein; n=1; ... 66 7e-10
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 66 7e-10
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 66 7e-10
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 66 1e-09
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 66 1e-09
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 66 1e-09
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 66 1e-09
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 66 1e-09
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 66 1e-09
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 66 1e-09
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 66 1e-09
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 65 2e-09
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 65 2e-09
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 65 2e-09
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 65 2e-09
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 65 2e-09
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 65 2e-09
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 65 2e-09
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 65 2e-09
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 65 2e-09
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 65 2e-09
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 65 2e-09
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 65 2e-09
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 65 2e-09
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 65 2e-09
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 65 2e-09
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 65 2e-09
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 65 2e-09
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 65 2e-09
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 64 3e-09
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 64 3e-09
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 64 3e-09
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 64 3e-09
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 64 3e-09
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 64 3e-09
UniRef50_Q7PDQ7 Cluster: Similar ATP-dependent RNA Helicase; n=2... 64 3e-09
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 64 3e-09
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 64 3e-09
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 64 4e-09
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 64 4e-09
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 64 4e-09
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 64 4e-09
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 64 4e-09
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 64 4e-09
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 64 4e-09
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 64 4e-09
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 64 4e-09
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 64 4e-09
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 64 5e-09
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 64 5e-09
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 64 5e-09
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 64 5e-09
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 64 5e-09
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 64 5e-09
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 64 5e-09
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 64 5e-09
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 64 5e-09
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 64 5e-09
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 64 5e-09
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 63 7e-09
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 63 7e-09
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 63 7e-09
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 63 7e-09
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 63 7e-09
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 63 7e-09
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 63 7e-09
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 63 7e-09
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 63 7e-09
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 63 7e-09
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 63 9e-09
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 63 9e-09
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 63 9e-09
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 63 9e-09
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 63 9e-09
UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole geno... 63 9e-09
UniRef50_Q8IBA2 Cluster: Putative uncharacterized protein MAL8P1... 63 9e-09
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 63 9e-09
UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1; ... 63 9e-09
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 63 9e-09
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 63 9e-09
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 63 9e-09
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 63 9e-09
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 62 1e-08
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 62 1e-08
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 62 1e-08
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 62 1e-08
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 62 1e-08
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 62 1e-08
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 62 1e-08
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 62 1e-08
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 62 1e-08
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 62 1e-08
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 62 1e-08
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 62 1e-08
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 62 1e-08
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 62 1e-08
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 62 2e-08
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 62 2e-08
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 62 2e-08
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 2e-08
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 62 2e-08
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 62 2e-08
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 62 2e-08
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 62 2e-08
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 62 2e-08
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 62 2e-08
UniRef50_Q4YV55 Cluster: RNA helicase , putative; n=4; Plasmodiu... 62 2e-08
UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 62 2e-08
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 62 2e-08
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 62 2e-08
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 62 2e-08
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 62 2e-08
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 62 2e-08
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 62 2e-08
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 62 2e-08
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 62 2e-08
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 62 2e-08
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 62 2e-08
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 62 2e-08
UniRef50_UPI00006CEB85 Cluster: DEAD/DEAH box helicase family pr... 61 3e-08
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 61 3e-08
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 61 3e-08
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 61 3e-08
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 61 3e-08
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 61 3e-08
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 61 3e-08
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 61 4e-08
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 61 4e-08
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 61 4e-08
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 61 4e-08
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 61 4e-08
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 61 4e-08
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 61 4e-08
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 61 4e-08
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 61 4e-08
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 60 5e-08
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 60 5e-08
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 60 5e-08
UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1; Ureapl... 60 5e-08
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 60 5e-08
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 60 5e-08
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 60 5e-08
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 60 5e-08
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 60 5e-08
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 60 5e-08
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 60 5e-08
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 60 5e-08
UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4; Mollic... 60 6e-08
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 60 6e-08
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 60 6e-08
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 60 6e-08
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 60 6e-08
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 60 6e-08
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 60 6e-08
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 60 6e-08
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 60 6e-08
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 60 6e-08
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 60 6e-08
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 60 6e-08
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 60 6e-08
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 60 8e-08
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 60 8e-08
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 60 8e-08
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 60 8e-08
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 60 8e-08
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 60 8e-08
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 60 8e-08
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 60 8e-08
UniRef50_Q7R850 Cluster: ATP-dependent RNA helicase; n=1; Plasmo... 60 8e-08
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 60 8e-08
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 60 8e-08
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 60 8e-08
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 60 8e-08
UniRef50_A7ECJ8 Cluster: Putative uncharacterized protein; n=1; ... 60 8e-08
UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;... 60 8e-08
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 60 8e-08
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 60 8e-08
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 60 8e-08
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 60 8e-08
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 60 8e-08
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 59 1e-07
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 59 1e-07
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 59 1e-07
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 59 1e-07
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 59 1e-07
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 59 1e-07
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 59 1e-07
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 59 1e-07
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 59 1e-07
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 59 1e-07
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 59 1e-07
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 59 1e-07
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 59 1e-07
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 59 1e-07
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 59 1e-07
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 59 1e-07
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 59 1e-07
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 59 1e-07
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 59 1e-07
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 59 1e-07
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 59 1e-07
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 59 1e-07
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 59 1e-07
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 58 2e-07
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 58 2e-07
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 58 2e-07
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 58 2e-07
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 58 2e-07
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 58 2e-07
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 58 2e-07
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 58 2e-07
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 58 2e-07
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 58 2e-07
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 58 2e-07
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 58 2e-07
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 58 2e-07
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 58 2e-07
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 58 2e-07
UniRef50_Q92499 Cluster: ATP-dependent RNA helicase DDX1; n=56; ... 58 2e-07
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 58 2e-07
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 58 2e-07
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 58 3e-07
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 58 3e-07
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 58 3e-07
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 58 3e-07
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 58 3e-07
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 58 3e-07
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 58 3e-07
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 58 3e-07
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 58 3e-07
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 58 3e-07
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 58 3e-07
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 58 3e-07
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_O74764 Cluster: ATP-dependent rRNA helicase spb4; n=1; ... 58 3e-07
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 58 3e-07
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 58 3e-07
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 58 3e-07
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 58 3e-07
UniRef50_UPI0000E49D13 Cluster: PREDICTED: similar to DEAD (Asp-... 57 4e-07
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 57 4e-07
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 57 4e-07
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 57 4e-07
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 57 4e-07
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 57 4e-07
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 57 4e-07
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 57 4e-07
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 57 4e-07
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 57 4e-07
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 57 4e-07
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 57 4e-07
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 57 4e-07
UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 57 4e-07
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 57 6e-07
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 57 6e-07
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 57 6e-07
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 57 6e-07
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 57 6e-07
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 57 6e-07
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 57 6e-07
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 57 6e-07
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 57 6e-07
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 57 6e-07
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 57 6e-07
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 57 6e-07
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 57 6e-07
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 57 6e-07
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 57 6e-07
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 56 8e-07
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 56 8e-07
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 56 8e-07
UniRef50_A1WB42 Cluster: DEAD/DEAH box helicase domain protein; ... 56 8e-07
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 56 8e-07
UniRef50_Q7PMT7 Cluster: ENSANGP00000010668; n=1; Anopheles gamb... 56 8e-07
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 56 8e-07
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 56 8e-07
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 56 8e-07
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 56 8e-07
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 56 8e-07
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 56 1e-06
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 56 1e-06
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 56 1e-06
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 56 1e-06
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 56 1e-06
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 56 1e-06
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 56 1e-06
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 56 1e-06
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 56 1e-06
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 56 1e-06
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 56 1e-06
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 56 1e-06
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 56 1e-06
UniRef50_A2FYU9 Cluster: DEAD/DEAH box helicase family protein; ... 56 1e-06
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 56 1e-06
UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein; ... 56 1e-06
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 56 1e-06
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 56 1e-06
UniRef50_Q873H9 Cluster: ATP-dependent rRNA helicase spb-4; n=14... 56 1e-06
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 56 1e-06
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 56 1e-06
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 56 1e-06
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 56 1e-06
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 56 1e-06
UniRef50_Q2J919 Cluster: Helicase-like; n=3; Frankia|Rep: Helica... 56 1e-06
UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 56 1e-06
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 56 1e-06
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 56 1e-06
UniRef50_Q03AA2 Cluster: Superfamily II DNA and RNA helicase; n=... 56 1e-06
UniRef50_A6G2A2 Cluster: DEAD/DEAH box helicase-like protein; n=... 56 1e-06
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 56 1e-06
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 56 1e-06
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 56 1e-06
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 56 1e-06
UniRef50_A5B712 Cluster: Putative uncharacterized protein; n=1; ... 56 1e-06
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 56 1e-06
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 56 1e-06
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 56 1e-06
UniRef50_Q54DN9 Cluster: Putative uncharacterized protein; n=1; ... 56 1e-06
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 56 1e-06
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 56 1e-06
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 56 1e-06
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 56 1e-06
UniRef50_A2XVF7 Cluster: DEAD-box ATP-dependent RNA helicase 13;... 56 1e-06
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 56 1e-06
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 55 2e-06
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 55 2e-06
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 55 2e-06
UniRef50_Q5CXB0 Cluster: CG6539/Dhh1-like SF II RNA helicase; n=... 55 2e-06
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 55 2e-06
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 55 2e-06
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 55 2e-06
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 55 2e-06
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 55 2e-06
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 55 2e-06
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 55 2e-06
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 55 2e-06
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 55 2e-06
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 55 2e-06
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 55 2e-06
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 55 2e-06
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 55 2e-06
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 55 2e-06
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 55 2e-06
UniRef50_A4RUB4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 55 2e-06
UniRef50_Q55CP6 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 55 2e-06
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 55 2e-06
UniRef50_A7AU89 Cluster: DEAD/DEAH box helicase family protein; ... 55 2e-06
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 55 2e-06
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 55 2e-06
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 54 3e-06
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 54 3e-06
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 54 3e-06
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 54 3e-06
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 54 3e-06
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 54 3e-06
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 54 3e-06
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 54 3e-06
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 54 3e-06
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 54 3e-06
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 54 3e-06
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 54 3e-06
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 54 3e-06
UniRef50_A7ARY5 Cluster: DEAD/DEAH box helicase protein family; ... 54 3e-06
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 54 3e-06
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 54 3e-06
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 54 3e-06
UniRef50_Q9FLB0 Cluster: DEAD-box ATP-dependent RNA helicase 18;... 54 3e-06
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 54 3e-06
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 54 3e-06
UniRef50_A3LWH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 54 3e-06
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 54 3e-06
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 54 4e-06
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 54 4e-06
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 54 4e-06
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 54 4e-06
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 54 4e-06
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 54 4e-06
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 54 4e-06
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 54 4e-06
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 54 4e-06
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 54 4e-06
UniRef50_Q00GM9 Cluster: Plastid RNA helicase VDL protein; n=1; ... 54 4e-06
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 54 4e-06
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 54 4e-06
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 54 4e-06
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 54 4e-06
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 54 4e-06
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 54 4e-06
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=... 54 4e-06
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 54 4e-06
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 54 4e-06
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 54 4e-06
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 54 4e-06
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 54 5e-06
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 54 5e-06
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 54 5e-06
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 54 5e-06
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 54 5e-06
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 54 5e-06
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 54 5e-06
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 54 5e-06
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 54 5e-06
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 54 5e-06
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 54 5e-06
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 54 5e-06
UniRef50_Q4Q552 Cluster: ATP-dependent RNA helicase, putative; n... 54 5e-06
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 54 5e-06
UniRef50_Q22LR2 Cluster: Type III restriction enzyme, res subuni... 54 5e-06
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 54 5e-06
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 54 5e-06
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 54 5e-06
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 54 5e-06
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 54 5e-06
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 53 7e-06
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 53 7e-06
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 53 7e-06
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 53 7e-06
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 53 7e-06
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 53 7e-06
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 53 7e-06
UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n... 53 7e-06
UniRef50_Q4N559 Cluster: ATP-dependent RNA helicase, putative; n... 53 7e-06
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 53 7e-06
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 53 7e-06
UniRef50_Q84TG1 Cluster: DEAD-box ATP-dependent RNA helicase 57;... 53 7e-06
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 53 7e-06
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 53 7e-06
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 111 bits (268), Expect = 1e-23
Identities = 53/86 (61%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVM 429
+GL SGF+KPSPIQ +PLG+CGFDL++++KSGTGKT+VFS IALE +N + LQV+
Sbjct: 37 QGLSVSGFKKPSPIQFKAIPLGRCGFDLIVKSKSGTGKTLVFSTIALETVNTAKDHLQVL 96
Query: 430 ILTPTREIAAQICDVIKQIGSHHKGL 507
IL PTREIA QI DV++ +G H GL
Sbjct: 97 ILVPTREIAVQIEDVLRSVGCHVNGL 122
Score = 87.0 bits (206), Expect = 5e-16
Identities = 42/88 (47%), Positives = 62/88 (70%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G +E +GG + +D+ K K HI VG+PGR+KHL+ + + V+LFVLDE DKL+
Sbjct: 121 GLKIESFIGGRPLEDDLKK-SSKCHIAVGAPGRVKHLLKMGALTTNLVKLFVLDEADKLM 179
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATF 764
E+ F +DIN I+++LP KQ+I+SSAT+
Sbjct: 180 EESFQSDINEIYNSLPPRKQMIVSSATY 207
Score = 33.1 bits (72), Expect = 8.3
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +2
Query: 155 SLAHDIRNSTRTRDVQIVENVTFTSMLLSE 244
++AHD+ RT+DV + EN++F S+LL +
Sbjct: 4 TIAHDLDAKERTKDVILDENISFASLLLPD 33
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 106 bits (255), Expect = 6e-22
Identities = 51/85 (60%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMI 432
GL++ GF KPSPIQ +PLG+CGFDL++ AKSGTGKT VF IIALE +++ + +QV+I
Sbjct: 38 GLLNCGFHKPSPIQHKSIPLGRCGFDLIVRAKSGTGKTAVFGIIALEMIDIKISSVQVII 97
Query: 433 LTPTREIAAQICDVIKQIGSHHKGL 507
L PTREIA QI +VI +G KGL
Sbjct: 98 LAPTREIAIQIKEVIASLGCEIKGL 122
Score = 90.2 bits (214), Expect = 5e-17
Identities = 43/89 (48%), Positives = 63/89 (70%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
+G VE +GG++++ D K HI +G+PGR+KHLI ++ + V+LFVLDE DKL
Sbjct: 120 KGLKVESFIGGVAMDIDRKKLSN-CHIAIGAPGRVKHLIDKGYLKMDHVRLFVLDEADKL 178
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSATF 764
+E+ F DINYI++ LP ++QVI SSAT+
Sbjct: 179 MEESFQKDINYIYAKLPPNRQVISSSATY 207
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 106 bits (254), Expect = 7e-22
Identities = 52/85 (61%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNG-LQVMI 432
GL +SGFQ+PSPIQL +PLG+CG DL+++AKSGTGKT VF+ IAL+ L L N QV++
Sbjct: 40 GLSASGFQRPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFTTIALDSLILENATTQVLV 99
Query: 433 LTPTREIAAQICDVIKQIGSHHKGL 507
L PTREIA QI V+ IGS +GL
Sbjct: 100 LAPTREIAVQIHAVVMAIGSAMEGL 124
Score = 78.6 bits (185), Expect = 2e-13
Identities = 40/104 (38%), Positives = 65/104 (62%), Gaps = 4/104 (3%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
+G + V +GG +++D + KK HI +GSPGR+K LI + +S ++LFVLDE DKL
Sbjct: 122 EGLECHVFIGGRPISQD-KQHLKKCHIAIGSPGRIKQLIEMGALMVSSIRLFVLDEADKL 180
Query: 678 VE----KPFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
+E F IN+I+S+LP +KQ++ SAT+ + + ++
Sbjct: 181 LEDDSSSSFQEQINWIYSSLPANKQMLALSATYPESLAQQLSRY 224
Score = 33.9 bits (74), Expect = 4.8
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 146 AVMSLAHDIRNSTRTRDVQIVENVTFTSMLLSEFTLE 256
A + AH++++ TRT DV I V F+S+LLS+ LE
Sbjct: 3 ASVKAAHELQSRTRTDDVLISGGVEFSSLLLSKPVLE 39
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 104 bits (250), Expect = 2e-21
Identities = 49/85 (57%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMI 432
GL GFQ+PSPIQL +PLG+CGFDL++ AKSGTGKT+VF II+LE ++++ + +QV+I
Sbjct: 10 GLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLVFCIISLEMIDIDISSVQVLI 69
Query: 433 LTPTREIAAQICDVIKQIGSHHKGL 507
L PTREIA QI V +G K L
Sbjct: 70 LAPTREIAVQIAQVFSSVGCEIKDL 94
Score = 90.6 bits (215), Expect = 4e-17
Identities = 46/85 (54%), Positives = 58/85 (68%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKP 689
VEV +GGL++ D K I VG+PGR++HLI + + +V+LFVLDE DKL+E
Sbjct: 96 VEVFIGGLAIENDKKKVNN-CQIAVGAPGRIRHLIDKGFLKVENVRLFVLDEADKLMETS 154
Query: 690 FLNDINYIFSALPNHKQVIMSSATF 764
F DINYIFS LP KQVI SSAT+
Sbjct: 155 FQKDINYIFSKLPLSKQVIASSATY 179
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 103 bits (247), Expect = 5e-21
Identities = 50/85 (58%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMI 432
GL ++GF++PSP+QL +PLG+CG DL+++AKSGTGKT VFS IAL+ L L N Q++I
Sbjct: 77 GLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLILENYSTQILI 136
Query: 433 LTPTREIAAQICDVIKQIGSHHKGL 507
L PTREIA QI VI IG +GL
Sbjct: 137 LAPTREIAVQIHSVITAIGIKMEGL 161
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/104 (39%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Frame = +3
Query: 489 ITPQGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDEC 668
I +G + V +GG +++D + KK HI VGSPGR+K LI +++N ++LF+LDE
Sbjct: 156 IKMEGLECHVFIGGTPLSQDKTRLKK-CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEA 214
Query: 669 DKLVEK-PFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
DKL+E+ F IN+I+S+LP KQ++ SAT+ + ++ ++
Sbjct: 215 DKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEVLANALTRY 258
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 103 bits (247), Expect = 5e-21
Identities = 50/85 (58%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMI 432
GL ++GF++PSP+QL +PLG+CG DL+++AKSGTGKT VFS IAL+ L L N Q++I
Sbjct: 76 GLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLENLSTQILI 135
Query: 433 LTPTREIAAQICDVIKQIGSHHKGL 507
L PTREIA QI VI IG +GL
Sbjct: 136 LAPTREIAVQIHSVITAIGIKMEGL 160
Score = 85.0 bits (201), Expect = 2e-15
Identities = 42/104 (40%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Frame = +3
Query: 489 ITPQGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDEC 668
I +G + V +GG +++D + KK HI VGSPGR+K LI +++N ++LF+LDE
Sbjct: 155 IKMEGLECHVFIGGTPLSQDKTRLKK-CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEA 213
Query: 669 DKLVEK-PFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
DKL+E+ F IN+I+S+LP KQ++ SAT+ ++ K+
Sbjct: 214 DKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKY 257
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 81.4 bits (192), Expect = 2e-14
Identities = 41/80 (51%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGL-QVM 429
RGL + F PSPIQ +PL K G DLL++AKSGTGKT+VF+++ E N + Q +
Sbjct: 35 RGLTRNNFTHPSPIQARAIPLAKLGLDLLVQAKSGTGKTLVFTVLITENHNPDVMFPQSL 94
Query: 430 ILTPTREIAAQICDVIKQIG 489
+ PTREIA QI DV+ +IG
Sbjct: 95 TVVPTREIAVQIEDVLNRIG 114
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/92 (34%), Positives = 54/92 (58%)
Frame = +3
Query: 522 MGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLND 701
+GGL +++D K + VVG+PGR+ HLI N +N S +++ VLDE D L+ +
Sbjct: 126 IGGLDISQD-RKNLQSCSAVVGTPGRINHLIKSNVLNTSQIKILVLDEADSLITGSLKPE 184
Query: 702 INYIFSALPNHKQVIMSSATFQNIARKSICKF 797
++ I LP +Q ++ SAT+ N + + K+
Sbjct: 185 VDQIVKMLPTKRQTVVCSATYYNNRDRELLKY 216
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/77 (46%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNG-LQVMIL 435
L +S F +PSP+Q +P+G G D+L++AKSGTGKT+VFS++A+E L+ + +Q +I+
Sbjct: 37 LKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIV 96
Query: 436 TPTREIAAQICDVIKQI 486
TPTREI+ QI + ++++
Sbjct: 97 TPTREISVQIKETVRKV 113
Score = 74.1 bits (174), Expect = 4e-12
Identities = 36/94 (38%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Frame = +3
Query: 486 RITPQGSDVEVVMGGLSVNEDIAKFKK-KVHIVVGSPGRLKHLIVGNHINLSDVQLFVLD 662
++ P G+ V +GG + ++ K+ + IV+G+PGR+ L+ +N+S V FVLD
Sbjct: 112 KVAPTGARTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLD 171
Query: 663 ECDKLVEKPFLNDINYIFSALPNHKQVIMSSATF 764
E DKL+++ F +DIN I ++LP +QV + SAT+
Sbjct: 172 EADKLMDEVFRDDINIIINSLPQIRQVAVFSATY 205
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 81.0 bits (191), Expect = 3e-14
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Frame = +1
Query: 187 DS*CSNSGKCYVHFHASFRIYTRGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGK 366
D + G + F+ R G+ +GF+KPSPIQ +P+ G D+L AK+GTGK
Sbjct: 38 DDVLNTKGNTFEDFYLK-RELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGK 96
Query: 367 TVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSH 495
T F I LEK+ N +Q +I+ PTRE+A Q V++ +G H
Sbjct: 97 TAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKH 140
Score = 70.5 bits (165), Expect = 4e-11
Identities = 36/98 (36%), Positives = 55/98 (56%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G V GG ++ +DI + + VHI+VG+PGR+ L +LSD LF++DE DK++
Sbjct: 142 GISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKML 201
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATFQNIARKSICK 794
+ F I I S LP Q ++ SATF ++ + K
Sbjct: 202 SRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVK 239
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMI 432
G+ ++GF++PSPIQ +P+ G D+L AK+GTGKT F I L ++N + + +Q +I
Sbjct: 50 GIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALI 109
Query: 433 LTPTREIAAQICDVIKQIGSH 495
L PTRE+A Q V K +G+H
Sbjct: 110 LVPTRELALQTSQVCKTLGAH 130
Score = 65.3 bits (152), Expect = 2e-09
Identities = 31/85 (36%), Positives = 52/85 (61%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKP 689
V + GG ++ +DI + ++ VHI+VG+PGR+ L +L+ +FV+DE DKL+ +
Sbjct: 136 VMITTGGTTLRDDILRLQQPVHILVGTPGRILDLGSKGIASLNKCGVFVMDEADKLLSED 195
Query: 690 FLNDINYIFSALPNHKQVIMSSATF 764
F+ I + P +QV++ SATF
Sbjct: 196 FMPVIEQTLALCPQERQVMLFSATF 220
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 77.4 bits (182), Expect = 4e-13
Identities = 34/83 (40%), Positives = 54/83 (65%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMI 432
+ +I GF++PSPIQ +P G D++ +A++GTGKT F I +EK++ +Q +I
Sbjct: 19 KAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVEKVSTGRHVQALI 78
Query: 433 LTPTREIAAQICDVIKQIGSHHK 501
LTPTRE+A Q+ I+++ H K
Sbjct: 79 LTPTRELAIQVSGEIQKLSKHKK 101
Score = 57.2 bits (132), Expect = 4e-07
Identities = 28/93 (30%), Positives = 50/93 (53%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
+ GG S+ I K+ V +V+G+PGR+ + + L V +LDE D++++ F++
Sbjct: 107 IYGGQSIVHQIKALKQGVQVVIGTPGRIIDHLRRKTLILDHVNTVILDEADEMLDMGFID 166
Query: 699 DINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
DI I + N +Q ++ SAT +K K+
Sbjct: 167 DIESILRQVKNERQTLLFSATMPPAIKKLSRKY 199
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 77.0 bits (181), Expect = 5e-13
Identities = 34/79 (43%), Positives = 53/79 (67%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMI 432
+G+ +GF PSP+Q +P+ G DL+ +A++GTGKT F+I L LN N ++ +I
Sbjct: 58 KGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAIPILNTLNRNKDIEALI 117
Query: 433 LTPTREIAAQICDVIKQIG 489
+TPTRE+A QI + I ++G
Sbjct: 118 ITPTRELAMQISEEILKLG 136
Score = 57.2 bits (132), Expect = 4e-07
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = +3
Query: 525 GGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLNDI 704
GG S+ +KK ++ +PGRL + I Q+ VLDE D++++ FL+DI
Sbjct: 148 GGQSIKRQCDLLEKKPKAMIATPGRLLDHLQNGRIAHFSPQIVVLDESDEMLDMGFLDDI 207
Query: 705 NYIFSALPNHKQVIMSSAT 761
IF LPN +Q ++ SAT
Sbjct: 208 EEIFKFLPNTRQTLLFSAT 226
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 76.2 bits (179), Expect = 9e-13
Identities = 42/98 (42%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKV-HIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEK 686
V V GGLS+ +D KK HIVVG+PGR+ L +NL ++ F+LDECDK++E+
Sbjct: 145 VAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQ 204
Query: 687 -PFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
D+ IF P+ KQV+M SAT R KF
Sbjct: 205 LDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKF 242
Score = 59.3 bits (137), Expect = 1e-07
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 8/91 (8%)
Frame = +1
Query: 217 YVHFHAS-FRIYT------RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVV 375
YV H+S FR + R ++ GF+ PS +Q +P G D+L +AKSG GKT V
Sbjct: 39 YVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAV 98
Query: 376 FSIIALEKLNLNNG-LQVMILTPTREIAAQI 465
F + L++L G + V+++ TRE+A QI
Sbjct: 99 FVLATLQQLEPVTGQVSVLVMCHTRELAFQI 129
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 75.8 bits (178), Expect = 1e-12
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Frame = +1
Query: 250 TRGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL-NNGLQV 426
TR L ++GF PSP+QL VPLG+ G D++ +AKSGTGKT+ F +IALE+++ Q
Sbjct: 49 TRALRAAGFDAPSPVQLACVPLGRFGCDVIAQAKSGTGKTMTFVVIALERVDAGRRRTQA 108
Query: 427 MILTPTREIAAQ 462
+ L PTRE A Q
Sbjct: 109 LALAPTRECAVQ 120
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/88 (36%), Positives = 51/88 (57%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G + +++GGL V ED A+ + H+VVG+PGR + ++ + +L +LDE D L+
Sbjct: 142 GIETCLLVGGLPVKEDRARLASQPHVVVGTPGRTRQMLEEGSMACDGARLLILDEADALL 201
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATF 764
F D+ + +S LP KQV SAT+
Sbjct: 202 SGTFERDVLFAYSMLPERKQVCAFSATY 229
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/100 (38%), Positives = 58/100 (58%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
+G V +GG D K KK HI VG+PGR+K LI + ++LFVLDE DKL
Sbjct: 62 EGLRSHVFIGGTLFGPDRQKLKK-CHIAVGTPGRIKQLIEYEVLKTGTIRLFVLDEADKL 120
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
++ F +N+I++ L ++KQ++ SAT+ K + K+
Sbjct: 121 LDDTFQEQVNWIYNHLSDNKQMLALSATYPEYLAKHLTKY 160
Score = 74.1 bits (174), Expect = 4e-12
Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +1
Query: 331 DLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGL 507
DL+++AKSGTGKT VFS+IALE ++L N QV+IL PTREIA QI D I+ IG +GL
Sbjct: 5 DLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEMEGL 64
Query: 508 MS 513
S
Sbjct: 65 RS 66
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 74.5 bits (175), Expect = 3e-12
Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKV-HIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEK 686
V V GGLS+ +D KK H+VVG+PGR+ L+ +L +V+ FVLDECDK++E+
Sbjct: 144 VSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQ 203
Query: 687 -PFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
D+ IF P+ KQ +M SAT R KF
Sbjct: 204 LDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKF 241
Score = 60.5 bits (140), Expect = 5e-08
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 8/91 (8%)
Frame = +1
Query: 217 YVHFHAS-FRIYT------RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVV 375
YV H+S FR + R ++ GF+ PS +Q +P G D+L +AKSG GKT V
Sbjct: 38 YVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAV 97
Query: 376 FSIIALEKLNLNNG-LQVMILTPTREIAAQI 465
F + L+++ NG + V+++ TRE+A QI
Sbjct: 98 FVLATLQQIEPVNGQVTVLVMCHTRELAFQI 128
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 74.1 bits (174), Expect = 4e-12
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Frame = +3
Query: 513 EVVMGGLSVNEDIAKFKKK--VHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEK 686
EVV GG+S+N+ I FK+ HI++G+PGR+ LI ++ +Q FVLDECDK +EK
Sbjct: 176 EVVYGGISMNKHIKLFKEDNIPHIIIGTPGRILALIREKYLITDKIQHFVLDECDKCLEK 235
Query: 687 -PFLNDINYIFSALPNHKQVIMSSATFQNIARKSICK 794
+D+ IF + P KQV+ SAT R +CK
Sbjct: 236 LDMRSDVQKIFISTPLKKQVMFFSATMAKEMR-DVCK 271
Score = 50.8 bits (116), Expect = 4e-05
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN 411
R + SGF+ PS +Q +P G D+L +AKSG GKT VF + L++L+ N
Sbjct: 68 RAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQLDTN 120
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 73.7 bits (173), Expect = 5e-12
Identities = 31/72 (43%), Positives = 48/72 (66%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILTPTRE 450
GF+KP+PIQ+ +P+ G DL+ +A++GTGKT F I L ++ GLQ ++L PTRE
Sbjct: 23 GFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNRVIKGEGLQALVLCPTRE 82
Query: 451 IAAQICDVIKQI 486
+A Q+ + I +
Sbjct: 83 LAVQVTEEISSL 94
Score = 62.5 bits (145), Expect = 1e-08
Identities = 33/96 (34%), Positives = 52/96 (54%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKP 689
V + GG S+ + ++ I+VG+PGRL + I+LS ++ VLDE D++++
Sbjct: 102 VLAIYGGQSIELQLRSLRRNPEIIVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMG 161
Query: 690 FLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
FL DI I S P +Q + SAT + R+ KF
Sbjct: 162 FLPDIQKILSQCPRERQTFLFSATLPDEVRELGTKF 197
>UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG13685;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG13685 - Caenorhabditis
briggsae
Length = 935
Score = 73.7 bits (173), Expect = 5e-12
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Frame = +3
Query: 486 RITPQGSDVEVVMGGLSVNEDIAKFKK-KVHIVVGSPGRLKHLIVGNHINLSDVQLFVLD 662
++TP G+ V GG+ ++ KK + IV+G+PGR+ LI +++S V FVLD
Sbjct: 104 KLTPAGARTSVYTGGIGHKLNVIDLKKTRPQIVIGTPGRVAQLIRMGAMDISHVDFFVLD 163
Query: 663 ECDKLVEKPFLNDINYIFSALPNHKQVIMSSATF 764
E DKL+++ F DIN I ++LP +QV + SAT+
Sbjct: 164 EADKLMDEVFKPDINTIINSLPPIRQVAVFSATY 197
Score = 71.3 bits (167), Expect = 3e-11
Identities = 32/71 (45%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = +1
Query: 277 QKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTREI 453
+K +Q +P+G G D+L++AKSGTGKT+VFS++A+E L+L + +Q +I+TPTREI
Sbjct: 35 EKLKSVQAKAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDLKAHYIQKVIITPTREI 94
Query: 454 AAQICDVIKQI 486
+ QI + ++++
Sbjct: 95 STQIKETVRKL 105
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 73.3 bits (172), Expect = 6e-12
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL-NNGLQVMI 432
G+ G++KPSPIQ +P+ G D+L AK+GTGK+ + I LE+++L + +Q ++
Sbjct: 103 GIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPMLERIDLKKDHIQALV 162
Query: 433 LTPTREIAAQICDVIKQIGSHHKGL 507
L PTRE+A Q+ + QI H G+
Sbjct: 163 LVPTRELALQVSQISIQIAKHLGGV 187
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G V GG ++ +DI + + VH+V+ +PGR+ L+ + VQ+ V+DE K
Sbjct: 186 GVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLMKKGVAKVDKVQIMVMDEVGKRT 245
Query: 681 EKPFL 695
K L
Sbjct: 246 PKAAL 250
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 73.3 bits (172), Expect = 6e-12
Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVM 429
RG+ S GF++PS IQ + G D+L +A+SGTGKT F+I AL++++ N QV+
Sbjct: 69 RGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQSGTGKTGTFTIGALQRIDPNQRKTQVI 128
Query: 430 ILTPTREIAAQICDVIKQIGSH 495
IL P RE+A QI DV+K IG +
Sbjct: 129 ILAPVRELAKQIYDVVKGIGQY 150
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/81 (32%), Positives = 50/81 (61%)
Frame = +3
Query: 522 MGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLND 701
+GG S E K K+ VHI++ +PGRL ++ +++ + ++L V+DE D+++++ F ++
Sbjct: 159 IGGTSTQETREKCKQGVHIIIATPGRLIDMMKNKYLDATFMRLLVVDEADQMLDQGFSDN 218
Query: 702 INYIFSALPNHKQVIMSSATF 764
I +P Q+ + SATF
Sbjct: 219 FAEILKMVPGDIQIALFSATF 239
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 72.9 bits (171), Expect = 8e-12
Identities = 33/85 (38%), Positives = 53/85 (62%)
Frame = +3
Query: 525 GGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLNDI 704
GG+S+N + K +K V ++V +PGRL L N + VQ VLDE D++++ F ++
Sbjct: 110 GGVSINPQMMKLRKGVDVLVATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFAREL 169
Query: 705 NYIFSALPNHKQVIMSSATFQNIAR 779
N +F+ALP +Q ++ SATF + R
Sbjct: 170 NAVFAALPAQRQTLLFSATFSDDIR 194
Score = 51.2 bits (117), Expect = 3e-05
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL------NLNN 414
R L +Q P+P+Q +P G D++ A++GTGKT F++ L++L +N
Sbjct: 14 RNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQRLVQHGPAVSSN 73
Query: 415 GLQVMILTPTREIAAQICDVIKQIGSHHKGL 507
+V++L PTRE+A Q V++ ++ KGL
Sbjct: 74 RARVLVLVPTRELAEQ---VLQSFIAYGKGL 101
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 72.9 bits (171), Expect = 8e-12
Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKV-HIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEK 686
V V GG+++ +D K HIVVG+PGR+ LI +NL ++ FVLDECDK++E+
Sbjct: 142 VAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQ 201
Query: 687 -PFLNDINYIFSALPNHKQVIMSSATFQNIARKSICK 794
D+ IF + P+ KQV+M SAT R +CK
Sbjct: 202 LDMRRDVQEIFRSTPHGKQVMMFSATLSKDIR-PVCK 237
Score = 61.3 bits (142), Expect = 3e-08
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Frame = +1
Query: 217 YVHFHAS-FRIYT------RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVV 375
YV H+S FR + R ++ GF+ PS +Q +P G D+L +AKSG GKT V
Sbjct: 35 YVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAV 94
Query: 376 FSIIALEKL--NLNNGLQVMILTPTREIAAQI 465
F + L++L + NN V+++ TRE+A QI
Sbjct: 95 FVLATLQQLEPSDNNTCHVLVMCHTRELAFQI 126
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 72.5 bits (170), Expect = 1e-11
Identities = 32/100 (32%), Positives = 59/100 (59%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
+G V + GG S+ + + K HIVVG+PGR+K LI + ++L + F+LDE D++
Sbjct: 122 KGLKVLEIYGGASILDQMRALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEM 181
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
++ F++D+ +I P Q ++ SAT + ++ + +F
Sbjct: 182 LKMGFVDDVTWIMEQAPESAQRVLFSATMPPMVKEIVERF 221
Score = 70.1 bits (164), Expect = 6e-11
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMIL 435
L GF P+PIQ +P+ G D L +A++GTGKT FS+ L KLNL+ Q +++
Sbjct: 41 LTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKLNLSQYKPQAIVM 100
Query: 436 TPTREIAAQICDVIKQIGSHHKGL 507
PTRE+A Q+ IK +G + KGL
Sbjct: 101 APTRELAIQVAAEIKNLGQNIKGL 124
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 72.5 bits (170), Expect = 1e-11
Identities = 34/93 (36%), Positives = 55/93 (59%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
+ GG S++ + + K+ VHIVVG+PGR+ L+ ++ L V+ FVLDE D+++ F++
Sbjct: 105 IYGGQSIDRQMLQLKRGVHIVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFID 164
Query: 699 DINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
D+ I S P +Q + SAT R + KF
Sbjct: 165 DVEKILSQAPQDRQTALFSATMPPSIRMLVNKF 197
Score = 59.3 bits (137), Expect = 1e-07
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVMILTPTR 447
GF P+ IQ +P G D++ ++++GTGKT FS+ LE+L+ +Q ++LTPTR
Sbjct: 22 GFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILERLDPQQKAVQAIVLTPTR 81
Query: 448 EIAAQICDVIKQ 483
E+A Q+ D + Q
Sbjct: 82 ELAIQVHDAMAQ 93
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/89 (37%), Positives = 55/89 (61%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
VV GG+ +N I K + V ++V +PGRL L+ N + + +++ VLDE D++++ F+
Sbjct: 106 VVFGGVPINPQIQKLRHGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFI 165
Query: 696 NDINYIFSALPNHKQVIMSSATFQNIARK 782
DI I + LP +Q +M SATF + R+
Sbjct: 166 RDIKKILALLPAKRQNLMFSATFSDEIRE 194
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-----G 417
+ + G+ PSPIQ +P G D++ A++GTGKT F++ LE L+ N
Sbjct: 14 KAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQ 73
Query: 418 LQVMILTPTREIAAQICDVIKQIGSH 495
++ ++LTPTRE+AAQ+ + ++ G +
Sbjct: 74 IRALVLTPTRELAAQVSESVETYGKY 99
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/92 (38%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Frame = +1
Query: 223 HFHASF--RIYTRGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 396
HF A R RGL + F+ P+ IQ +P+ G DLL+++KSGTGKT+++ + AL+
Sbjct: 26 HFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTGMDLLVQSKSGTGKTLIYVVTALQ 85
Query: 397 KLNLN-NGLQVMILTPTREIAAQICDVIKQIG 489
+L+ +V+++ PTRE+A Q+ D+ + +G
Sbjct: 86 MCSLSTQHPEVLVILPTRELALQVHDIFRFLG 117
Score = 62.5 bits (145), Expect = 1e-08
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL-VEK 686
V MGG V D K + H+ +G+PGRL L +N+S V+L VLDE D+L V
Sbjct: 125 VSSFMGGTDVTRDREKLRN-CHVAIGTPGRLLQLHEKGVLNMSMVKLLVLDEADQLYVTA 183
Query: 687 PFLNDINYIFSALPNHKQVIMSSATF-QNIARK 782
+N + + LP +QVI SATF QN+ K
Sbjct: 184 SLQKTVNALIAVLPLQRQVIACSATFDQNLDEK 216
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/89 (37%), Positives = 54/89 (60%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
VV GG+ +N +A+ ++ V I++ +PGRL + NL VQ+ VLDE D++++ FL
Sbjct: 120 VVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFL 179
Query: 696 NDINYIFSALPNHKQVIMSSATFQNIARK 782
D+ I + LP +Q ++ SATF +K
Sbjct: 180 PDLQRILNLLPKERQTLLFSATFSPEIKK 208
Score = 50.8 bits (116), Expect = 4e-05
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL---------N 405
+ + G+ P+PIQ +P+ G D++ A++GTGKT FS+ +++L
Sbjct: 24 KAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASP 83
Query: 406 LNNGLQVMILTPTREIAAQICDVIKQIGSH 495
+ ++ +ILTPTRE+A Q+ + H
Sbjct: 84 ARHPVRALILTPTRELADQVAANVHAYAKH 113
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +3
Query: 525 GGLSVNEDIAKFKK-KVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLND 701
GG V D+ + KV +V+G+PGR+K LI + DV+ FVLDE D +++ F D
Sbjct: 73 GGTKVFGDLKVLRGGKVDVVIGTPGRIKDLIERGALKTDDVRYFVLDEVDVMLDMNFKED 132
Query: 702 INYIFSALPNHKQVIMSSATFQNIARK 782
I++I+S LP KQV SATF R+
Sbjct: 133 IDFIYSQLPEEKQVFFVSATFPKEVRE 159
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +1
Query: 307 VPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILTPTREIAAQICD 471
+P+ G D L++AK+GTGKT F + L +L G + +IL PTRE+A QI D
Sbjct: 3 IPVALQGRDCLIQAKTGTGKTAAFGLPILN--SLKEGEKALILAPTRELALQIRD 55
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 71.7 bits (168), Expect = 2e-11
Identities = 31/82 (37%), Positives = 53/82 (64%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
V+ GG++ N A +K + I++ +PGRL L+ H++L +++ FVLDE D++++ F+
Sbjct: 188 VIFGGVNQNPQTASLQKGIDILIATPGRLLDLMNQGHLHLRNIEFFVLDEADRMLDMGFI 247
Query: 696 NDINYIFSALPNHKQVIMSSAT 761
+DI I + LP KQ + SAT
Sbjct: 248 HDIRKILAELPKKKQSLFFSAT 269
Score = 62.9 bits (146), Expect = 9e-09
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL------NNGLQVMI 432
G+Q P+PIQ +PL G DLL A++GTGKT F+I L+ LN ++ +I
Sbjct: 101 GYQTPTPIQAEAIPLILDGNDLLGCAQTGTGKTAAFAIPVLQLLNAVKTNEKKRKIRSLI 160
Query: 433 LTPTREIAAQICDVIKQIGSHHKGLMS 513
+TPTRE+A QI + K G H GL S
Sbjct: 161 ITPTRELAIQIGESFKAYG-RHTGLTS 186
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/100 (33%), Positives = 59/100 (59%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
+G V + GG S + + K+ VH +VG+PGR+ I + L +++ FVLDE D++
Sbjct: 108 KGFHVLPIYGGQSYDIQLRPLKRGVHAIVGTPGRVMDHIEKKTLKLDNLKSFVLDEADEM 167
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
++ F++DI +I +P +Q+ + SAT N+ +K +F
Sbjct: 168 LKMGFIDDIKWIMQRIPEQRQIALFSATMPNVIKKIAKQF 207
Score = 62.5 bits (145), Expect = 1e-08
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMIL 435
L S G++ PSPIQ + D++ +A++GTGKT F + L+K+NLN N Q++IL
Sbjct: 27 LDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDKINLNINAPQLLIL 86
Query: 436 TPTREIAAQICDVIKQIGSHHKG 504
PTRE+A Q+ + ++ KG
Sbjct: 87 APTRELAIQVSEAVQTYARGMKG 109
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 71.3 bits (167), Expect = 3e-11
Identities = 35/93 (37%), Positives = 56/93 (60%)
Frame = +3
Query: 504 SDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVE 683
S + +++GG+S + A V+IVV +PGRL+ L+ N I+LS ++ F LDE D+L++
Sbjct: 98 SKIALILGGVSYEKQKAALNSGVNIVVATPGRLEDLLAQNKIDLSHIKTFTLDEADELLK 157
Query: 684 KPFLNDINYIFSALPNHKQVIMSSATFQNIARK 782
F N+I I + LP +Q +ATF +K
Sbjct: 158 IGFYNEIIKIMNKLPKKRQNFFFTATFDEKTKK 190
Score = 60.1 bits (139), Expect = 6e-08
Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVM 429
+ L GF+KP+ IQ +P G D++ +A++GTGKT F+I L L+ + N +Q +
Sbjct: 14 KSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSNLDCSINRIQHL 73
Query: 430 ILTPTREIAAQICDVIKQIGSH 495
++ PTRE+A QI D + +G +
Sbjct: 74 VIAPTRELANQIYDQLNILGKY 95
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 70.5 bits (165), Expect = 4e-11
Identities = 35/80 (43%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNG-LQVMILTPTR 447
GF+ +PIQ +PL G D++ +AK+G+GKT FS+ L K+NL+ LQ +IL PTR
Sbjct: 66 GFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPILNKINLDQPLLQALILCPTR 125
Query: 448 EIAAQICDVIKQIGSHHKGL 507
E+A+Q+ I+++G GL
Sbjct: 126 ELASQVVTEIRKLGRRLPGL 145
Score = 67.3 bits (157), Expect = 4e-10
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G V + GG S E + V IVVG+PGRL + N I+LS V+ VLDE DK++
Sbjct: 144 GLKVLAMTGGQSGREQADALENGVQIVVGTPGRLADFVGRNRIDLSAVKTVVLDEADKML 203
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATF 764
+ F ++I + LP +Q ++ SATF
Sbjct: 204 DMGFADEIKTVMRDLPGSRQTVLFSATF 231
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 70.5 bits (165), Expect = 4e-11
Identities = 33/83 (39%), Positives = 51/83 (61%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
VV GG+ +N I ++ V +V+ +PGRL + INL VQ+ VLDE D++++ FL
Sbjct: 129 VVYGGVDINPQIQTLRRGVELVIATPGRLLDHVQQKSINLGQVQVLVLDEADRMLDMGFL 188
Query: 696 NDINYIFSALPNHKQVIMSSATF 764
D+ I + LP +Q ++ SATF
Sbjct: 189 PDLQRIINLLPKTRQNLLFSATF 211
Score = 50.8 bits (116), Expect = 4e-05
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL---------N 405
+ + + G+ +P+PIQ +P+ G D++ A++GTGKT FS+ L +L
Sbjct: 33 KAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPILNRLMPLATENTSP 92
Query: 406 LNNGLQVMILTPTREIAAQI 465
+ ++ +ILTPTRE+A Q+
Sbjct: 93 ARHPVRALILTPTRELADQV 112
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 70.5 bits (165), Expect = 4e-11
Identities = 32/85 (37%), Positives = 54/85 (63%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
VV GG+S+N + K + V ++V +PGRL L N + L V++ VLDE D++++ F+
Sbjct: 108 VVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFI 167
Query: 696 NDINYIFSALPNHKQVIMSSATFQN 770
+DI + + LP +Q ++ SATF +
Sbjct: 168 HDIRRVLTKLPAKRQNLLFSATFSD 192
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-------NLN 411
R + G+++P+PIQ +P G DL+ A++GTGKT F++ L+ L
Sbjct: 14 RAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGR 73
Query: 412 NGLQVMILTPTREIAAQICDVIKQIGSH 495
++ +ILTPTRE+AAQI + ++ +
Sbjct: 74 RPVRALILTPTRELAAQIGENVRDYSKY 101
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 70.5 bits (165), Expect = 4e-11
Identities = 33/90 (36%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G+ V ++ GG + D +KK HIVVG+PGR++H+I N +++ +++LFV+DE D+++
Sbjct: 134 GARVALLSGGSPIAADKVALEKKPHIVVGTPGRVEHMININELSMDNIKLFVIDEADEML 193
Query: 681 EKPFLNDINYIFSALPN--HKQVIMSSATF 764
+ F + IF + N Q+ M SAT+
Sbjct: 194 KAGFQEQVKSIFRRITNKDEVQIAMFSATY 223
Score = 54.4 bits (125), Expect = 3e-06
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGL-QVM 429
+G+ S GF+ PS IQ + G D+ +A+SGTGKT F++ AL+ +++ + Q++
Sbjct: 51 KGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTGAFAVAALQICDMSQDVTQIL 110
Query: 430 ILTPTREIAAQICDVIKQIG 489
+L TREIAAQ + +G
Sbjct: 111 VLASTREIAAQNAARFEDLG 130
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 70.1 bits (164), Expect = 6e-11
Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 5/88 (5%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-----NG 417
+GL G+ KP+ IQ + LG G D+L A++G+GKT+ F I LE+L +G
Sbjct: 64 KGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAFLIPILERLYCKQWTRLDG 123
Query: 418 LQVMILTPTREIAAQICDVIKQIGSHHK 501
L +++TPTRE+A QI + ++++G HH+
Sbjct: 124 LGALVITPTRELAYQIFEELRRVGEHHE 151
Score = 44.8 bits (101), Expect = 0.003
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Frame = +3
Query: 528 GLSVNEDIAKFKK----KVHIVVGSPGR-LKHLIVGNHINLSDVQLFVLDECDKLVEKPF 692
GL + KF++ + +IV+G+PGR L+H+ + ++++ VLDE D+ ++ F
Sbjct: 155 GLIIGGKDLKFERNRMDQCNIVIGTPGRILQHMDENPLFDCVNMEILVLDEADRCLDMGF 214
Query: 693 LNDINYIFSALPNHKQVIMSSAT 761
+N I + LP +Q ++ SAT
Sbjct: 215 EQTMNAIVANLPAKRQTLLFSAT 237
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 70.1 bits (164), Expect = 6e-11
Identities = 34/89 (38%), Positives = 52/89 (58%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
VV GG+++ IA + V I+V +PGRL L+ +N S ++ VLDE D++++ FL
Sbjct: 114 VVFGGINIEPQIAALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFL 173
Query: 696 NDINYIFSALPNHKQVIMSSATFQNIARK 782
DI + + L +Q +M SATF RK
Sbjct: 174 PDIKRVMALLSPQRQSLMFSATFSGEIRK 202
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN---------LNNGLQ 423
G+ P+PIQ +P G D++ A++GTGKT F++ L +L + ++
Sbjct: 24 GYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLYRLQAYANTSVSPARHPVR 83
Query: 424 VMILTPTREIAAQICDVIKQIGSH 495
+I+ PTRE+A QI + +++ G +
Sbjct: 84 ALIMAPTRELAMQIDESVRKYGKY 107
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 70.1 bits (164), Expect = 6e-11
Identities = 32/86 (37%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Frame = +1
Query: 265 SSGFQKPSPIQLHGVPLG-KCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILTP 441
+ GF+KP+ IQ+ +PL ++++ +A++G+GKT F+I +E +N NNG++ +ILTP
Sbjct: 23 NKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIELVNENNGIEAIILTP 82
Query: 442 TREIAAQICDVIKQIGSHHKGLMSKL 519
TRE+A Q+ D I+ + + ++K+
Sbjct: 83 TRELAIQVADEIESLKGNKNLKIAKI 108
Score = 58.8 bits (136), Expect = 1e-07
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
+ GG ++ I K K +IVVG+PGR+ I +NL +V+ F+LDE D+++ F+
Sbjct: 108 IYGGKAIYPQI-KALKNANIVVGTPGRILDHINRGTLNLKNVKYFILDEADEMLNMGFIK 166
Query: 699 DINYIFSALPNHKQVIMSSATFQ----NIARK 782
D+ I +A K++++ SAT N+A+K
Sbjct: 167 DVEKILNACNKDKRILLFSATMPREILNLAKK 198
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 69.7 bits (163), Expect = 8e-11
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKK-VHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPF 692
V GG SV +++ + K V I++G+PGR+K LI +NLS V+ VLDE D++++ F
Sbjct: 101 VFYGGTSVKQNLDILQNKNVDILIGTPGRIKDLIDRKALNLSKVEYLVLDEFDQMLDMGF 160
Query: 693 LNDINYIFSALPNHKQVIMSSAT 761
+ DI YI S LP + M SAT
Sbjct: 161 IEDIEYIISFLPKERTTYMFSAT 183
Score = 65.3 bits (152), Expect = 2e-09
Identities = 31/84 (36%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVM 429
+ L +G+++P+PIQ +PL G+D+L +A +GTGKT F+I +EKL ++ +
Sbjct: 13 KALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDVKAL 72
Query: 430 ILTPTREIAAQICDVIKQIGSHHK 501
+LTPTRE+A Q+ + I + + +
Sbjct: 73 VLTPTRELAIQVKEQIYMLTKYKR 96
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 69.7 bits (163), Expect = 8e-11
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL-NNGLQVMI 432
G+ G++KPSPIQ +P+ G D+L AK+GTGK+ + I LE+L+L + +Q M+
Sbjct: 110 GIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMV 169
Query: 433 LTPTREIAAQICDV 474
+ PTRE+A Q+ +
Sbjct: 170 IVPTRELALQVSQI 183
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 69.7 bits (163), Expect = 8e-11
Identities = 32/77 (41%), Positives = 51/77 (66%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMI 432
+ L S GF++P+PIQ +P G D+L +A++GTGKT F I +EK+ G+Q +I
Sbjct: 15 QSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEKVVGKQGVQSLI 74
Query: 433 LTPTREIAAQICDVIKQ 483
L PTRE+A Q+ + +++
Sbjct: 75 LAPTRELAMQVAEQLRE 91
Score = 57.6 bits (133), Expect = 3e-07
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
QG V V GG+ + I KK IVVG+PGR+ + + + +LDE D++
Sbjct: 96 QGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEM 155
Query: 678 VEKPFLNDINYIFSALPN-HKQVIMSSATFQNIARKSICKF 797
+ F++D+ +I +P +Q ++ SAT + + +F
Sbjct: 156 MNMGFIDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQF 196
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 69.3 bits (162), Expect = 1e-10
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-NLNNGLQVM 429
+ L GF++PSPIQ +P G D++ +A++GTGKT F + +E+L +Q +
Sbjct: 19 KALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVERLVPGQRAVQAL 78
Query: 430 ILTPTREIAAQICDVIKQIGSH 495
+LTPTRE+A Q+ + I +IG H
Sbjct: 79 VLTPTRELAIQVAEEITKIGRH 100
Score = 59.7 bits (138), Expect = 8e-08
Identities = 27/81 (33%), Positives = 48/81 (59%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
+ GG S+ I + V +V+G+PGR+ + + ++LS V++ VLDE D++++ F+
Sbjct: 108 IYGGQSIERQIRSLRFGVDVVIGTPGRILDHLGRSTLDLSQVRMVVLDEADEMLDMGFIE 167
Query: 699 DINYIFSALPNHKQVIMSSAT 761
DI I P +Q ++ SAT
Sbjct: 168 DIEKILQNTPAERQTLLFSAT 188
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 69.3 bits (162), Expect = 1e-10
Identities = 32/94 (34%), Positives = 52/94 (55%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
+G ++ GG V + + K K +HI++G+PGRL + INL + + VLDE D++
Sbjct: 98 KGINILAAYGGQDVEQQLRKLKGSIHIIIGTPGRLLDHLRRKTINLGKLSMLVLDEADQM 157
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSATFQNIAR 779
+ FL D+ I + +P +Q + SAT N R
Sbjct: 158 LHMGFLRDVEDIMTHIPKRRQNMFFSATMPNQVR 191
Score = 59.3 bits (137), Expect = 1e-07
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMIL 435
L S +P+P+QL +P D++ +A++GTGKT+ F + LE++N+ +Q +I+
Sbjct: 18 LNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILERVNVEKPTIQALII 77
Query: 436 TPTREIAAQICDVIKQI 486
TPTRE+A QI K++
Sbjct: 78 TPTRELAIQITAETKKL 94
>UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocystis
pacifica SIR-1|Rep: DEAD/DEAH box helicase -
Plesiocystis pacifica SIR-1
Length = 1390
Score = 69.3 bits (162), Expect = 1e-10
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +3
Query: 507 DVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEK 686
DV V GG ++N + + VH VVG+PGR+ I ++LS V+ VLDECD+++
Sbjct: 258 DVLPVYGGTAMNPQLDALARGVHAVVGTPGRVLDHIRRKSLDLSKVRTVVLDECDEMLSM 317
Query: 687 PFLNDINYIFSALPNHKQVIMSSATF-QNIAR 779
FL DI I A P +Q + SAT ++IAR
Sbjct: 318 GFLEDIRAILRACPKERQTCLFSATVPRDIAR 349
Score = 41.9 bits (94), Expect = 0.018
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Frame = +1
Query: 265 SSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-----NLNNGLQVM 429
++G+ P+ +Q G D+L+++++G+GKT F + L G+Q++
Sbjct: 173 AAGWTAPTKVQARTYETMIQGTDVLVQSQTGSGKTGAFCLPWLANRFQPGDAAETGVQLI 232
Query: 430 ILTPTREIAAQICDVIKQI 486
+L PTRE+A Q+C+ + ++
Sbjct: 233 VLLPTRELAKQVCNELVRL 251
>UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-box
corepressor DP103 alpha; n=2; Dictyostelium
discoideum|Rep: Similar to Mus musculus (Mouse).
DEAD-box corepressor DP103 alpha - Dictyostelium
discoideum (Slime mold)
Length = 837
Score = 69.3 bits (162), Expect = 1e-10
Identities = 30/48 (62%), Positives = 38/48 (79%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 396
+GL G+Q+PSPIQL +PLG G DL+ +AKSGTGKT+VF +IALE
Sbjct: 56 KGLEDGGYQRPSPIQLKAIPLGISGVDLIAQAKSGTGKTIVFGVIALE 103
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/64 (37%), Positives = 41/64 (64%)
Frame = +3
Query: 540 NEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLNDINYIFS 719
NED+ + I+VG+PG++K LI H+ +++ ++DE DKL++ F IN+I+S
Sbjct: 204 NEDVNRLNG-TQIIVGTPGKIKSLIENLHLRTDTLKMVIMDEADKLLDASFSKTINWIYS 262
Query: 720 ALPN 731
A+ N
Sbjct: 263 AIGN 266
Score = 34.3 bits (75), Expect = 3.6
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +1
Query: 424 VMILTPTREIAAQICDVIKQIGSHHK 501
V+I+ PTREIA QI DVIK I + K
Sbjct: 152 VLIIAPTREIAVQIKDVIKSISKYCK 177
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 68.9 bits (161), Expect = 1e-10
Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +1
Query: 265 SSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTP 441
S G+ + +PIQ +P+ G DL +A++GTGKT F I A+E ++++ N Q +IL P
Sbjct: 18 SIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEHVDISINQTQSLILCP 77
Query: 442 TREIAAQICDVIKQIGSHHKGL 507
TRE+A Q+C +K++ KGL
Sbjct: 78 TRELALQVCTELKKLSKFKKGL 99
Score = 63.3 bits (147), Expect = 7e-09
Identities = 32/88 (36%), Positives = 47/88 (53%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
+G V V GG S+ I K HIVVG+PGR+ + +N S + +LDE D++
Sbjct: 97 KGLRVLAVYGGESIERQIRDLKAGAHIVVGTPGRIIDHLDRRTLNASHLSQIILDEADEM 156
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSAT 761
+ F DI I + LP +Q ++ SAT
Sbjct: 157 LNMGFREDIELILTRLPEERQTVLFSAT 184
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 68.5 bits (160), Expect = 2e-10
Identities = 33/93 (35%), Positives = 50/93 (53%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
+ GG I K+KV +VVG+PGR+ I ++ + VLDE D+++ FL
Sbjct: 155 IYGGTDYRNQIYALKRKVDVVVGTPGRIMDHIRQGTFKVNSINCLVLDEADEMLNMGFLE 214
Query: 699 DINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
DI +I LP +KQ+++ SAT N R K+
Sbjct: 215 DIEWIIDQLPKNKQMVLFSATMPNEIRNIAKKY 247
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGL--QVMI 432
L + G++ P+PIQ +P G DLL +A++GTGKT F++ +EKL N L +V++
Sbjct: 66 LSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEKLADNKELNAKVLV 125
Query: 433 LTPTREIAAQICDVIKQIGS 492
+TPTRE+A Q+ + K S
Sbjct: 126 MTPTRELATQVAESFKSYSS 145
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/90 (38%), Positives = 51/90 (56%)
Frame = +3
Query: 495 PQGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDK 674
PQ V VV GG+S+N + + IVV +PGRL L+ N + +S+V VLDE D+
Sbjct: 105 PQRVKVAVVFGGVSINPQMMNLRGGADIVVATPGRLLDLLEHNALKISEVSTLVLDEADR 164
Query: 675 LVEKPFLNDINYIFSALPNHKQVIMSSATF 764
L++ F ++ I LP +Q + SATF
Sbjct: 165 LLDLGFGEELGRILELLPPRRQNLFFSATF 194
Score = 49.6 bits (113), Expect = 9e-05
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Frame = +1
Query: 247 YTRGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-NLNNGL- 420
+ R + G++ P+ IQ +P G D++ A++G+GKT F++ L++L N G
Sbjct: 16 FLRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQLANAPTGTP 75
Query: 421 ---QVMILTPTREIAAQICDVI 477
+ +IL PTRE+AAQ+ + I
Sbjct: 76 RPTRGLILVPTRELAAQVGEAI 97
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 68.5 bits (160), Expect = 2e-10
Identities = 30/82 (36%), Positives = 50/82 (60%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
++ GG+ + K+ HI+V +PGRL L+ HI L+ +++FVLDE D++++ FL
Sbjct: 108 LIYGGVGQGNQVKALKRGAHILVATPGRLLDLMNQGHIKLNQLEVFVLDEADRMLDMGFL 167
Query: 696 NDINYIFSALPNHKQVIMSSAT 761
D+ I + LP +Q + SAT
Sbjct: 168 PDLKRIITQLPTQRQSLFFSAT 189
Score = 53.2 bits (122), Expect = 7e-06
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQV-- 426
+ L+ ++ P+PIQ +P G D+L A++GTGKT ++ L +L N+ +
Sbjct: 15 KALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPILNQLGKNSRKSIPH 74
Query: 427 ----MILTPTREIAAQICDVIKQIGSHHK 501
++L PTRE+A QI D G H K
Sbjct: 75 HPLALVLAPTRELAIQIGDSFDAYGRHLK 103
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 68.5 bits (160), Expect = 2e-10
Identities = 34/83 (40%), Positives = 50/83 (60%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMI 432
R L GF+ +PIQ +P+ G D++ EA++GTGKT F+I LE L Q +I
Sbjct: 17 RALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLENLEAERVPQALI 76
Query: 433 LTPTREIAAQICDVIKQIGSHHK 501
+ PTRE+ Q+ + IK+IG + K
Sbjct: 77 ICPTRELCLQVSEEIKRIGKYMK 99
Score = 66.1 bits (154), Expect = 1e-09
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKP 689
V V GG S+ IA+ ++ VH++V +PGRL I ++L + VLDE D+++
Sbjct: 102 VLAVYGGQSIGNQIAQLRRGVHVIVATPGRLIDHIERGTVDLGGISTVVLDEADEMLNMG 161
Query: 690 FLNDINYIFSALPNHKQVIMSSAT 761
F++DI I S +P +Q ++ SAT
Sbjct: 162 FIDDIERILSHVPERRQTMLFSAT 185
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/93 (36%), Positives = 52/93 (55%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
++GG N I KK V ++V +PGRL I ++LS +++ VLDE D++++ F +
Sbjct: 150 LVGGAPYNGQITALKKGVQVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFAD 209
Query: 699 DINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
DI+ I A P +Q IM SAT+ K F
Sbjct: 210 DISDILRAAPIDRQTIMCSATWDGPVGKIAASF 242
Score = 64.5 bits (150), Expect = 3e-09
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Frame = +1
Query: 268 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL----NLNNGLQVMIL 435
SG+ P+PIQ +P G DLLL A++G+GKT F I L++L + + + +IL
Sbjct: 62 SGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFVIPVLDRLSRATSFDKLTKALIL 121
Query: 436 TPTREIAAQICDVIKQIGSHHKGL 507
TPTRE+A Q+ D ++ +GL
Sbjct: 122 TPTRELAQQVHDSVRTYSKDMRGL 145
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/77 (38%), Positives = 50/77 (64%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILTPTRE 450
GF+ P+PIQ +PL G +L+ +A +GTGKT + + L+++ QV+I+TPTRE
Sbjct: 21 GFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQRIQRGKKAQVLIVTPTRE 80
Query: 451 IAAQICDVIKQIGSHHK 501
+A Q+ D + ++G + K
Sbjct: 81 LALQVADEVAKLGKYLK 97
Score = 60.1 bits (139), Expect = 6e-08
Identities = 28/93 (30%), Positives = 53/93 (56%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
V GG ++ I ++ V ++VG+PGR+ I +++++ +LDE D++++ F++
Sbjct: 103 VYGGQAIERQIRGLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFID 162
Query: 699 DINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
DI I + L N +Q ++ SAT + I KF
Sbjct: 163 DIEAILNTLTNRQQTLLFSATLPAPIKTIIKKF 195
>UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 643
Score = 68.1 bits (159), Expect = 2e-10
Identities = 40/109 (36%), Positives = 61/109 (55%), Gaps = 8/109 (7%)
Frame = +1
Query: 196 CSNSGKCYVHFHASFRIYTR---GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGK 366
C G V + F I R GL+ +GF P+ IQ G+P+ G D+L AK+G+GK
Sbjct: 41 CKEIGSSEVEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGK 100
Query: 367 TVVFSIIALE-----KLNLNNGLQVMILTPTREIAAQICDVIKQIGSHH 498
T+ F I +E K +GL ++++PTRE+A Q +V+ +IG+ H
Sbjct: 101 TLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKH 149
Score = 50.8 bits (116), Expect = 4e-05
Identities = 26/83 (31%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRL-KHLIVGNHINLSDVQLFVLDECDKLVEKPF 692
+++GG + + + K +IVV +PGRL +H+ + + + +Q+ VLDE D++++ F
Sbjct: 155 LIIGGKDLKNEQKRIMK-TNIVVCTPGRLLQHMDETPNFDCTSLQILVLDEADRILDMGF 213
Query: 693 LNDINYIFSALPNHKQVIMSSAT 761
+N I LP+ +Q ++ SAT
Sbjct: 214 APTLNAIIENLPSERQTLLYSAT 236
>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
35A - Oryza sativa subsp. japonica (Rice)
Length = 627
Score = 67.7 bits (158), Expect = 3e-10
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Frame = +3
Query: 522 MGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLND 701
+GG+ + + KK VHIVV +PGRLK L+ +NL + + LDE D+LV+ F +D
Sbjct: 299 IGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDD 358
Query: 702 INYIFSALPNHKQVIMSSAT----FQNIARKSICK 794
I +F +Q ++ SAT QN A+ ++ K
Sbjct: 359 IREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVK 393
Score = 49.2 bits (112), Expect = 1e-04
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI----IALEKLNL---- 408
R L G +P+PIQ+ G+P+ G D++ A +G+GKT+VF + +AL++ +
Sbjct: 195 RKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIV 254
Query: 409 -NNGLQVMILTPTREIAAQICDVIKQ 483
G MI+ P+RE+A Q DVI+Q
Sbjct: 255 PGEGPFGMIICPSRELAKQTYDVIEQ 280
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVM 429
RG+ + GF+KPS IQ + G+D++ +A+SGTGKT F+I L++L + Q +
Sbjct: 46 RGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQAL 105
Query: 430 ILTPTREIAAQICDVIKQIGSH 495
+L PTRE+A QI VI +G +
Sbjct: 106 VLAPTRELAQQIQKVILALGDY 127
Score = 58.4 bits (135), Expect = 2e-07
Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKV-HIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
G+ +GG +V ++ K + + HIVVG+PGR+ ++ +++ +++FVLDE D++
Sbjct: 129 GATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEM 188
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSAT 761
+ + F + I IF L QV++ SAT
Sbjct: 189 LSRGFKDQIYEIFQKLNTSIQVVLLSAT 216
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 67.7 bits (158), Expect = 3e-10
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-----NG 417
+GL S F K + IQ +P+ G D+L AK+G+GKT+ F + +EKL +G
Sbjct: 54 KGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKLYREKWTEFDG 113
Query: 418 LQVMILTPTREIAAQICDVIKQIGSH 495
L +I++PTRE+A QI +V+ +IGSH
Sbjct: 114 LGALIISPTRELAMQIYEVLTKIGSH 139
Score = 54.4 bits (125), Expect = 3e-06
Identities = 28/83 (33%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGR-LKHLIVGNHINLSDVQLFVLDECDKLVEKPF 692
+V+GG V ++ + + ++I++G+PGR L+HL +N S++Q+ VLDE D+ ++ F
Sbjct: 146 LVIGGKDVKFELERISR-INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGF 204
Query: 693 LNDINYIFSALPNHKQVIMSSAT 761
++ I S L +Q ++ SAT
Sbjct: 205 KKTLDAIVSTLSPSRQTLLFSAT 227
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 67.3 bits (157), Expect = 4e-10
Identities = 32/82 (39%), Positives = 50/82 (60%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
V+ GG+ + K KK V I+V +PGRL L ++LS +++FVLDE D++++ FL
Sbjct: 105 VIFGGVGQQPQVDKLKKGVDILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLDMGFL 164
Query: 696 NDINYIFSALPNHKQVIMSSAT 761
+D+ + LP KQ + SAT
Sbjct: 165 HDVRRVLKLLPAVKQTLFFSAT 186
Score = 60.9 bits (141), Expect = 4e-08
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN----LNNGL 420
+ L G++KPSPIQ +P G D+L A++GTGKT F+ L++L +
Sbjct: 14 KALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQRLGGDIPAGRPI 73
Query: 421 QVMILTPTREIAAQICDVIKQIGSH 495
+ +ILTPTRE+A QI + + G H
Sbjct: 74 RSLILTPTRELALQIQESFEAYGKH 98
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 67.3 bits (157), Expect = 4e-10
Identities = 32/89 (35%), Positives = 53/89 (59%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
VV GG+ +N I K + V ++V +PGRL L + + +++ VLDE D++++ F+
Sbjct: 106 VVFGGVPINPQIQKLRHGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFI 165
Query: 696 NDINYIFSALPNHKQVIMSSATFQNIARK 782
DI I + LP +Q +M SATF + R+
Sbjct: 166 RDIKKILAMLPAKRQNLMFSATFSDEIRE 194
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-----G 417
+ + G+ PSPIQ +P G D++ A++GTGKT F++ LE L+ N
Sbjct: 14 KAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQ 73
Query: 418 LQVMILTPTREIAAQICDVIKQIGSH 495
++ ++LTPTRE+AAQ+ + ++ G +
Sbjct: 74 IRALVLTPTRELAAQVSESVETYGKY 99
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/82 (40%), Positives = 49/82 (59%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
VV GG+S+N+ I + +I+VG+PGR LI +N V FVLDE D++++ F+
Sbjct: 102 VVYGGVSINKQIELILRGANIIVGTPGRTLDLIDRGILNFDKVSYFVLDEADEMLDMGFI 161
Query: 696 NDINYIFSALPNHKQVIMSSAT 761
DI I + LP +Q + SAT
Sbjct: 162 EDIKKIINVLPVERQSFLFSAT 183
Score = 60.1 bits (139), Expect = 6e-08
Identities = 24/74 (32%), Positives = 45/74 (60%)
Frame = +1
Query: 268 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILTPTR 447
+G+ +P+ +Q +P+ G DL++ +K+G+GKT + I + G++ +IL PTR
Sbjct: 20 TGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINNTAKEKGIRALILLPTR 79
Query: 448 EIAAQICDVIKQIG 489
E+A Q+ V + +G
Sbjct: 80 ELAVQVAKVSEALG 93
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 66.9 bits (156), Expect = 6e-10
Identities = 32/95 (33%), Positives = 51/95 (53%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKP 689
+ GG+SVN + + ++V +PGRL L+ N + L+ V VLDE D+++
Sbjct: 116 IVAAFGGVSVNLQMQSLRAGADVLVATPGRLLDLLASNALKLNRVLALVLDEADRMLSLG 175
Query: 690 FLNDINYIFSALPNHKQVIMSSATFQNIARKSICK 794
F +++N + ALP KQ ++ SATF R K
Sbjct: 176 FTDELNQVLEALPAKKQTLLYSATFPEEVRALTAK 210
Score = 50.0 bits (114), Expect = 7e-05
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Frame = +1
Query: 274 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-------NLNNGLQVMI 432
+ P+PIQ +P G D+L A +G+GKT F++ L++L ++ ++
Sbjct: 29 YAAPTPIQAATIPAVLSGRDVLAGANTGSGKTAAFAVPLLQRLFEAKTAEKSAGQVRCLV 88
Query: 433 LTPTREIAAQICDVIKQIGSHHKG 504
L PTRE+A Q+ D SH G
Sbjct: 89 LVPTRELAQQVADSFLSYASHFNG 112
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 66.9 bits (156), Expect = 6e-10
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL-KHLIVGNHINLSDVQLFVLDECDKL 677
G DV +++GGL + + KK HI+VGSPGR+ HL +L ++ VLDE DKL
Sbjct: 137 GLDVCLILGGLDMVSQALQLSKKPHIIVGSPGRIADHLQNTKGFSLETIKYLVLDEADKL 196
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSAT 761
+ F + +N I ++LP K + SAT
Sbjct: 197 LSTDFDDSLNKIITSLPKDKVTYLYSAT 224
Score = 55.2 bits (127), Expect = 2e-06
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK-LNLNNGLQVMILTPTR 447
G+++P+ IQ+ +P+ G D++ A++G+GKT F+I L+K L L +IL PTR
Sbjct: 60 GWKRPTKIQIEAIPIALSGKDIIGLAETGSGKTAAFTIPILQKLLEKPQRLFSLILAPTR 119
Query: 448 EIAAQICDVIKQIGS 492
E++ QI + + +GS
Sbjct: 120 ELSLQIKEQLISLGS 134
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 66.9 bits (156), Expect = 6e-10
Identities = 35/90 (38%), Positives = 51/90 (56%)
Frame = +3
Query: 495 PQGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDK 674
P G V GG S I+ + V IV+G+PGRL+ LI N + LSDV VLDE D+
Sbjct: 217 PCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADR 276
Query: 675 LVEKPFLNDINYIFSALPNHKQVIMSSATF 764
+++ F + +I S +Q++M SAT+
Sbjct: 277 MLDMGFEEPVRFILSNTNKVRQMVMFSATW 306
Score = 55.6 bits (128), Expect = 1e-06
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 10/82 (12%)
Frame = +1
Query: 274 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL-----EKLNLNNGLQ----- 423
F+KPSPIQ H P G DL+ AK+G+GKT+ F I A+ + + G +
Sbjct: 134 FEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPT 193
Query: 424 VMILTPTREIAAQICDVIKQIG 489
++L+PTRE+A QI DV+++ G
Sbjct: 194 CLVLSPTRELAVQISDVLREAG 215
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 66.5 bits (155), Expect = 7e-10
Identities = 36/95 (37%), Positives = 51/95 (53%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
+G V V GG + K+ IVVG+PGRL L+ N + L +++ VLDE D++
Sbjct: 104 RGVGVATVYGGAPFGPQVKALKQGTAIVVGTPGRLIDLLNKNVLQLDGLKVGVLDEADEM 163
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSATFQNIARK 782
+ F+ DI I A+PN Q + SAT N RK
Sbjct: 164 LNMGFIEDIETILKAVPNTAQRALFSATMPNAIRK 198
Score = 64.1 bits (149), Expect = 4e-09
Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTRE 450
F P+PIQL +P G D+L EA++GTGKT F + AL K++ + QV+++TPTRE
Sbjct: 28 FLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPALAKIDASVKQTQVLVVTPTRE 87
Query: 451 IAAQICDVIKQIGSHHKGL 507
+A Q+ + ++ + +G+
Sbjct: 88 LAIQVAEALEGFAAKMRGV 106
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 66.5 bits (155), Expect = 7e-10
Identities = 31/90 (34%), Positives = 53/90 (58%)
Frame = +3
Query: 513 EVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPF 692
+ V GG+S+ + + + V I+V +PGRL LI I ++++ VLDE D++++ F
Sbjct: 128 DAVFGGVSIRPQVKRLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGF 187
Query: 693 LNDINYIFSALPNHKQVIMSSATFQNIARK 782
+ DI + LP ++Q +M SATF +K
Sbjct: 188 IRDIKKVIEYLPKNRQNMMFSATFSTPIKK 217
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-----G 417
R + SG+ P+PIQ +P G D++ A++GTGKT F + +E L +
Sbjct: 37 RSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPIIELLRAEDKPKRYQ 96
Query: 418 LQVMILTPTREIAAQI 465
+ ++LTPTRE+AAQ+
Sbjct: 97 VHSLVLTPTRELAAQV 112
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 66.5 bits (155), Expect = 7e-10
Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGR-LKHLIVGNHINLSDVQLFVLDECDKL 677
G ++ V++GG + K+ V IV+ +PGR L+H+ G ++LS V++FVLDE D++
Sbjct: 101 GINIAVLVGGKDLESQQKILKEGVDIVIATPGRVLEHVDKG--LSLSHVEIFVLDEADRM 158
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSATFQNIARK 782
++ F+ +I I LP Q ++ SATF + RK
Sbjct: 159 LDMGFMKEIRRIHPILPKRHQTLLFSATFSDKVRK 193
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-----NLNNGLQVMIL 435
G++KP+ IQ +PL D+ A++GTGKT F + L++L + L+ +++
Sbjct: 20 GYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQRLRKTSDDKQRALRGLVI 79
Query: 436 TPTREIAAQI 465
PTRE++ QI
Sbjct: 80 APTRELSIQI 89
>UniRef50_A5K5I2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1181
Score = 66.5 bits (155), Expect = 7e-10
Identities = 28/85 (32%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKP 689
+ V++GG+++N+ K+ + I++ +PGRL ++ +++L VQ+ ++DE D+L+E
Sbjct: 269 INVIIGGINLNKQFDMLKENLDILICTPGRLSFILKETNLSLEKVQMLIIDEADRLLELN 328
Query: 690 FLNDINYIFSAL-PNHKQVIMSSAT 761
+ ND+N I+ +L KQ ++ SAT
Sbjct: 329 YFNDMNNIYKSLHRTDKQTLLISAT 353
Score = 42.3 bits (95), Expect = 0.014
Identities = 26/94 (27%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Frame = +1
Query: 214 CYVHFHASFRIYTRGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 393
C+ H S + + + +P+ IQ +P G D++ +K+GTGK++V+ +
Sbjct: 167 CFHHLGLSENMCRSISSNLKYNRPTDIQKLCIPKIVSGRDVICISKTGTGKSLVYVSTLV 226
Query: 394 EKLNLNN---GLQVMILTPTREIAAQICDVIKQI 486
+ L ++ G++ ++L PT+E+A QI + K+I
Sbjct: 227 DLLAEHSQFFGVRGLVLVPTKELAIQIFKLSKKI 260
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 66.5 bits (155), Expect = 7e-10
Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Frame = +3
Query: 510 VEVVMGGLSV--NEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVE 683
V V GG+++ ++D+ K + HIVVG+PGR+ L ++L +V+ F+LDECDK++E
Sbjct: 146 VSVFYGGVNIKIHKDLLK-NECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLE 204
Query: 684 K-PFLNDINYIFSALPNHKQVIMSSATFQNIARKSICK 794
D+ IF P+ KQV+M SAT R +CK
Sbjct: 205 SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR-PVCK 241
Score = 63.7 bits (148), Expect = 5e-09
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 8/95 (8%)
Frame = +1
Query: 211 KCYVHFHAS-FRIYT------RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKT 369
K YV H+S FR + R ++ SGF+ PS +Q +P G D++ +AKSG GKT
Sbjct: 38 KGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKT 97
Query: 370 VVFSIIALEKLNLNNG-LQVMILTPTREIAAQICD 471
VF + L+++ + G + ++L TRE+A QIC+
Sbjct: 98 AVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICN 132
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 66.5 bits (155), Expect = 7e-10
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN----NGL 420
+GL S G+ KPSPIQ +P+ G D++ A +G+GKT F I +E+L
Sbjct: 244 KGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIAST 303
Query: 421 QVMILTPTREIAAQICDVIKQIGSHHKGL 507
+V++L PTRE+A Q+ DV KQI G+
Sbjct: 304 RVIVLLPTRELAIQVADVGKQIARFVSGI 332
Score = 59.7 bits (138), Expect = 8e-08
Identities = 26/86 (30%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGR-LKHLIVGNHINLSDVQLFVLDECDKLVEKPF 692
+ +GGL++ + K + IV+ +PGR + H+ N+ V++ V+DE D+++E+ F
Sbjct: 336 LAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGF 395
Query: 693 LNDINYIFSALPNHKQVIMSSATFQN 770
+++N I LP+++Q ++ SAT +
Sbjct: 396 QDELNEIMGLLPSNRQNLLFSATMNS 421
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 66.1 bits (154), Expect = 1e-09
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGR-LKHLIVGNHINLSDVQLFVLDECDKL 677
G V V GG S + +A K+ VH++VG+PGR + HL G ++LS+++ VLDE D++
Sbjct: 112 GFRVLPVYGGQSYGQQLAALKRGVHVIVGTPGRVIDHLERGT-LDLSELKTLVLDEADEM 170
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSAT 761
+ F+ D+ + LP +QV + SAT
Sbjct: 171 LRMGFIEDVEEVLRKLPASRQVALFSAT 198
Score = 60.1 bits (139), Expect = 6e-08
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTR 447
G++ PSPIQ +P G D+L +A++GTGKT F++ L + LN QV++L PTR
Sbjct: 34 GYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTRTVLNQVKPQVLVLAPTR 93
Query: 448 EIAAQICDVIKQIGSHHKG 504
E+A Q+ + ++ + G
Sbjct: 94 ELAIQVAEAFQRYAASISG 112
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 66.1 bits (154), Expect = 1e-09
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G V V GG S++ I K+ VHI+V +PGRL L+ ++LS V V+DE D+++
Sbjct: 100 GLKVLPVYGGSSIDSQIRSLKRGVHIIVATPGRLLDLMERKTVSLSTVHNIVMDEADEML 159
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATFQ-NIARKS 785
F + IN I + +P + ++ SAT IAR S
Sbjct: 160 NMGFTDSINAILADVPKERNTLLFSATMSPEIARIS 195
Score = 50.4 bits (115), Expect = 5e-05
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Frame = +1
Query: 271 GFQKPSPIQLHGVP--LGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGL-QVMILTP 441
G++ P P+Q +P LG+ D++ A++GTGKT F + L+++++ N + Q +IL P
Sbjct: 21 GYENPMPVQEEVIPYLLGENN-DVVALAQTGTGKTAAFGLPLLQQIDVKNRVPQSLILCP 79
Query: 442 TREIAAQICDVIKQIGSHHKGL 507
TRE+ QI + + GL
Sbjct: 80 TRELCLQIAGDLNDYSKYIDGL 101
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 66.1 bits (154), Expect = 1e-09
Identities = 27/82 (32%), Positives = 51/82 (62%)
Frame = +3
Query: 522 MGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLND 701
+GG ++N D+ +K+H++VG+PGRL L + L+ V+ VLDE D++++ F+ND
Sbjct: 158 IGGTNINTDMKVLSRKLHVIVGTPGRLLDLTNRKLLKLNQVKTLVLDEFDRMLDMGFVND 217
Query: 702 INYIFSALPNHKQVIMSSATFQ 767
+ + + +Q ++ SAT +
Sbjct: 218 VKKLVGGMTQREQTMLFSATLE 239
Score = 43.2 bits (97), Expect = 0.008
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 244 IYTRGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNG-L 420
+ R L G++ + IQ + G DLL + +G+GKT F I +E N G
Sbjct: 65 VMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIPIIEHALKNPGQF 124
Query: 421 QVMILTPTREIAAQICDVIKQI 486
+I+TPTRE+A QI K +
Sbjct: 125 TALIVTPTRELALQIDQEFKSL 146
>UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative -
Leishmania major
Length = 435
Score = 66.1 bits (154), Expect = 1e-09
Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVH-IVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEK-P 689
V GG+ +E++ + KK+V I+VG+PGR+K LI + + V+ FV+DE D+ +E
Sbjct: 142 VFFGGIPEDENVKQLKKEVPAIIVGTPGRMKALIQNKAFDTTHVKWFVVDEFDRCLEDVK 201
Query: 690 FLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
D+ IF LP KQV+M SAT + R KF
Sbjct: 202 MRRDVQEIFMKLPKEKQVMMFSATMTDELRDVAKKF 237
Score = 49.6 bits (113), Expect = 9e-05
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Frame = +1
Query: 268 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-NLNNG----LQVMI 432
+GF+ PS +Q +P G D+L +AKSG GKT VF LE++ + G Q ++
Sbjct: 54 NGFEHPSEVQHQALPKAMLGADILAQAKSGMGKTAVFVFALLEQVEKVPQGQKPYCQAVV 113
Query: 433 LTPTREIAAQICDVIKQIGSH 495
L RE+A QI K+ +
Sbjct: 114 LVHARELAYQIEQEFKRFSKY 134
>UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform a
variant; n=3; Tetrapoda|Rep: ATP-dependent RNA helicase
ROK1 isoform a variant - Homo sapiens (Human)
Length = 512
Score = 66.1 bits (154), Expect = 1e-09
Identities = 31/73 (42%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN--LNNGLQV 426
+ ++ +GFQ P+PIQ+ +P+ G +LL A +G+GKT+ FSI L +L N G +
Sbjct: 177 QNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRA 236
Query: 427 MILTPTREIAAQI 465
+I++PTRE+A+QI
Sbjct: 237 LIISPTRELASQI 249
Score = 39.1 bits (87), Expect = 0.13
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Frame = +3
Query: 555 KFKKKVHIVVGSPGRLKHLIVGNH--INLSDVQLFVLDECDKLVE---KPFLNDINYIFS 719
K KK I+V +P RL +L+ + I+L+ V+ V+DE DKL E F + + IF
Sbjct: 280 KSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFL 339
Query: 720 ALPNHK-QVIMSSATF 764
A +HK + M SATF
Sbjct: 340 ACTSHKVRRAMFSATF 355
>UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX52;
n=37; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX52 - Homo sapiens (Human)
Length = 599
Score = 66.1 bits (154), Expect = 1e-09
Identities = 31/73 (42%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN--LNNGLQV 426
+ ++ +GFQ P+PIQ+ +P+ G +LL A +G+GKT+ FSI L +L N G +
Sbjct: 178 QNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRA 237
Query: 427 MILTPTREIAAQI 465
+I++PTRE+A+QI
Sbjct: 238 LIISPTRELASQI 250
Score = 39.1 bits (87), Expect = 0.13
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Frame = +3
Query: 555 KFKKKVHIVVGSPGRLKHLIVGNH--INLSDVQLFVLDECDKLVE---KPFLNDINYIFS 719
K KK I+V +P RL +L+ + I+L+ V+ V+DE DKL E F + + IF
Sbjct: 281 KSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFL 340
Query: 720 ALPNHK-QVIMSSATF 764
A +HK + M SATF
Sbjct: 341 ACTSHKVRRAMFSATF 356
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL-NNGLQVMI 432
G+ G++ PS IQ +P+ G D+L AK+GTGK+ + I LE+L+L + +Q M+
Sbjct: 96 GIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMV 154
Query: 433 LTPTREIAAQICDVIKQIGSHHKG 504
+ PTRE+A Q+ + Q+ H G
Sbjct: 155 IVPTRELALQVSQICIQVSKHMGG 178
Score = 62.9 bits (146), Expect = 9e-09
Identities = 29/88 (32%), Positives = 50/88 (56%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G+ V GG ++ +D+ + H+V+ +PGR+ LI + VQ+ VLDE DKL+
Sbjct: 178 GAKVMATTGGTNLRDDVMRLDDTGHVVIATPGRILDLIKKCLEKVDHVQMVVLDEADKLL 237
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATF 764
+ F+ + LP ++Q+++ SATF
Sbjct: 238 SQDFVQIMEAFILTLPKNRQILLYSATF 265
>UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein;
n=14; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 451
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/84 (34%), Positives = 51/84 (60%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKP 689
++++ GG++ E +A+ K +VV +PGRL L +HI+L ++ VLDE D+L+E
Sbjct: 133 IQLLCGGIAQEEQLAELAAKPQLVVATPGRLLDLCTQSHISLDSIKYLVLDEADRLLEMG 192
Query: 690 FLNDINYIFSALPNHKQVIMSSAT 761
F D+ + + + KQ ++ SAT
Sbjct: 193 FWPDVQKLMAMMLKRKQTLLFSAT 216
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/88 (36%), Positives = 51/88 (57%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
+G V + GG++ I + V I+VG+PGRL L H+ L V+ VLDE D++
Sbjct: 209 RGVRVLPIYGGVAYEPQIEALRSGVEILVGTPGRLLDLAKQKHLKLDRVRALVLDEADRM 268
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSAT 761
++ FL+D+ I + LP +Q ++ SAT
Sbjct: 269 LDLGFLDDVERILAILPEDRQTMLFSAT 296
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL----NLNNGL-Q 423
L ++G + IQ + +P+ G DL+ +A +GTGKT+ F + LE++ +G Q
Sbjct: 125 LAAAGITRAFAIQEYALPIALRGVDLIGQAPTGTGKTLGFGVPLLEQVLAPAEGGDGTPQ 184
Query: 424 VMILTPTREIAAQICDVIKQIGS 492
+++ PTRE+ Q+ ++ GS
Sbjct: 185 ALVVVPTRELGIQVAKDLQAAGS 207
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN---GLQ 423
+G++ G++ P+PIQ +PL G D++ A++G+GKT F I EKL + G +
Sbjct: 49 KGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEKLKIRQAKVGAR 108
Query: 424 VMILTPTREIAAQICDVIKQIG 489
+IL+PTRE+A Q IK++G
Sbjct: 109 ALILSPTRELALQTLKFIKELG 130
Score = 57.2 bits (132), Expect = 4e-07
Identities = 25/91 (27%), Positives = 47/91 (51%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G +++GG ++ + I++ +PGR H+ + + L++++ V DE D+L
Sbjct: 134 GLKATIILGGDNMENQFSAIHGNPDILIATPGRFLHICIEMDLQLNNIEYVVFDEADRLF 193
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATFQNI 773
E F IN I + LP +Q ++ SAT +
Sbjct: 194 EMGFGEQINEIINRLPESRQTLLFSATLPKL 224
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVM 429
RG+ + GF+KPS IQ + GFD++ +++SGTGKT + I AL++++ + Q +
Sbjct: 34 RGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYVIAALQRIDMMKEDTQAI 93
Query: 430 ILTPTREIAAQICDVI 477
IL PTRE+A QI V+
Sbjct: 94 ILAPTRELANQIQKVV 109
Score = 37.5 bits (83), Expect = 0.39
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +3
Query: 597 RLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLNDINYIFSALPNHKQVIMSSAT 761
R+ ++ ++ ++L VLDE D+++ F + I+ IF LP + Q I+ SAT
Sbjct: 112 RVFDVLARRAVSAKAIRLLVLDEADQMLGNGFKDQIHEIFCKLPTNVQAILLSAT 166
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/90 (35%), Positives = 50/90 (55%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G +V VV GG S + ++ +VVG+PGRL LI + L ++ VLDE D+++
Sbjct: 151 GRNVLVVYGGSSYQAQVGGLRRGARVVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEML 210
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATFQN 770
F++DI I S P +Q ++ SAT +
Sbjct: 211 SMGFIDDIETILSQTPKDRQTMLFSATLSS 240
Score = 63.3 bits (147), Expect = 7e-09
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNG-LQVMIL 435
L+ GF +P+PIQ +PL G DL+ +A++GTGKT F + L ++ + +Q ++L
Sbjct: 70 LVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLNNIDFSKKCVQALVL 129
Query: 436 TPTREIAAQICDVI 477
PTRE+A Q+ D +
Sbjct: 130 APTRELAQQVGDAL 143
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/91 (35%), Positives = 52/91 (57%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKP 689
V + GG+ + K K+ I+V +PGRL IV +++LS+V+ VLDE D++++
Sbjct: 105 VLTIYGGMKMATQAQKLKQGADIIVATPGRLLEHIVACNLSLSNVEFLVLDEADRMLDMG 164
Query: 690 FLNDINYIFSALPNHKQVIMSSATFQNIARK 782
F DI I A+ +Q ++ SATF +K
Sbjct: 165 FSTDIQKILQAVNKKRQNLLFSATFSTAVKK 195
Score = 63.3 bits (147), Expect = 7e-09
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN------LNN 414
R + G+Q +P+Q +P + G D+L A++GTGKT F++ L+K++ ++
Sbjct: 14 RAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQKMHERPMTVQHS 73
Query: 415 GLQVMILTPTREIAAQICDVIKQIGSH 495
+ +ILTPTRE+AAQ+ D I H
Sbjct: 74 NARALILTPTRELAAQVADNISAYSKH 100
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 65.3 bits (152), Expect = 2e-09
Identities = 28/81 (34%), Positives = 48/81 (59%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
+ GG+ N + K+ VH+ + +PGRL L+ +++LS + FVLDE D++++ F+
Sbjct: 103 IFGGVGQNPQVRALKRGVHVAIATPGRLLDLMDQGYVDLSQAKTFVLDEADRMLDMGFMP 162
Query: 699 DINYIFSALPNHKQVIMSSAT 761
+ I S LP +Q I +AT
Sbjct: 163 ALKTIVSKLPKQRQTIFFTAT 183
Score = 51.6 bits (118), Expect = 2e-05
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGL------ 420
L + + P+PIQ +P G DL+ A++GTGKT F++ L +L+L+
Sbjct: 11 LATEKYHTPTPIQGQAIPHLLEGSDLIGCAQTGTGKTAAFALPILNQLDLDRSRADACAP 70
Query: 421 QVMILTPTREIAAQICDVIKQIGSHHK 501
QV++L+PTRE+A QI G + K
Sbjct: 71 QVLVLSPTRELAVQIAQSFNVYGRNVK 97
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 65.3 bits (152), Expect = 2e-09
Identities = 29/75 (38%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL-NNGLQVMILTPTR 447
GF++ +PIQ +PL D++ +A++GTGKT F I +EK+N+ N+ +Q +++ PTR
Sbjct: 21 GFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEKVNVKNSAVQALVVAPTR 80
Query: 448 EIAAQICDVIKQIGS 492
E+A Q+ + + +IG+
Sbjct: 81 ELAIQVSEELYKIGA 95
Score = 62.9 bits (146), Expect = 9e-09
Identities = 31/93 (33%), Positives = 49/93 (52%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
+ GG + I KK H++VG+PGR+ I + L V VLDE D+++ F+
Sbjct: 104 IYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIE 163
Query: 699 DINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
DI I S +P +Q ++ SAT + R+ +F
Sbjct: 164 DIEAILSHVPAERQTLLFSATMPDPIRRIAERF 196
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 65.3 bits (152), Expect = 2e-09
Identities = 29/74 (39%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTR 447
GF++ +PIQ +PLG D++ +A++GTGKT F I +EK+N + +Q +++ PTR
Sbjct: 22 GFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTR 81
Query: 448 EIAAQICDVIKQIG 489
E+A Q+ + + +IG
Sbjct: 82 ELAIQVSEELYKIG 95
Score = 62.1 bits (144), Expect = 2e-08
Identities = 30/81 (37%), Positives = 47/81 (58%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
+ GG + I KK +I+VG+PGRL I I L++V V+DE D+++ F++
Sbjct: 105 IYGGQDIGRQIRALKKNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFID 164
Query: 699 DINYIFSALPNHKQVIMSSAT 761
DI I S +P+ Q ++ SAT
Sbjct: 165 DIESILSNVPSEHQTLLFSAT 185
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/93 (34%), Positives = 51/93 (54%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
+ GG +N I KK HI+VG+PGR+ I + L +V+ VLDE D+++ F+
Sbjct: 104 IYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIE 163
Query: 699 DINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
DI I + +P Q ++ SAT + R+ +F
Sbjct: 164 DIEAILTDVPETHQTLLFSATMPDPIRRIAERF 196
Score = 62.1 bits (144), Expect = 2e-08
Identities = 28/80 (35%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +1
Query: 265 SSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTP 441
S GF++ +PIQ +P G D++ +A++GTGKT F + L+K++ + +Q +++ P
Sbjct: 19 SMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAP 78
Query: 442 TREIAAQICDVIKQIGSHHK 501
TRE+A Q+ + + +IG H +
Sbjct: 79 TRELAIQVGEELYKIGKHKR 98
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 64.9 bits (151), Expect = 2e-09
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFK-KKVHIVVGSPGRLKHLIVGNH--INLSDVQLFVLDECDK-L 677
V+ V GG+ + DI K KK HI+V +PGR LI I +++ F++DECD+ L
Sbjct: 137 VKAVYGGVEESVDIHTLKTKKPHILVATPGRCLSLIKAKPSVIETQNIEYFIIDECDRVL 196
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
+D+ IF LP KQV+M S T + ++K+ KF
Sbjct: 197 SSNKMRSDVQNIFYELPRKKQVMMFSGTMSDESKKTCRKF 236
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-NLNNGLQVM 429
R + +GF++PS +Q +P G D+L +AK+GTGKT VF + L +L + +
Sbjct: 51 RSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLNQLPDDAKPFSCL 110
Query: 430 ILTPTREIAAQICDVIKQIG 489
+L TRE+A QI + K++G
Sbjct: 111 VLCHTRELAFQIKNEFKRLG 130
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 64.9 bits (151), Expect = 2e-09
Identities = 36/94 (38%), Positives = 54/94 (57%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G V GG + + I + K+ IVV +PGRL+ L++ I L+ VLDE D+++
Sbjct: 96 GLKTATVYGGTAYGKQIERIKQ-ASIVVATPGRLQDLLMSGKIKLNP-HFVVLDEADEML 153
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATFQNIARK 782
+ FL++I IF+ LP +Q +M SAT N RK
Sbjct: 154 DMGFLDEIKNIFTFLPKERQTLMFSATMPNGIRK 187
Score = 64.5 bits (150), Expect = 3e-09
Identities = 25/74 (33%), Positives = 48/74 (64%)
Frame = +1
Query: 268 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILTPTR 447
+GF++PSP+Q +PL G D++ +A++GTGKT F + + + + ++ +++ PTR
Sbjct: 19 AGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMSMMKADGSVEGLVIVPTR 78
Query: 448 EIAAQICDVIKQIG 489
E+A Q+ D + + G
Sbjct: 79 ELAMQVSDELFRFG 92
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVP-LGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQV 426
R +I GF+ P+ +Q +P L + DL+ A++GTGKT F ++K++ NN Q
Sbjct: 15 RAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQKIDANNRNTQA 74
Query: 427 MILTPTREIAAQICDVIKQIGSHHKGL 507
+IL+PTRE+ QI + +K + KG+
Sbjct: 75 LILSPTRELCLQITNELKNYSKYEKGI 101
Score = 60.9 bits (141), Expect = 4e-08
Identities = 29/88 (32%), Positives = 48/88 (54%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
+G +V V GG S+ E K+ I+V +PGR++ +I +++S + +LDE D++
Sbjct: 99 KGINVVAVYGGASITEQARDIKRGAQIIVATPGRMQDMINRRLVDISQINYCILDEADEM 158
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSAT 761
+ F DI I S P+ K + SAT
Sbjct: 159 LNMGFYEDIVNILSTTPDEKNTWLFSAT 186
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/89 (34%), Positives = 54/89 (60%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
V+ GG+++++ A + IVV + GRL + +I+L+ V++ VLDE D++++ F+
Sbjct: 138 VLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLDEADRMLDMGFI 197
Query: 696 NDINYIFSALPNHKQVIMSSATFQNIARK 782
+DI I LP +Q ++ SATF RK
Sbjct: 198 DDIRKIMQMLPKQRQTLLFSATFSAPIRK 226
Score = 57.6 bits (133), Expect = 3e-07
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 9/78 (11%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN---------LN 411
L + G++ P+PIQ +P G DLL A++GTGKT F + +LE+L
Sbjct: 44 LTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPSLERLKRYATASTSPAM 103
Query: 412 NGLQVMILTPTREIAAQI 465
+ +++++LTPTRE+A QI
Sbjct: 104 HPVRMLVLTPTRELADQI 121
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/91 (37%), Positives = 52/91 (57%)
Frame = +3
Query: 525 GGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLNDI 704
GG + ED+ KK H +VG+PGR+ HL+ + ++ ++ FVLDE D L+ K F DI
Sbjct: 114 GGRWLGEDLKNLKKNFHGIVGTPGRVLHLLQIGSLAITKIRTFVLDEADILMNKNFKIDI 173
Query: 705 NYIFSALPNHKQVIMSSATFQNIARKSICKF 797
I+ L + Q+I+ SAT ++ KF
Sbjct: 174 FNIYRYLNSKVQIIICSATIPLYTLQAASKF 204
Score = 41.1 bits (92), Expect = 0.031
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +1
Query: 307 VPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQ 483
+PL K G D++ ++ SGTGKT + I +L + N Q +IL PTRE++ QI +V
Sbjct: 42 IPLLK-GRDIIYQSPSGTGKTTCYIIGTSNQLCQSINSPQCLILVPTRELSIQIRNVFNV 100
Query: 484 IGSHHK 501
+ + K
Sbjct: 101 LNIYTK 106
>UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase; n=3;
Cryptosporidium|Rep: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase - Cryptosporidium
parvum Iowa II
Length = 770
Score = 64.9 bits (151), Expect = 2e-09
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-----GL 420
GL + G+ + + IQ +P G D++ +A++G+GKT+ + I LE + +N GL
Sbjct: 85 GLRAEGYYQMTLIQRDTLPHSLQGRDIIGQARTGSGKTLAYVIPILENIYRDNYCSIDGL 144
Query: 421 QVMILTPTREIAAQICDVIKQIGSHHKGL 507
+ILTPTRE+A+Q+ DVIK+IG H L
Sbjct: 145 LSLILTPTRELASQVFDVIKEIGKFHSTL 173
Score = 46.4 bits (105), Expect = 8e-04
Identities = 24/85 (28%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRL-KHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
++GG + + ++ ++I+V +PGRL +H+ + +++++ V+DE D++++ FL
Sbjct: 178 IVGGKDIKSESSRINM-LNILVATPGRLIQHMDESPLWDANNLKILVIDEVDRMLDMGFL 236
Query: 696 NDINYIFSALPNH---KQVIMSSAT 761
NDI I +P+ +Q ++ SAT
Sbjct: 237 NDIKIILDGIPSSSSGRQTMLFSAT 261
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRL-KHLIVGNHINLSDVQLFVLDECDKLVEKPF 692
+++GGLS + +K +V+ +PGRL HL+ + I L D+++ +LDE D+L++ F
Sbjct: 294 LIVGGLSNKAQEVELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGF 353
Query: 693 LNDINYIFSALPNHKQVIMSSATFQN 770
++IN I + P ++Q ++ SAT +
Sbjct: 354 KDEINKIVESCPTNRQTMLFSATLND 379
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN----GLQVMILT 438
GF +P+PIQ +PL G D+L A +G+GKT F + LE+L + ++V+IL
Sbjct: 209 GFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILL 268
Query: 439 PTREIAAQICDVIKQI 486
PTRE+A Q V++ +
Sbjct: 269 PTRELALQCQSVMENL 284
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVM 429
R + GF++ +PIQ +PL G DL+ +A++GTGKT F I +E + + G+Q +
Sbjct: 15 RAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEAIRPTSKGVQGL 74
Query: 430 ILTPTREIAAQICDVIKQIG 489
++ PTRE+A Q+ + + +IG
Sbjct: 75 VVVPTRELAVQVAEELTRIG 94
Score = 62.9 bits (146), Expect = 9e-09
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
+ GG + ++ HIVVG+PGRL + ++ SD+++ VLDE DK+++ F++
Sbjct: 104 IYGGQDFRSQVKALEELPHIVVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLDMGFID 163
Query: 699 DINYIFSALPNHKQVIMSSATF----QNIARK 782
+ I LP +Q ++ SAT Q +ARK
Sbjct: 164 EAEKILKKLPERRQTLLFSATLSPPVQMLARK 195
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTR 447
GF++P+PIQ +P G D+ +A++GTGKT F I +E+L+ +N +Q ++L+PTR
Sbjct: 24 GFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPIIERLDPDNKNVQALVLSPTR 83
Query: 448 EIAAQICDVIKQIGSHHKGL 507
E+A Q + ++ + KGL
Sbjct: 84 ELAIQTAEEFSRLMKYKKGL 103
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/88 (34%), Positives = 49/88 (55%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
+G +V + GG + + K V +V+G+PGR+ I ++L V +F+LDE D++
Sbjct: 101 KGLNVVPIYGGQPIERQLRALKGTVQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQM 160
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSAT 761
++ F DI IF P +Q I+ SAT
Sbjct: 161 LDMGFREDIEDIFRDTPKDRQTILFSAT 188
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/82 (37%), Positives = 48/82 (58%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
V+GG S+ +DI + VH++VG+PGR+ L+ LS + V DE DKL++ F
Sbjct: 210 VVGGTSMQDDIIRVSNGVHVMVGTPGRIVDLVEKRVGTLSKRVILVFDEADKLLDVTFGE 269
Query: 699 DINYIFSALPNHKQVIMSSATF 764
+ + LP KQ+++ SATF
Sbjct: 270 TVTKLLDLLPREKQMLLYSATF 291
Score = 53.6 bits (123), Expect = 5e-06
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTR 447
G+ PSP+Q+ +P G +LL+ +K+GTGKT + + L +N + +Q +IL P R
Sbjct: 127 GYDFPSPVQVASIPHVLGGKNLLVRSKNGTGKTASYIVPMLNMINSSELSIQGIILVPIR 186
Query: 448 EIAAQICDVIKQIGSHHKGLMS 513
E+A QI +K++ S G++S
Sbjct: 187 ELALQISRNVKRM-SEGTGVIS 207
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 64.5 bits (150), Expect = 3e-09
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL---NLNNGLQ 423
RG++ G++ P+PIQ +P+ G D++ A++G+GKT F I EKL G +
Sbjct: 51 RGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPMFEKLKTRQAKTGAR 110
Query: 424 VMILTPTREIAAQICDVIKQIGSHHKGLMSKL 519
+IL+PTRE+A Q IK+IG GL S +
Sbjct: 111 ALILSPTRELALQTQRFIKEIG-RFTGLKSSV 141
Score = 59.7 bits (138), Expect = 8e-08
Identities = 27/91 (29%), Positives = 48/91 (52%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G V++GG S++ + I+V +PGR H+ + +NL ++ + DE D+L
Sbjct: 136 GLKSSVILGGDSMDNQFSAIHGNPDIIVATPGRFLHICIEMDMNLKSIEFVIFDEADRLF 195
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATFQNI 773
E F I+ I + LP ++Q ++ SAT +
Sbjct: 196 EMGFGEQIHEIANRLPKNRQTLLFSATLPKV 226
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 64.5 bits (150), Expect = 3e-09
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRL-KHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
V GG S+ K ++ I++ +PGRL HL GN +N+S + VLDE D++++ F
Sbjct: 111 VYGGTSIGVQKNKLEEGADILIATPGRLLDHLFNGN-VNISKTGVLVLDEADRMLDMGFW 169
Query: 696 NDINYIFSALPNHKQVIMSSATFQ 767
D+ I LPN KQ+++ SATF+
Sbjct: 170 PDLQRILRRLPNDKQIMLFSATFE 193
Score = 52.8 bits (121), Expect = 1e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +1
Query: 283 PSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFS---IIALEKLNLNNGLQVMILTPTREI 453
P+P+Q +P G DLL A++GTGKT F I A+++ N +IL PTRE+
Sbjct: 30 PTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPIIQAVQQKKRNGTPHALILVPTREL 89
Query: 454 AAQICDVIKQIGSH 495
A Q+ D + Q H
Sbjct: 90 AQQVFDNLTQYAEH 103
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 64.5 bits (150), Expect = 3e-09
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = +3
Query: 507 DVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL-KHLIVGNHINLSDVQLFVLDECDKLVE 683
++ V+ GG + KK HI++G+PGRL HL G +++S ++ ++DE D+++
Sbjct: 106 NIAVLYGGQNYRIQFNDLKKNPHIIIGTPGRLLDHLSRG--LDISKLKTLIIDEADEMLR 163
Query: 684 KPFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
F+ DI +I +P H+Q + SAT RK KF
Sbjct: 164 MGFIEDIEHIIRYVPTHRQTALFSATLPVSIRKLSYKF 201
Score = 53.2 bits (122), Expect = 7e-06
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNG-LQVMIL 435
L + G+Q P PIQ +PL G DLL A +G+GKT F + L+ +++ +Q +I+
Sbjct: 21 LSNIGYQAPLPIQTQCIPLLLKGCDLLGMAHTGSGKTAAFLLPLLQNIDIKQRFVQGLII 80
Query: 436 TPTREIAAQI 465
PTRE+A QI
Sbjct: 81 VPTRELAIQI 90
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 64.5 bits (150), Expect = 3e-09
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-----NGLQVMIL 435
G+++P+PIQ +PL G DLL EA++GTGKT F++ +EKL+ N ++ ++L
Sbjct: 23 GYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIEKLSKNPIDGYRPVRALVL 82
Query: 436 TPTREIAAQICDVIKQIG 489
PTRE+A Q+ D + G
Sbjct: 83 APTRELAIQVADNTLEYG 100
Score = 54.4 bits (125), Expect = 3e-06
Identities = 28/87 (32%), Positives = 48/87 (55%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G V V GG+ V I + K+ I+V +PGRL L+ I+L ++ VLDE D+++
Sbjct: 104 GMRVISVYGGVPVENQIKRLKRGTDILVATPGRLLDLLRQKAISLEKLEYLVLDEADRML 163
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSAT 761
+ F++ I I + +Q ++ +AT
Sbjct: 164 DLGFIDPIQKIMDYAADDRQTLLFTAT 190
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 64.5 bits (150), Expect = 3e-09
Identities = 28/82 (34%), Positives = 50/82 (60%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
+ GG+ +N + K V ++V PGRL L ++LS V++ VLDE D++++ F++
Sbjct: 113 IFGGVGMNPQVQAMAKGVDVLVACPGRLLDLAGQGSVDLSRVEILVLDEADRMLDMGFIH 172
Query: 699 DINYIFSALPNHKQVIMSSATF 764
D+ + + LP +Q ++ SATF
Sbjct: 173 DVKKVLARLPAKRQNLLFSATF 194
Score = 55.2 bits (127), Expect = 2e-06
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 11/87 (12%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL--------NL 408
R + ++G+ +P+P+Q +P G DL++ A++GTGKT F++ LE+L +
Sbjct: 14 RAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILERLFPGGHPDKSQ 73
Query: 409 NNG---LQVMILTPTREIAAQICDVIK 480
+G +V++LTPTRE+AAQ+ D K
Sbjct: 74 RHGPRQPRVLVLTPTRELAAQVHDSFK 100
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 64.5 bits (150), Expect = 3e-09
Identities = 31/85 (36%), Positives = 48/85 (56%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKP 689
V + GG + I K HI+VG+PGR+ + I+L +V+L VLDE D++++
Sbjct: 104 VTTLCGGQPMGPQIQSLKHSPHIIVGTPGRVMDHVEKRRIDLRNVKLRVLDEADRMLDMG 163
Query: 690 FLNDINYIFSALPNHKQVIMSSATF 764
F +D+ IF P Q ++ SATF
Sbjct: 164 FEDDLRIIFGQTPKQVQTLLFSATF 188
Score = 60.1 bits (139), Expect = 6e-08
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +1
Query: 250 TRGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQV 426
T+ L S G + SPIQ +P G D++ +A++G+GKT+ F I ALEK+ +N+ Q
Sbjct: 16 TKALDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPALEKIEVNDFSTQA 75
Query: 427 MILTPTREIAAQI 465
++L PTRE+A Q+
Sbjct: 76 IMLCPTRELAEQV 88
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 64.5 bits (150), Expect = 3e-09
Identities = 31/96 (32%), Positives = 54/96 (56%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G V+ ++GG SVN+D K + I++ +PGRL LI NL V++ VLDE D+++
Sbjct: 103 GLKVQSIVGGTSVNKDRNKLHRGTDILIATPGRLLDLIDQKAFNLGSVEVLVLDEADQML 162
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATFQNIARKSI 788
+ F++ + I +P +Q + SAT ++ +
Sbjct: 163 DLGFVHALRRISQLVPKERQTLFFSATMPKAIKELV 198
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-NLNNGL-----QVMI 432
G+ P+PIQ +P G DLL A++GTGKT F + ++++L +N + ++++
Sbjct: 21 GYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDRLREADNRIPFKSCRMLV 80
Query: 433 LTPTREIAAQICDVIKQIGS 492
L PTRE+ +QI K G+
Sbjct: 81 LAPTRELVSQIAASAKDYGA 100
>UniRef50_Q7PDQ7 Cluster: Similar ATP-dependent RNA Helicase; n=2;
Plasmodium (Vinckeia)|Rep: Similar ATP-dependent RNA
Helicase - Plasmodium yoelii yoelii
Length = 1140
Score = 64.5 bits (150), Expect = 3e-09
Identities = 28/87 (32%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKP 689
+ +++GG+S+ + K+ + I++ +PGR +++ +NL V++ V+DE D+L+E
Sbjct: 247 INIIIGGISLCKQFEILKENIDILICTPGRFSYILDETKLNLEKVEIIVIDEADRLLELN 306
Query: 690 FLNDINYIFSALPN---HKQVIMSSAT 761
+ ND+N I+ + N +KQ I+ SAT
Sbjct: 307 YYNDMNNIYKCIGNKNLNKQTILVSAT 333
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 64.5 bits (150), Expect = 3e-09
Identities = 28/75 (37%), Positives = 49/75 (65%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMI 432
+ + + GF+KPS IQ +P G ++++++KSGTGKT+ ++ L + QVM+
Sbjct: 64 KAIYNQGFEKPSLIQKSAIPHILRGHNVVVQSKSGTGKTIAYTCGVLGNTKIGERTQVMV 123
Query: 433 LTPTREIAAQICDVI 477
+TPTRE++ Q+ +VI
Sbjct: 124 VTPTRELSTQVTEVI 138
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = +3
Query: 576 IVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLNDINYIFSALPNHKQVIMSS 755
+VVGSPG + L+ +N V++ VLDE D L++K + + L + Q+I S
Sbjct: 165 VVVGSPGTILKLMELGKLNYKGVKMIVLDEADILLDKDMMGTQTFRILKLISGAQMIFFS 224
Query: 756 ATFQNIARKSI 788
ATF +++I
Sbjct: 225 ATFSEQVKQTI 235
>UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase DBP4 -
Chaetomium globosum (Soil fungus)
Length = 825
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-----NLNNGL 420
GL +S F+ + +Q +PL G D+L AK+G+GKT+ F + LEKL +GL
Sbjct: 67 GLRASHFEVLTDVQRAAIPLALKGRDILGAAKTGSGKTLAFLVPVLEKLYHAKWTEYDGL 126
Query: 421 QVMILTPTREIAAQICDVIKQIGSHH 498
+I++PTRE+A QI +V+++IG +H
Sbjct: 127 GALIISPTRELAVQIFEVLRKIGRNH 152
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/83 (31%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGR-LKHLIVGNHINLSDVQLFVLDECDKLVEKPF 692
+V+GG S+ E+ + + ++I+V +PGR L+HL + +++++Q+ VLDE D++++ F
Sbjct: 158 LVIGGKSLKEEAERLGR-MNILVCTPGRMLQHLDQTANFDVNNLQILVLDEADRIMDMGF 216
Query: 693 LNDINYIFSALPNHKQVIMSSAT 761
+ ++ + LP +Q ++ SAT
Sbjct: 217 QSAVDALVEHLPTTRQTLLFSAT 239
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 64.1 bits (149), Expect = 4e-09
Identities = 28/82 (34%), Positives = 48/82 (58%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
+ +GG+ + + + V ++V +PGRL L+ N + L V+ VLDE D++++ F+
Sbjct: 122 LAIGGVPMGRQVRSLMQGVEVLVATPGRLLDLVQSNGLKLGSVEFLVLDEADRMLDMGFI 181
Query: 696 NDINYIFSALPNHKQVIMSSAT 761
NDI I + LP +Q + SAT
Sbjct: 182 NDIRKIVAKLPIKRQTLFFSAT 203
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN------N 414
R L + P+PIQ +P G D++ A++GTGKT F++ L +L +
Sbjct: 29 RALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTASFALPILHRLLEHRIKPQPK 88
Query: 415 GLQVMILTPTREIAAQICDVIKQIGSH 495
+V++L+PTRE++ QI D G H
Sbjct: 89 TTRVLVLSPTRELSGQILDSFNAYGRH 115
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 64.1 bits (149), Expect = 4e-09
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTR 447
G++ PSPIQ +P G DLL EA++GTGKT F++ L++L+L QV++L PTR
Sbjct: 63 GYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLLDRLDLAVKNPQVLVLAPTR 122
Query: 448 EIAAQICDVIKQIGSHHKG 504
E+A Q+ + ++ + G
Sbjct: 123 ELAIQVAEAFQRYAKNLPG 141
Score = 60.9 bits (141), Expect = 4e-08
Identities = 29/94 (30%), Positives = 50/94 (53%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G V V GG S+ + + + H++VG+PGR+ I +NL + VLDE D+++
Sbjct: 141 GFHVLPVYGGQSMVVQLRQLARGAHVIVGTPGRVMDHIERKSLNLDSLTTLVLDEADEML 200
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATFQNIARK 782
F++D+ +I P +Q + SAT + R+
Sbjct: 201 RMGFIDDVEWILQHTPAERQTALFSATMPDAIRR 234
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 64.1 bits (149), Expect = 4e-09
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMIL 435
++S GF + IQ +P G D+L EA++GTGKT F + AL K++ + Q+M+L
Sbjct: 30 VLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAKIDTSIKKPQLMVL 89
Query: 436 TPTREIAAQICDVIKQIGSHHKGL 507
PTRE+A Q+ + I+ G KGL
Sbjct: 90 APTRELAMQVAEAIESFGKDMKGL 113
Score = 60.5 bits (140), Expect = 5e-08
Identities = 31/100 (31%), Positives = 52/100 (52%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
+G V + GG S + ++ +VVG+PGRL + + L ++++ VLDE D++
Sbjct: 111 KGLRVATLYGGQSYGPQFQQLERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEM 170
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
+ FL DI +I +P Q+ + SAT RK +F
Sbjct: 171 LNMGFLEDIQWILDHIPKTAQMCLFSATMPPAIRKIANRF 210
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 64.1 bits (149), Expect = 4e-09
Identities = 35/92 (38%), Positives = 51/92 (55%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
+ G S+ + IA+ K++VHIVV +PGR+ I I L +V+ V+DE DK+ K F+
Sbjct: 105 IFGKQSIKDQIAELKQRVHIVVATPGRILDHINRGSIKLENVKYLVIDEADKMFNKGFVE 164
Query: 699 DINYIFSALPNHKQVIMSSATFQNIARKSICK 794
+ I LP K V + SAT K IC+
Sbjct: 165 QMEKILLNLPKEKIVSLFSATIDE-EIKYICE 195
Score = 60.5 bits (140), Expect = 5e-08
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVM 429
+ L S G+ PS +Q +P G +L++ +K+G+GKT F+I E +N++ N +Q +
Sbjct: 16 KSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCENINVDYNNIQAL 75
Query: 430 ILTPTREIAAQICDVIKQIG 489
I+ PTRE+A Q+ D I IG
Sbjct: 76 IVVPTRELALQVKDEISDIG 95
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 64.1 bits (149), Expect = 4e-09
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 5/98 (5%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGR-LKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
V GG+S+ I K++V +VVG+PGR + HL G ++++ ++ V+DE D++++ F+
Sbjct: 105 VYGGVSIGNQIRALKRRVDLVVGTPGRIIDHLNRGT-LDITKIKYLVIDEADEMLDMGFI 163
Query: 696 NDINYIFSALPNHKQVIMSSATFQ----NIARKSICKF 797
D+ I S KQ++M SAT +ARK + F
Sbjct: 164 EDVEMILSKTNKEKQILMFSATMPQRIVTLARKHMGNF 201
Score = 60.9 bits (141), Expect = 4e-08
Identities = 30/74 (40%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLL-EAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPT 444
G++ P+PIQ +PL G + ++ +A++GTGKT F I +E+L+ N +Q ++LTPT
Sbjct: 21 GYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIERLDEKANDVQALVLTPT 80
Query: 445 REIAAQICDVIKQI 486
RE+A Q+C+ I +
Sbjct: 81 RELALQVCNEIDSL 94
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 64.1 bits (149), Expect = 4e-09
Identities = 33/81 (40%), Positives = 49/81 (60%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
V GG+S+ K V I+V +PGRL L + +I+LS +++FVLDE D +++ F+N
Sbjct: 109 VFGGVSLEPQKEILAKGVDILVATPGRLIDLQMQGNIDLSQLEIFVLDEADLMLDMGFIN 168
Query: 699 DINYIFSALPNHKQVIMSSAT 761
DI I P KQ ++ SAT
Sbjct: 169 DIKKIEKLCPRKKQTLLFSAT 189
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/88 (27%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI----IALEKLNLNNG- 417
+ + + F KP+ +Q +PL ++++ A++GTGKT F++ + +K + G
Sbjct: 14 KAIAEARFHKPTLVQEKTIPLVLDKKNVIVAAQTGTGKTAAFALPIINLLFDKQDAEKGE 73
Query: 418 --LQVMILTPTREIAAQICDVIKQIGSH 495
++ +++TPTRE+A QI + K +
Sbjct: 74 KKIKALVITPTRELAIQILENFKSYSKY 101
>UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Actinomycetales|Rep: DEAD/DEAH box helicase domain
protein - Arthrobacter sp. (strain FB24)
Length = 585
Score = 64.1 bits (149), Expect = 4e-09
Identities = 29/93 (31%), Positives = 53/93 (56%)
Frame = +3
Query: 483 NRITPQGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLD 662
N + + + + GG + + +K V IVVG+PGRL L H++L +V++ +LD
Sbjct: 137 NAARKRNARIATIYGGRAYEPQVDSLQKGVEIVVGTPGRLIDLYKQKHLSLKNVKIVILD 196
Query: 663 ECDKLVEKPFLNDINYIFSALPNHKQVIMSSAT 761
E D++++ FL D+ + + P +Q ++ SAT
Sbjct: 197 EADEMLDLGFLPDVETLIAGTPAVRQTLLFSAT 229
Score = 50.8 bits (116), Expect = 4e-05
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 11/80 (13%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL-----------EKLN 405
L +G P PIQ +P+ G D++ +AK+GTGKT+ F I AL +KL
Sbjct: 52 LADAGITHPFPIQAMTLPVALAGHDIIGQAKTGTGKTLGFGIPALQRVVGRDDPGFDKLA 111
Query: 406 LNNGLQVMILTPTREIAAQI 465
+ Q +++ PTRE+A Q+
Sbjct: 112 VPGAPQALVIVPTRELAVQV 131
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 64.1 bits (149), Expect = 4e-09
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPL--GKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGL-Q 423
+G+ + GF KPS IQ +PL G C +++ +AK+G+GKT F++ L K+N+N L Q
Sbjct: 112 KGIQNMGFAKPSKIQQCALPLILGSCT-NIIAQAKNGSGKTATFALAMLSKVNVNVPLVQ 170
Query: 424 VMILTPTREIAAQICDVIKQIG 489
+ + PTRE+A Q VI+++G
Sbjct: 171 ALCICPTRELATQNVQVIQKLG 192
Score = 35.9 bits (79), Expect = 1.2
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 573 HIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV--EKPFLNDINYIFSALPNHKQVI 746
H+ VG+PG+ + +N+++V + VLDE D+L+ + + I + Q++
Sbjct: 216 HLYVGTPGKTMDFLKKRIMNVTNVVMLVLDEADELINQQNNMGPQVLQIRNFFRGPVQIV 275
Query: 747 MSSATFQN 770
+ SATF +
Sbjct: 276 LFSATFSD 283
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 64.1 bits (149), Expect = 4e-09
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = +3
Query: 522 MGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLND 701
+GG S+ E K+ VH+VV +PGRL L+ I L + VLDE D++++ F D
Sbjct: 164 IGGSSIKEQSDAMKRGVHMVVATPGRLMDLLDKRIITLDVCRYLVLDEADRMIDMGFEED 223
Query: 702 INYIFSALPNHKQVIMSSAT----FQNIARKSICK 794
+ IFS + +Q ++ SAT QN A+ ++ K
Sbjct: 224 VRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVK 258
Score = 46.4 bits (105), Expect = 8e-04
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI----IALEK-----LNLN 411
L G P+PIQ+ G+P G D++ A +G+GKT+VF++ +LE+ N
Sbjct: 62 LKKKGITHPTPIQVQGLPAVLTGRDMIGIAFTGSGKTLVFTLPIIMFSLEQEKAMPFQRN 121
Query: 412 NGLQVMILTPTREIAAQICDVI 477
G MI+ P+RE+A Q +VI
Sbjct: 122 EGPYGMIVVPSRELARQTFEVI 143
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 64.1 bits (149), Expect = 4e-09
Identities = 30/77 (38%), Positives = 49/77 (63%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILTPTRE 450
GF+K PIQ +P+ G D++ +A +GTGKT +SI L+++ G+Q +I+ PTRE
Sbjct: 21 GFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQEIKEGGGIQGLIVAPTRE 80
Query: 451 IAAQICDVIKQIGSHHK 501
+A QI + +K+ + K
Sbjct: 81 LAVQITEEVKKFAKYTK 97
Score = 52.8 bits (121), Expect = 1e-05
Identities = 27/81 (33%), Positives = 44/81 (54%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
+ GG S+ + K+ I+V +PGRL I I++ V VLDE D +++ F++
Sbjct: 103 IYGGQSMGVQLDALKRGAEILVATPGRLIDHIKRGSISIDRVTHLVLDEADTMLDMGFID 162
Query: 699 DINYIFSALPNHKQVIMSSAT 761
DI +I P+ K + + SAT
Sbjct: 163 DIQFILDLTPDEKVMSLFSAT 183
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL------NN 414
R L +G+ KP+PIQ +PL G DLL A++GTGKT F++ L +L N
Sbjct: 20 RALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALPLLHRLAATPRPAPKN 79
Query: 415 GLQVMILTPTREIAAQICDVIKQIGSH 495
G +V++L PTRE+ +QI D + H
Sbjct: 80 GARVLVLAPTRELVSQIADGFESFSRH 106
Score = 56.4 bits (130), Expect = 8e-07
Identities = 28/84 (33%), Positives = 46/84 (54%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKP 689
V + GG+S + ++ V I+V +PGRL LI +LS ++ VLDE D++++
Sbjct: 111 VTTIFGGVSQVHQVKALEEGVDIIVAAPGRLLDLIEQGLCDLSQLETLVLDEADQMLDMG 170
Query: 690 FLNDINYIFSALPNHKQVIMSSAT 761
F I I + LP + ++ SAT
Sbjct: 171 FAKPIERIVATLPEDRHTVLFSAT 194
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 63.7 bits (148), Expect = 5e-09
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGL-QVMIL 435
L G+ PSPIQ P G DL+ +A++GTGKT F++ LE+L QV++L
Sbjct: 86 LADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLERLESGQKTPQVLVL 145
Query: 436 TPTREIAAQICDVIKQIGSHHKGL 507
PTRE+A Q+ D K + H L
Sbjct: 146 APTRELAMQVADSFKAYAAGHPHL 169
Score = 60.1 bits (139), Expect = 6e-08
Identities = 28/84 (33%), Positives = 48/84 (57%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKP 689
V V GG I+ ++ V +VVG+PGR+ + ++ S + VLDE D+++
Sbjct: 171 VLAVYGGTDFRSQISTLRRGVDVVVGTPGRVMDHMRQGTLDTSGLTSLVLDEADEMLRMG 230
Query: 690 FLNDINYIFSALPNHKQVIMSSAT 761
F++D+ +I LP +QV++ SAT
Sbjct: 231 FIDDVEWILEQLPKERQVVLFSAT 254
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 63.7 bits (148), Expect = 5e-09
Identities = 32/82 (39%), Positives = 47/82 (57%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
+VMGG S I + +VV +PGRL+ + ++LS V++ VLDE D++++ FL
Sbjct: 129 LVMGGTSERNQIQSIRSGARVVVATPGRLEDYMGRRLVDLSQVEMLVLDEADRMMDMGFL 188
Query: 696 NDINYIFSALPNHKQVIMSSAT 761
I I ALP KQ + SAT
Sbjct: 189 PAIKRILRALPRDKQTLCFSAT 210
Score = 62.1 bits (144), Expect = 2e-08
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN--GLQVMI 432
L ++ F P+P+Q +P G D+L A++GTGKT+ F I ALE L G+QV+I
Sbjct: 42 LEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKTLAFIIPALEMLRDTEPCGVQVLI 101
Query: 433 LTPTREIAAQICDVIKQI 486
L PTRE+A Q+ V +Q+
Sbjct: 102 LVPTRELAMQVHGVYEQL 119
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 63.7 bits (148), Expect = 5e-09
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL----NLNNGL 420
R L + G+++P+PIQ VP G DLL +A +GTGKT F++ L +L ++G
Sbjct: 70 RSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKTAAFALPLLHRLTDDRTGDHGP 129
Query: 421 QVMILTPTREIAAQICDVIKQIG 489
Q ++L PTRE+A Q+ + I + G
Sbjct: 130 QALVLVPTRELAVQVSEAIHRYG 152
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGR-LKHLIVGNHINLSDVQLFVLDECDKL 677
G+ V V GG + + + V +VV +PGR L H+ G + L + VLDE D++
Sbjct: 156 GARVLPVYGGAPIGRQVRALVQGVDVVVATPGRALDHMGRGT-LRLDGLHTVVLDEADEM 214
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSAT 761
++ F DI+ I P +Q ++ SAT
Sbjct: 215 LDMGFAEDIDAILEQAPQKRQTVLFSAT 242
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 63.7 bits (148), Expect = 5e-09
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL--NLNNGLQV 426
RG+ + G+ P+P+QL +P+ G DL+ A++GTGKT F++ L +L + G +V
Sbjct: 14 RGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQTGTGKTAAFALPVLARLGGHRPGGPRV 73
Query: 427 MILTPTREIAAQICDVIKQIG 489
++L PTRE+ AQ+ + G
Sbjct: 74 LVLEPTRELGAQVETAFRDFG 94
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/82 (29%), Positives = 43/82 (52%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
++ GG+ + + + IV+ + GRL I I L V++ +LDE D++++ F+
Sbjct: 103 IIHGGVGYGKQRSDLRAGTDIVIATVGRLMDFIKEKEIRLDSVEVLILDEVDRMLDMGFI 162
Query: 696 NDINYIFSALPNHKQVIMSSAT 761
ND+ I P +Q + SAT
Sbjct: 163 NDVKRIVGLCPKQRQTLFFSAT 184
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 63.7 bits (148), Expect = 5e-09
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL---NLNNGLQ 423
+ ++ G++ P+PIQ +PL G D++ AK+G+GKT F I EKL + +G +
Sbjct: 51 KAILKMGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTGCFLIPLFEKLKQREIKSGAR 110
Query: 424 VMILTPTREIAAQICDVIKQIG 489
++LTPTRE+A Q IKQ+G
Sbjct: 111 ALVLTPTRELAIQTFKFIKQLG 132
Score = 57.2 bits (132), Expect = 4e-07
Identities = 30/86 (34%), Positives = 44/86 (51%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
+V+GG S++ A I+V +PGR HL V + LS VQ V DE D+L E F
Sbjct: 141 LVLGGDSMDSQFAAIHTLPDIIVATPGRFLHLCVEMDLKLSSVQYCVFDEADRLFEMGFG 200
Query: 696 NDINYIFSALPNHKQVIMSSATFQNI 773
+ LP +Q+++ SAT +
Sbjct: 201 EQLTETLRRLPEARQMVLFSATLPKL 226
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 63.7 bits (148), Expect = 5e-09
Identities = 29/85 (34%), Positives = 51/85 (60%)
Frame = +3
Query: 507 DVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEK 686
DV V GG ++ I +K V I++G+PGR+ I ++L++++ +LDE D++++
Sbjct: 103 DVLPVYGGQPIDRQIKALQKGVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDM 162
Query: 687 PFLNDINYIFSALPNHKQVIMSSAT 761
F DI YI +P +Q ++ SAT
Sbjct: 163 GFREDIEYILEDIPYERQFLLFSAT 187
Score = 58.4 bits (135), Expect = 2e-07
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL-NNGLQVM 429
+ + GF++ SPIQ +P D+ +A++GTGKT F I LE ++ +N LQ +
Sbjct: 17 KAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLENIDSEDNNLQAI 76
Query: 430 ILTPTREIAAQICDVIKQI 486
IL PTRE+A Q+ + ++++
Sbjct: 77 ILCPTRELAIQVAEELRKL 95
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 63.7 bits (148), Expect = 5e-09
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVMILTPTR 447
G+++P+PIQ +PL G D+ +A +GTGKT F I A+E N +Q ++L P+R
Sbjct: 23 GYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPAIELCQPANRNVQTIVLCPSR 82
Query: 448 EIAAQICDVIKQIGSHHKGL 507
E+A Q+ + ++ H KG+
Sbjct: 83 ELAVQVGTELNKLAMHKKGI 102
Score = 61.3 bits (142), Expect = 3e-08
Identities = 31/89 (34%), Positives = 48/89 (53%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
+G + V GG + I + V I++G+PGR+ I + L V L VLDE D++
Sbjct: 100 KGISILPVYGGQPIERQIKALSRGVQIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQM 159
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSATF 764
++ F DI I S +P +Q ++ SATF
Sbjct: 160 LDMGFREDIEEILSHIPKERQTVILSATF 188
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 63.7 bits (148), Expect = 5e-09
Identities = 31/85 (36%), Positives = 53/85 (62%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMI 432
R + F++P+ IQ +PL G D++ A +G+GKT+ F ++K+ NG++ ++
Sbjct: 15 RSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGIIQKIEKGNGIRALV 74
Query: 433 LTPTREIAAQICDVIKQIGSHHKGL 507
LTPTRE+A Q+ + +K+ S HK L
Sbjct: 75 LTPTRELAEQVQNSLKEF-SRHKQL 98
Score = 63.3 bits (147), Expect = 7e-09
Identities = 30/84 (35%), Positives = 52/84 (61%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKP 689
V + GG+++N I + ++ +VV +PGRL I I+L DV++ VLDE D++++
Sbjct: 100 VAPIYGGVAINPQIRQLER-ADVVVATPGRLLDHIERGTIDLGDVEILVLDEADRMLDMG 158
Query: 690 FLNDINYIFSALPNHKQVIMSSAT 761
F++D+ I P+ +Q +M SAT
Sbjct: 159 FIDDVEEIIDECPSDRQTMMFSAT 182
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 63.7 bits (148), Expect = 5e-09
Identities = 32/97 (32%), Positives = 52/97 (53%)
Frame = +3
Query: 507 DVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEK 686
D + GG + + + + V + VG+PGR+ L+ +NLS+VQ VLDE D++++
Sbjct: 206 DTICLYGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQV 265
Query: 687 PFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
F D+ I LP +Q +M SAT + R K+
Sbjct: 266 GFAEDVEIILEKLPEKRQSMMFSATMPSWIRSLTKKY 302
Score = 43.2 bits (97), Expect = 0.008
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL---NLNNGL- 420
+ L S G +K PIQ + G D++ A++GTGKT+ F I ++K+ N +G
Sbjct: 117 KALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKHGRG 176
Query: 421 ---QVMILTPTREIAAQI 465
++L PTRE+A Q+
Sbjct: 177 RNPLCLVLAPTRELARQV 194
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 63.7 bits (148), Expect = 5e-09
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = +3
Query: 498 QGSDVE--VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECD 671
+G+D+ ++GG+S+ E + K IVV +PGR HL V + LS ++ V DE D
Sbjct: 164 KGTDLRSVAIVGGVSLEEQFSLLSGKPDIVVATPGRFLHLKVEMKLELSSIEYVVFDEAD 223
Query: 672 KLVEKPFLNDINYIFSALPNHKQVIMSSAT 761
+L E F + I ALP +Q ++ SAT
Sbjct: 224 RLFEMGFAAQLTEILHALPTSRQTLLFSAT 253
Score = 56.0 bits (129), Expect = 1e-06
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN---LNNGLQ 423
R + GF+ P+PIQ +PL G D++ A++G+GKT F I +E L N+ +
Sbjct: 82 RAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEHLKSTLANSNTR 141
Query: 424 VMILTPTREIAAQICDVIK 480
+IL+P RE+A Q V+K
Sbjct: 142 ALILSPNRELALQTVKVVK 160
>UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=13;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 412
Score = 63.3 bits (147), Expect = 7e-09
Identities = 30/72 (41%), Positives = 45/72 (62%)
Frame = +1
Query: 274 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILTPTREI 453
F+KP+ IQ +P G DLL A +G+GKT+ + + LEKL +N + +IL P RE+
Sbjct: 20 FKKPTDIQALAIPELLAGQDLLALANTGSGKTLAYGLPLLEKLGVNPEQKALILVPIREL 79
Query: 454 AAQICDVIKQIG 489
A Q+ + I Q+G
Sbjct: 80 ATQVSEAINQVG 91
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/90 (32%), Positives = 46/90 (51%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G + + GG+ + + HI+V + GRL L N ++LS++ VLDE D+L+
Sbjct: 95 GLNAVCLCGGVDKEQQLQALATNPHILVATTGRLVDL-ANNGLDLSNIHYLVLDEADRLL 153
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATFQN 770
F D+ I + N +Q M SATF +
Sbjct: 154 NMGFWPDVQNIAGQISNQRQTAMFSATFSD 183
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 63.3 bits (147), Expect = 7e-09
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Frame = +3
Query: 498 QGSDVEV--VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECD 671
Q D+ V + GG V + + K K HIVV +PGRL I I+LS++ VLDE D
Sbjct: 99 QREDINVLAIYGGQDVAQQLRKLKGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEAD 158
Query: 672 KLVEKPFLNDINYIFSALPNHKQVIMSSATFQNIARK 782
+++ FL DI I P KQ ++ SAT +K
Sbjct: 159 QMLYFGFLYDIEDILDETPGSKQTMLFSATIPKDIKK 195
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/81 (37%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +1
Query: 247 YTRGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN-LNNGLQ 423
+ L +G + +PIQ +P+ G D++ +AK+GTGKT+ F + LEK++ ++ +Q
Sbjct: 16 FNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQ 75
Query: 424 VMILTPTREIAAQICDVIKQI 486
+I+ PTRE+A QI IK++
Sbjct: 76 ALIVAPTRELALQITTEIKKM 96
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 63.3 bits (147), Expect = 7e-09
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL---NLNNGLQ 423
+ L G+ P+PIQ +P+ G DLL A++GTGKT FSI L+KL + G++
Sbjct: 14 KALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQKLYKTDHRKGIK 73
Query: 424 VMILTPTREIAAQICDVIKQIGSH 495
++LTPTRE+A QI + + G +
Sbjct: 74 ALVLTPTRELAIQIGESFEAYGRY 97
Score = 62.9 bits (146), Expect = 9e-09
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
V+ GG+ + + I+V +PGRL LI I+LS + FVLDE D++++ F+
Sbjct: 104 VIFGGVGQKPQTDALRSGIQILVATPGRLLDLISQGFISLSSLDFFVLDEADRMLDMGFI 163
Query: 696 NDINYIFSALPNHKQVIMSSAT 761
+DI I LP +Q + SAT
Sbjct: 164 HDIKRILKLLPARRQTLFFSAT 185
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 63.3 bits (147), Expect = 7e-09
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVP-LGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNG-LQVM 429
GL GF+ P+ IQ +P L K D + A++GTGKT F + L+ +++N+ +Q +
Sbjct: 27 GLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLPLLDLIDVNSREVQAL 86
Query: 430 ILTPTREIAAQICDVIKQIGSH 495
IL PTRE+A QIC ++Q+ H
Sbjct: 87 ILAPTRELAQQICGQMEQMSKH 108
Score = 53.2 bits (122), Expect = 7e-06
Identities = 26/85 (30%), Positives = 45/85 (52%)
Frame = +3
Query: 507 DVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEK 686
+V V GG ++ I ++ I+V +PGRL L+ + L ++ VLDE D+++
Sbjct: 113 NVVPVFGGANIMNQIRDIRRGAQIIVATPGRLMDLMKRREVKLDALKYMVLDEADEMLNM 172
Query: 687 PFLNDINYIFSALPNHKQVIMSSAT 761
F DI++I S + + + SAT
Sbjct: 173 GFKEDIDFILSKSDTGRNIWLFSAT 197
>UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase
DbpA; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Similar to ATP-independent RNA helicase DbpA -
Candidatus Kuenenia stuttgartiensis
Length = 407
Score = 63.3 bits (147), Expect = 7e-09
Identities = 31/88 (35%), Positives = 52/88 (59%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
V GG IA+ K+ VHI+V +PGRL L+ ++ + ++ +LDE D+L++ FL
Sbjct: 103 VYGGFDRAAQIARVKQTVHILVATPGRLIDLLYEGILSFARIKCVILDEADELLKVGFLE 162
Query: 699 DINYIFSALPNHKQVIMSSATFQNIARK 782
DI +I S + + Q ++ SAT + +K
Sbjct: 163 DIEFILSCIRHKHQTLLFSATMPDDIKK 190
Score = 47.2 bits (107), Expect = 5e-04
Identities = 24/81 (29%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVM 429
+ L G+ + +PIQ P+ G DL A++G+GKT +I ++K++ + + +Q +
Sbjct: 14 KALDKMGYNEMTPIQEATYPIIFAGHDLCALAETGSGKTAACAIPLIQKVDPSLDAIQGL 73
Query: 430 ILTPTREIAAQICDVIKQIGS 492
++ PTRE+ Q + I++I +
Sbjct: 74 VIVPTRELCMQYVEEIRKIAA 94
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 63.3 bits (147), Expect = 7e-09
Identities = 32/82 (39%), Positives = 50/82 (60%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
V+ GG+ K +K + I+V +PGRL LI I+LS V+ FVLDE D++++ L
Sbjct: 108 VIFGGVGQAPQTRKLEKGIDILVATPGRLLDLINQGFIDLSHVEHFVLDETDQMLDMGML 167
Query: 696 NDINYIFSALPNHKQVIMSSAT 761
+D+ I + LP +Q ++ SAT
Sbjct: 168 HDVKRIITYLPRERQNMLFSAT 189
Score = 55.2 bits (127), Expect = 2e-06
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGL---- 420
+ L + G+ + +PIQ +P G DLL A++GTGKT F+I L+ L + GL
Sbjct: 14 KALAAQGYSEATPIQAEAIPHLLEGLDLLGCAQTGTGKTAAFAIPILQSLAMGQGLLKGK 73
Query: 421 ---QVMILTPTREIAAQICDVIKQIG 489
+ ++L PTRE+A QI + G
Sbjct: 74 RQIRALVLAPTRELATQIAESFTAYG 99
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 63.3 bits (147), Expect = 7e-09
Identities = 33/103 (32%), Positives = 54/103 (52%)
Frame = +3
Query: 489 ITPQGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDEC 668
IT D V GG + + +K ++ V IVVG+PGR+ L+ ++LS+++ VLDE
Sbjct: 123 ITAPTLDTACVYGGTPIGQQESKLRRGVDIVVGTPGRIMDLMNRRALDLSEIEFVVLDEA 182
Query: 669 DKLVEKPFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
D+++ F D+ I P +Q + SAT ++ KF
Sbjct: 183 DQMLNVGFEEDVEAILHDCPAGRQTFLFSATMPQWVKQITKKF 225
Score = 38.7 bits (86), Expect = 0.17
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 10/69 (14%)
Frame = +1
Query: 289 PIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGL----------QVMILT 438
PIQ + G D++ A++GTGKT+ FS+ +EKL L+NG + ++L
Sbjct: 50 PIQQAVLRPAMDGQDVVGRARTGTGKTLAFSLPVIEKL-LSNGRGSGGRGYRNPKCIVLA 108
Query: 439 PTREIAAQI 465
PTRE+A Q+
Sbjct: 109 PTRELAKQV 117
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 63.3 bits (147), Expect = 7e-09
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN----NGL 420
RGL S GF KP+PIQ +P+ G D++ A +G+GKT F + LE+L
Sbjct: 289 RGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTT 348
Query: 421 QVMILTPTREIAAQICDVIKQIGSH 495
+V++LTPTRE+A Q V ++ SH
Sbjct: 349 RVVVLTPTRELAIQCHSVATKLASH 373
Score = 56.4 bits (130), Expect = 8e-07
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGR-LKHLIVGNHINLSDVQLFVLDECDKLVEKPF 692
+ +GGLS+ + + + +V+ +PGR + H+ + V++ VLDE D+++E F
Sbjct: 380 LAVGGLSLKVQEGELRLRPDVVIATPGRFIDHMRNSASFAVETVEILVLDEADRMLEDGF 439
Query: 693 LNDINYIFSALPNHKQVIMSSATFQNIARKSI 788
+++N I + LP +Q ++ SAT + K I
Sbjct: 440 ADELNEILTTLPKSRQTMLFSATMTSTVDKLI 471
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 63.3 bits (147), Expect = 7e-09
Identities = 30/100 (30%), Positives = 55/100 (55%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
QG+ + + GG + + K+ +VVG+PGR+ I +NLS+++ VLDE D++
Sbjct: 101 QGTRIVTLYGGQRYDIQLRALKQGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEM 160
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
+ F++D+ + + LP + Q + SAT R+ +F
Sbjct: 161 LRMGFIDDVETVMAELPENHQTALFSATMPEPIRRITKRF 200
Score = 52.0 bits (119), Expect = 2e-05
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVMILTPTR 447
GF+ PSPIQ +P G D+L A++G+GKT F++ L +++ Q++++ PTR
Sbjct: 24 GFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLAQIDPSEKHPQMLVMAPTR 83
Query: 448 EIAAQICDVIKQIGSHHKG 504
E+A Q+ D + + +G
Sbjct: 84 ELAIQVADACELFVKYAQG 102
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 63.3 bits (147), Expect = 7e-09
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
+ MGGL V+E + + VHIVV +PGRL ++ + L + +DE D++++ F
Sbjct: 292 LAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFE 351
Query: 696 NDINYIFSALPNHKQVIMSSAT----FQNIARKSICK 794
D+ IFS +Q ++ SAT QN AR ++ K
Sbjct: 352 EDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVK 388
Score = 53.6 bits (123), Expect = 5e-06
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI----IALEK-----LNL 408
GL + G + P+PIQ+ G+P G DL+ A +G+GKT+VF + ALE+
Sbjct: 191 GLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFER 250
Query: 409 NNGLQVMILTPTREIAAQICDVIKQIGSH 495
N G +I+ P+RE+A Q ++I+ H
Sbjct: 251 NEGPYGLIICPSRELAKQTHEIIQHYSKH 279
>UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 419
Score = 62.9 bits (146), Expect = 9e-09
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Frame = +3
Query: 501 GSDVEVV--MGGLSVNEDIAKFK-KKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECD 671
G D++ +GG + D+ K +K I+VG+PGRL L ++LS + FV+DECD
Sbjct: 133 GKDIQTASYIGGNPESNDVDDLKNRKPTIIVGTPGRLASLNNSGALDLSKLDTFVIDECD 192
Query: 672 KLVEKPFLNDINYIFSALPNHKQVIMSSATFQNIARKSICK 794
K++ DI +F + +KQV+M SAT K++C+
Sbjct: 193 KILSSKSELDIMSLFMSSSKNKQVMMFSATISE-QNKALCR 232
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK-LNLNNGLQVM 429
+ + GF+ PS +Q +P D+L +AKSG GKT VF + L + L L + + +
Sbjct: 46 QSITDCGFEHPSEVQSQVIPKALLRQDILCQAKSGMGKTAVFVLSILNQGLFLGDHVSAI 105
Query: 430 ILTPTREIAAQI 465
++ TRE+A Q+
Sbjct: 106 VICHTRELARQV 117
>UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=20; Bacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 436
Score = 62.9 bits (146), Expect = 9e-09
Identities = 28/93 (30%), Positives = 54/93 (58%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
++GG I K KK+ HIVVG+PGR+K L+ + + ++DE D +++ F++
Sbjct: 110 LIGGTDKQRSIEKLKKQPHIVVGTPGRIKDLVEEQALFVHKANTIIVDEADLMLDMGFIH 169
Query: 699 DINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
D++ I + +P + Q+++ SAT + + K+
Sbjct: 170 DVDKIAARMPKNLQMLVFSATIPQKLKPFLKKY 202
Score = 43.2 bits (97), Expect = 0.008
Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +1
Query: 274 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNG-LQVMILTPTRE 450
F +P+ IQ P+ K G ++ ++++G+GKT + + L ++N +Q++I PTRE
Sbjct: 24 FTEPTGIQQKIFPVVKKGVSVIGQSQTGSGKTHAYLLPTLNRINPGREEVQLVITAPTRE 83
Query: 451 IAAQICDVIKQI 486
+A QI + I ++
Sbjct: 84 LAQQIYEEIVKL 95
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 62.9 bits (146), Expect = 9e-09
Identities = 31/87 (35%), Positives = 48/87 (55%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G +VV GG+ + + + I+V +PGRL LI IN +++FVLDE D ++
Sbjct: 103 GLKTKVVYGGVGRQAQVDSIELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTML 162
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSAT 761
+ F D+ I S LP +Q ++ SAT
Sbjct: 163 DMGFFKDVQSIISKLPKSRQTLLFSAT 189
Score = 53.6 bits (123), Expect = 5e-06
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN------NGLQVMI 432
G+++P+PIQ +P G DLL A++GTGKT FS+ + K N + +I
Sbjct: 21 GYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINKFGRNKIDIKAKSTRSLI 80
Query: 433 LTPTREIAAQICDVIKQIGSHHKGLMSKL 519
LTPTRE+A+QI I S GL +K+
Sbjct: 81 LTPTRELASQIMQNIDDY-SDGLGLKTKV 108
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 62.9 bits (146), Expect = 9e-09
Identities = 30/96 (31%), Positives = 55/96 (57%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G V +GGL+ + + +IVV +PGRL + INL+ V++ +LDE D+++
Sbjct: 100 GIRAAVAVGGLNERSQLRDIRGGANIVVATPGRLYDFMSRGLINLTTVRMLILDESDRML 159
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATFQNIARKSI 788
+ FL I I +A+P +Q ++ SAT ++ ++ +
Sbjct: 160 DMGFLPTIKRIIAAMPAERQTLLFSATLESSVKQLV 195
Score = 56.0 bits (129), Expect = 1e-06
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL---NNGLQVM 429
L + F +P+PIQ + G D++ A++GTGKT+ F + ++ L+ G++ +
Sbjct: 17 LAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQLLSTEPRQPGVRAL 76
Query: 430 ILTPTREIAAQICDVIKQI 486
ILTPTRE+A QI + + QI
Sbjct: 77 ILTPTRELALQINEALLQI 95
>UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein;
n=10; Alphaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9)
Length = 793
Score = 62.9 bits (146), Expect = 9e-09
Identities = 28/87 (32%), Positives = 50/87 (57%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G+ + +GG+ + + HIVVG+PGRL+ I ++LS ++ VLDE D+++
Sbjct: 117 GAHIATCVGGMDYRTERRALDRGAHIVVGTPGRLRDHIERGSLDLSGLRAVVLDEADEML 176
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSAT 761
+ F D+ +I + P ++ +M SAT
Sbjct: 177 DLGFREDLEFILGSAPEERRTLMFSAT 203
Score = 38.7 bits (86), Expect = 0.17
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII-------ALEKLNLNNG 417
L + G++ +P+Q + G G D L+ A++G+GKTV F I ++L +
Sbjct: 30 LAAKGYESLTPVQEAVLAEGVAGRDALVSAQTGSGKTVAFGIAIADQILQGADRLLFADT 89
Query: 418 LQVMILTPTREIAAQI 465
+ + PTRE+A Q+
Sbjct: 90 PIALAIAPTRELALQV 105
>UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 750
Score = 62.9 bits (146), Expect = 9e-09
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-----NLNNGL 420
GL S + + IQ +P CG D+L AK+G+GKT+ F I LEKL +G+
Sbjct: 84 GLKKSEYVTMTEIQRASLPHSLCGRDILGAAKTGSGKTLAFLIPVLEKLYRLRWGPEDGV 143
Query: 421 QVMILTPTREIAAQICDVIKQIGSHH 498
+I++PTRE+ Q+ DV+K +G +H
Sbjct: 144 GSIIISPTRELTGQLFDVLKSVGKYH 169
Score = 53.2 bits (122), Expect = 7e-06
Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Frame = +3
Query: 567 KVHIVVGSPGRL-KHLIVGNHINLSDVQLFVLDECDKLVEKPFLNDINYIFSALPNHKQV 743
+++I+V +PGRL +H+ + + S +Q+ VLDE D++++ F +N I S LP H+Q
Sbjct: 192 ELNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKALNAIISQLPKHRQT 251
Query: 744 IMSSAT----FQNIARKSI 788
++ SAT Q++AR S+
Sbjct: 252 LLFSATQTKSVQDLARLSL 270
>UniRef50_Q8IBA2 Cluster: Putative uncharacterized protein
MAL8P1.19; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL8P1.19 - Plasmodium
falciparum (isolate 3D7)
Length = 1289
Score = 62.9 bits (146), Expect = 9e-09
Identities = 28/86 (32%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +3
Query: 507 DVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEK 686
++ +++GG+S+ + + + I++ +PGRL L+ ++L V++ ++DE D+L+E
Sbjct: 261 NINIIIGGVSIIKQFDILNQNLDILLCTPGRLSFLLQETKLSLEKVEILIIDEADRLLEL 320
Query: 687 PFLNDINYIFSALPN-HKQVIMSSAT 761
+ ND+N I+ +L N KQ I+ SAT
Sbjct: 321 NYYNDMNVIYKSLNNTSKQTILVSAT 346
Score = 35.5 bits (78), Expect = 1.6
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +1
Query: 274 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN---GLQVMILTPT 444
+ KP+ IQ + D++ +K+G+GK++V+ ++ L +N G++ +I+ PT
Sbjct: 180 YNKPTNIQKLCITKILHRRDVICISKTGSGKSLVYLCTLIDILKEHNKYYGIRGLIILPT 239
Query: 445 REIAAQICDVIKQI 486
+E+ QI + K+I
Sbjct: 240 KELVIQIYKLCKKI 253
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 62.9 bits (146), Expect = 9e-09
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNH---INLSDVQLFVLDECDKLVEKP 689
V GG S++E IA+ K+ IVV +PGR+ ++ N+ NL V VLDE D++ +
Sbjct: 616 VYGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRVTFLVLDEADRMFDMG 675
Query: 690 FLNDINYIFSALPNHKQVIMSSATF----QNIARKSICK 794
F IN I ++ +Q IM SATF +N+A+K + K
Sbjct: 676 FGPQINCIVDSIRPDRQTIMFSATFPPKVENVAKKILNK 714
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Frame = +1
Query: 274 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF------SIIALEKLNLNNGLQVMIL 435
++KP+ IQ +P G DL+ A++G+GKT+ F I+A K G+ +I+
Sbjct: 529 YEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIM 588
Query: 436 TPTREIAAQI 465
+PTRE+A QI
Sbjct: 589 SPTRELALQI 598
>UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 697
Score = 62.9 bits (146), Expect = 9e-09
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKK-KVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
G V+ GG+S N I + +K K I++ +PGRL +I H++LS V + VLDE DK+
Sbjct: 319 GIKTSVIYGGISKNLQIEQLEKEKPQILISTPGRLIEMIENGHVDLSSVTMLVLDEADKM 378
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSATF 764
+ K + + I + Q I+ SATF
Sbjct: 379 LSKGLIPQLKQIRGQIRPDSQNILFSATF 407
>UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 440
Score = 62.9 bits (146), Expect = 9e-09
Identities = 30/90 (33%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHI---NLSDVQLFVLDECDKLV 680
V ++GG+ N+ +++ ++ HIVVG+PGR +I + + + +V+ VLDE D+L
Sbjct: 101 VSTLVGGVDFNKQLSELERIPHIVVGTPGRTLDMIDKSPVLKEYIENVKYLVLDEADRLF 160
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATFQN 770
E + DI I +P KQ+I+++AT +
Sbjct: 161 EDSIIEDIQSILEFIPQEKQIILATATIND 190
Score = 39.5 bits (88), Expect = 0.096
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTR 447
G+Q P+ IQ +P ++ A++G+GKT F+ L+ L + G+ ++LT R
Sbjct: 21 GYQNPTKIQELAIPPLLRKQHVIANAETGSGKTATFAFPILQDLAKDPFGVFAIVLTANR 80
Query: 448 EIAAQICDVIKQIGS 492
E+A QI + GS
Sbjct: 81 ELAMQISEQFTIFGS 95
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 62.9 bits (146), Expect = 9e-09
Identities = 32/102 (31%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Frame = +3
Query: 498 QGSDV--EVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECD 671
+GS + + +GG + I K K + H+VVG+PGR+ LI +++ + V+DE D
Sbjct: 100 EGSQIRSKCFIGGTDKQKSIDKLKIQPHLVVGTPGRIADLIKEQALSVHKAESLVIDEAD 159
Query: 672 KLVEKPFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
+++ FL D++YI S +P Q+++ SAT + + K+
Sbjct: 160 LMLDMGFLADVDYIGSRMPEDLQMLVFSATIPEKLKPFLKKY 201
Score = 41.5 bits (93), Expect = 0.024
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVMILTPTR 447
GF +P+ IQ +P ++ ++++GTGKT + + L K++ + +QV+I PTR
Sbjct: 23 GFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNKIDPAKDVVQVVITAPTR 82
Query: 448 EIAAQICDVIKQIGSHHKG 504
E+A QI +I +G
Sbjct: 83 ELANQIYQEALKITQGEEG 101
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 62.9 bits (146), Expect = 9e-09
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTR 447
G++KPSPIQ +P G D+L A++G+GKT FS+ L+ L+ Q+++L PTR
Sbjct: 25 GYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTR 84
Query: 448 EIAAQICDVIKQIGSHHKGL 507
E+A Q+ + + H +G+
Sbjct: 85 ELAVQVAEAMTDFSKHMRGV 104
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/100 (29%), Positives = 51/100 (51%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
+G +V + GG + + ++ IVVG+PGRL + ++LS + VLDE D++
Sbjct: 102 RGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEM 161
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
+ F+ D+ I + +P Q + SAT R+ +F
Sbjct: 162 LRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRF 201
>UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP4 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 859
Score = 62.9 bits (146), Expect = 9e-09
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 5/87 (5%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-----NG 417
+GL SS F P+PIQ +P D+L AK+G+GKT+ F I LE+L L +G
Sbjct: 73 KGLKSSHFLNPTPIQSLAIPPALQARDILGSAKTGSGKTLAFLIPLLERLYLEKWGPMDG 132
Query: 418 LQVMILTPTREIAAQICDVIKQIGSHH 498
L ++++PTRE+A Q ++ IG +H
Sbjct: 133 LGAVVISPTRELAVQTFMQLRDIGKYH 159
Score = 37.5 bits (83), Expect = 0.39
Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRL-KHLIVGNHINLSDVQLFVLDECDKLVEKPF 692
+V+GG + E+ + + ++I++ +PGRL +HL + S V++ VLDE D+L++ F
Sbjct: 165 LVIGGKPLKEEQERLGR-MNILIATPGRLLQHLDSTVGFDSSAVKVLVLDEADRLLDLGF 223
Query: 693 LNDINYIFS 719
L + I S
Sbjct: 224 LPALKAIVS 232
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/93 (33%), Positives = 52/93 (55%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
+ GG+S F K + I+V +PGRL L IN +++ +LDE D++++ F+
Sbjct: 106 ITGGISYGLQNRMFSKPIDILVATPGRLLDLYQQKKINFKGLEVMILDEADRMLDMGFVP 165
Query: 699 DINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
DI I++A +Q++M SATF +K +F
Sbjct: 166 DIRKIYNATSKKQQMLMFSATFDPPIQKIAQEF 198
Score = 59.7 bits (138), Expect = 8e-08
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN----NGL 420
+ + +G+ +P+PIQ +P +L A++GTGKT F + L+KL N G
Sbjct: 14 KAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPILDKLTKNRSEGRGP 73
Query: 421 QVMILTPTREIAAQICDVIKQ 483
+V+I++PTRE+A QI D IK+
Sbjct: 74 RVLIVSPTRELATQITDSIKK 94
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/86 (33%), Positives = 49/86 (56%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKP 689
+ V GG S+ + K V I++ +PGRL + +L+ +Q+ VLDE D++++
Sbjct: 108 IVTVYGGTSIRVQQEQLAKGVDILIATPGRLLDHLFTKKTSLNQLQMLVLDEADRMLDMG 167
Query: 690 FLNDINYIFSALPNHKQVIMSSATFQ 767
FL DI I +P +Q ++ SATF+
Sbjct: 168 FLPDIQRIMKRMPEERQTLLFSATFE 193
Score = 53.6 bits (123), Expect = 5e-06
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQ-------VM 429
GF P+PIQ +P G D+L A++GTGKT + + ++ L+ + + +
Sbjct: 22 GFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPLIQMLSRQSREETAPKHPRAL 81
Query: 430 ILTPTREIAAQICDVIKQIGSH 495
IL PTRE+A Q+ D +KQ H
Sbjct: 82 ILAPTRELAQQVFDNLKQYAQH 103
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 62.5 bits (145), Expect = 1e-08
Identities = 32/88 (36%), Positives = 50/88 (56%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
+G+ V V GG+ I K V +VVG+PGRL L ++LS V++ VLDE D++
Sbjct: 158 RGARVLTVYGGVGYESQIDALKAGVDVVVGTPGRLLDLSQRKDLDLSHVRIVVLDEADEM 217
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSAT 761
++ FL D+ + P +Q ++ SAT
Sbjct: 218 LDLGFLPDVENLIGRTPASRQTMLFSAT 245
Score = 48.0 bits (109), Expect = 3e-04
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL-----------EKLNLNNG 417
G P PIQ +P+ G DL+ +A++GTGKT+ F I L E+L
Sbjct: 72 GIVSPFPIQAMSIPIAVEGTDLIGQARTGTGKTLAFGITILLRITLPGDEGWEELTTKGK 131
Query: 418 LQVMILTPTREIAAQICDVIKQIGS 492
Q +++ PTRE+A Q+ I S
Sbjct: 132 PQALVMCPTRELALQVSKDISTAAS 156
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 62.5 bits (145), Expect = 1e-08
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMIL 435
L G+ P+P+Q G DL++ +K+GTGKT F + LEK+ + ++ +IL
Sbjct: 44 LAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEKIPADERRVRALIL 103
Query: 436 TPTREIAAQICDVIKQIGSHHKGL 507
PTRE+A Q+ D +K + + HKGL
Sbjct: 104 CPTRELALQVADELKML-AKHKGL 126
Score = 53.2 bits (122), Expect = 7e-06
Identities = 27/100 (27%), Positives = 51/100 (51%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
+G + + GG S+ + ++ I+VG+PGR+ I ++ L VLDE D++
Sbjct: 124 KGLKIAAIYGGASMKQQEDALEEGTPIIVGTPGRVFDHINRGNLKLDACDHAVLDEADEM 183
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
+ + F ++ I LP +QV++ SAT + I ++
Sbjct: 184 LNQGFYEEVTRILDRLPKTRQVLLFSATVPTDIQNLIARY 223
>UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1;
Lactobacillus salivarius subsp. salivarius UCC118|Rep:
ATP-dependent RNA helicase - Lactobacillus salivarius
subsp. salivarius (strain UCC118)
Length = 426
Score = 62.5 bits (145), Expect = 1e-08
Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Frame = +3
Query: 480 TNRITPQGS--DVEVV--MGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQ 647
TN I P D+ V+ +GG +V I K KK +V+G+PGRL +LI + L ++
Sbjct: 78 TNTIRPWAKLLDLSVIGLLGGANVKRQIEKLKKHPEVVIGTPGRLLNLINLKKLKLHKIE 137
Query: 648 LFVLDECDKLV-EKPFLNDINYIFSALPNHKQVIMSSAT 761
V+DE D+++ ++ LND+ I S P+ Q+ SAT
Sbjct: 138 SIVIDEADEMLGDEDSLNDVREIVSHCPSEAQISFFSAT 176
Score = 50.8 bits (116), Expect = 4e-05
Identities = 25/70 (35%), Positives = 47/70 (67%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILTPTRE 450
GF +P+ IQ + P G +++ A +G+GKT+ +S+ LEK+ +G Q++I+ P++E
Sbjct: 13 GFTEPTLIQKYVYPKLAEGKNVVGLAPTGSGKTLAYSLPLLEKILPKDGSQLLIMAPSQE 72
Query: 451 IAAQICDVIK 480
+AAQ+ + I+
Sbjct: 73 LAAQLTNTIR 82
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 62.5 bits (145), Expect = 1e-08
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGR-LKHLIVGNHINLSDVQLFVLDECDKLVEK 686
V VV GG ++ K+K HIVVG+PGR L H G + S+V+ ++DE D +++
Sbjct: 103 VPVVFGGFPFDKQALTLKQKSHIVVGTPGRVLDHCETGT-LKCSNVKYVIIDEADLMLDM 161
Query: 687 PFLNDINYIFSALPNHKQVIMSSAT 761
FL+D+ I S LP + +++ SAT
Sbjct: 162 GFLDDVKRILSYLPENITIMLFSAT 186
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +1
Query: 280 KPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGL-QVMILTPTREIA 456
+P+PIQ +PL G D++ ++K+G+GKT F+I E + L Q ++L PTRE+A
Sbjct: 26 EPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPICESIVWEENLPQALVLEPTRELA 85
Query: 457 AQICDVIKQIG 489
Q+ D I +G
Sbjct: 86 YQVKDEIFNVG 96
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 238 FRIYTRGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-N 414
+R GL + F P+ IQ +P+ DL++++KSGTGKT+++ I ++ N N N
Sbjct: 33 YRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTGKTLIYVIAVVQSFNPNIN 92
Query: 415 GLQVMILTPTREIAAQICD 471
MI+ PTRE+A Q+ D
Sbjct: 93 QPHAMIVVPTRELAIQVQD 111
Score = 58.0 bits (134), Expect = 3e-07
Identities = 29/81 (35%), Positives = 54/81 (66%), Gaps = 5/81 (6%)
Frame = +3
Query: 546 DIAKFKKKVH---IVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVE-KPFLNDINYI 713
D+AK +K+++ +++G+PGRL HL ++S ++L VLDE D+L + K + ++ +
Sbjct: 133 DVAKDRKRMNESRVIIGTPGRLLHLYENRVFDVSKLRLLVLDEADQLYQTKSLQHTVSKL 192
Query: 714 FSALPNHKQVIMSSATF-QNI 773
A+P ++Q+I SAT+ QN+
Sbjct: 193 IEAMPKNRQIIACSATYDQNL 213
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 62.5 bits (145), Expect = 1e-08
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGV-PLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQV 426
+ ++S GF+KPSPIQ G+ P+ K G D + +A+SGTGKT FSI L+ ++ ++ Q
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIK-GKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQA 105
Query: 427 MILTPTREIAAQ 462
+IL PTRE+A Q
Sbjct: 106 LILAPTRELAQQ 117
Score = 62.1 bits (144), Expect = 2e-08
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +3
Query: 525 GGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLNDI 704
GG ED + ++ V +VVG+PGR+ LI + ++LF+LDE D+++ + F + I
Sbjct: 205 GGTDPKEDRKRLREGVQVVVGTPGRVLDLIQKKTLVTDHLKLFILDEADEMLGRGFKDQI 264
Query: 705 NYIFSALPNHKQVIMSSAT 761
N IF LP+ QV + SAT
Sbjct: 265 NKIFQNLPHDIQVALFSAT 283
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 62.5 bits (145), Expect = 1e-08
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-----NGL 420
GL + KP+ IQ + G D+L AK+G+GKT+ F I EKL N +GL
Sbjct: 76 GLKQGQYHKPTAIQRESILPALQGKDILAAAKTGSGKTLAFLIPVFEKLYTNQWTKLDGL 135
Query: 421 QVMILTPTREIAAQICDVIKQIGSHH 498
+I+TPTRE+A QI + + +IG H
Sbjct: 136 GALIITPTRELALQIFETVAKIGKLH 161
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/83 (26%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRL-KHLIVGNHINLSDVQLFVLDECDKLVEKPF 692
+++GG ++ + + + ++I++ +PGRL +H+ + +++++ VLDE D+ ++ F
Sbjct: 167 LIIGGQNLKAEKNRLHQ-LNIIICTPGRLLQHMDQNPLFDCTNLKILVLDEADRCLDLGF 225
Query: 693 LNDINYIFSALPNHKQVIMSSAT 761
+ +N I LP+ +Q ++ SAT
Sbjct: 226 ESAMNAIIENLPSERQTLLFSAT 248
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 62.5 bits (145), Expect = 1e-08
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLH--GVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGL-Q 423
+G+ S GF+ PS IQ G ++ +A+SGTGKT FSI L K++++ Q
Sbjct: 104 QGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGKTGAFSIGVLSKIDVSQKTTQ 163
Query: 424 VMILTPTREIAAQICDVIKQIGSHHKGL 507
++L PTRE+A QI +V K+IGS GL
Sbjct: 164 ALVLAPTRELATQIFNVFKEIGSRIPGL 191
Score = 57.2 bits (132), Expect = 4e-07
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +3
Query: 501 GSDVEVVMGGLS-VNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
G D+ + +GG V + A+ HI + +PGR LIV H+ + + ++ VLDE D++
Sbjct: 190 GLDIAIFIGGAQRVVDAQARAASHPHICICTPGRALDLIVSGHLRVQNFKMAVLDEADQM 249
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSAT 761
+ F+ +N I P Q+++ SAT
Sbjct: 250 LSDNFIEQVNDIMEYFPEDVQILLFSAT 277
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 62.5 bits (145), Expect = 1e-08
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = +3
Query: 522 MGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLND 701
+GG+ + + K+ VHIVV +PGRLK ++ ++L + LDE D+LV+ F +D
Sbjct: 263 IGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDD 322
Query: 702 INYIFSALPNHKQVIMSSAT----FQNIARKSICK 794
I +F + +Q ++ SAT Q AR ++ K
Sbjct: 323 IREVFDHFKSQRQTLLFSATMPTKIQIFARSALVK 357
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI----IALEK-----LNLN 411
L G +P+PIQ+ G+P+ G D++ A +G+GKT+VF + IAL++ +
Sbjct: 161 LKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAG 220
Query: 412 NGLQVMILTPTREIAAQICDVIKQ 483
G +I+ P+RE+A Q +V++Q
Sbjct: 221 EGPIGLIVCPSRELARQTYEVVEQ 244
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 62.5 bits (145), Expect = 1e-08
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVM 429
RG+ + GF+KPS IQ + G D++ +++SGTGKT FSI L+ L++ Q +
Sbjct: 51 RGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQAL 110
Query: 430 ILTPTREIAAQICDVIKQIGSH 495
IL PTRE+A QI + +G +
Sbjct: 111 ILAPTRELAVQIQKGLLALGDY 132
Score = 60.5 bits (140), Expect = 5e-08
Identities = 31/92 (33%), Positives = 50/92 (54%)
Frame = +3
Query: 522 MGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLND 701
+GG +V EDI K H+V G+PGR+ +I + +++ VLDE D+++ K F
Sbjct: 141 IGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQ 200
Query: 702 INYIFSALPNHKQVIMSSATFQNIARKSICKF 797
I ++ LP QV++ SAT + + KF
Sbjct: 201 IYDVYRYLPPATQVVLISATLPHEILEMTNKF 232
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 62.5 bits (145), Expect = 1e-08
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN----NGL 420
RGL S GF KP+PIQ +P+ G D++ A +G+GKT F + LE+L
Sbjct: 306 RGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTT 365
Query: 421 QVMILTPTREIAAQICDVIKQIGSH 495
+V+ILTPTRE+A Q V ++ SH
Sbjct: 366 RVVILTPTRELAIQCHAVAVKLASH 390
Score = 56.0 bits (129), Expect = 1e-06
Identities = 25/83 (30%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGR-LKHLIVGNHINLSDVQLFVLDECDKLVEKPF 692
+ +GGLS+ A+ + + +V+ +PGR + H+ + +++ VLDE D+++E F
Sbjct: 397 LAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGF 456
Query: 693 LNDINYIFSALPNHKQVIMSSAT 761
+++N I + LP +Q ++ SAT
Sbjct: 457 ADELNEILTTLPKSRQTMLFSAT 479
>UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP4 -
Ustilago maydis (Smut fungus)
Length = 869
Score = 62.5 bits (145), Expect = 1e-08
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 5/87 (5%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE-----KLNLNNG 417
RGL +G+ + IQ + L G D+L A++G+GKT+ F I LE K ++G
Sbjct: 71 RGLKRAGYTDMTDIQAKSLSLSLKGKDVLGAARTGSGKTLAFLIPVLEILYRRKWGPSDG 130
Query: 418 LQVMILTPTREIAAQICDVIKQIGSHH 498
L ++++PTRE+A QI +V+++IGS+H
Sbjct: 131 LGALVISPTRELAIQIFEVLRKIGSYH 157
Score = 53.2 bits (122), Expect = 7e-06
Identities = 27/83 (32%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRL-KHLIVGNHINLSDVQLFVLDECDKLVEKPF 692
+V+GG V ++ + + ++I++ +PGRL +H+ + S+VQ+ VLDE D++++ F
Sbjct: 163 LVIGGKDVKQEKDRLSR-INILIATPGRLLQHMDQTLGFDTSNVQVLVLDEADRILDMGF 221
Query: 693 LNDINYIFSALPNHKQVIMSSAT 761
+N I LP ++Q ++ SAT
Sbjct: 222 SRTLNAIVENLPRNRQTMLFSAT 244
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 62.1 bits (144), Expect = 2e-08
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVM 429
RG+ + GF+KPS IQ + G+D++ +A+SGTGKT F+I L++L ++ Q +
Sbjct: 48 RGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDQKETQAL 107
Query: 430 ILTPTREIAAQ 462
+L PTRE+A Q
Sbjct: 108 VLAPTRELAQQ 118
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 62.1 bits (144), Expect = 2e-08
Identities = 29/82 (35%), Positives = 46/82 (56%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
V+ GG+ N + + V I++ +PGRL L H+ L V++FVLDE D++++ F+
Sbjct: 110 VIFGGVGQNPQVRALQGGVDILIATPGRLMDLHGQKHLKLDRVEIFVLDEADRMLDMGFM 169
Query: 696 NDINYIFSALPNHKQVIMSSAT 761
DI I LP + + SAT
Sbjct: 170 QDIKKILPLLPQKRHNLFFSAT 191
Score = 58.8 bits (136), Expect = 1e-07
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN------NGL 420
L +G++ P+PIQL +P+ G DLL A++GTGKT FS+ L+ L+ +
Sbjct: 19 LKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQNLSKHTRKIEPKSP 78
Query: 421 QVMILTPTREIAAQICDVIKQIGSH 495
+ +ILTPTRE+A QI + I+ H
Sbjct: 79 RCLILTPTRELAIQIHENIEAYSKH 103
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 62.1 bits (144), Expect = 2e-08
Identities = 30/96 (31%), Positives = 55/96 (57%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKP 689
+ +++GG+ + E A +K V +++ +PGRL L I LS ++ V+DE D++++
Sbjct: 103 MSLLIGGVPMAEQQAALEKGVDVLIATPGRLLDLFERGKILLSSCEMLVIDEADRMLDMG 162
Query: 690 FLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
F+ DI I + LP +Q ++ SAT +K +F
Sbjct: 163 FIPDIETICTKLPTSRQTLLFSATMPPAIKKLADRF 198
Score = 53.2 bits (122), Expect = 7e-06
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGL----QVMILT 438
G+++P+P+Q +P DL+ A++GTGKT F + ++ L + +IL
Sbjct: 20 GYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMIDILAHGRCRARMPRSLILE 79
Query: 439 PTREIAAQICDVIKQIGSHHKGLMSKL 519
PTRE+AAQ+ + ++ G +HK MS L
Sbjct: 80 PTRELAAQVAENFEKYGKYHKLSMSLL 106
>UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=30;
cellular organisms|Rep: DEAD/DEAH box helicase-like
protein - Silicibacter sp. (strain TM1040)
Length = 710
Score = 62.1 bits (144), Expect = 2e-08
Identities = 29/87 (33%), Positives = 50/87 (57%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G+ + +GG+ + ++ ++ HIVV +PGRL+ I I+LS V VLDE D+++
Sbjct: 104 GAVLASCVGGMDMRDERRALERGAHIVVATPGRLRDHITRGSIDLSGVAAVVLDEADEML 163
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSAT 761
+ F D+ +I P +Q ++ SAT
Sbjct: 164 DLGFREDLEFILEETPEDRQTLLFSAT 190
Score = 33.1 bits (72), Expect = 8.3
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGL-------QVM 429
G+ +P+Q G DLL+ A++G+GKTV F + + +G +
Sbjct: 21 GYTSLTPVQEAVSNPELAGADLLVSAQTGSGKTVGFGLAIAPTILGEDGTFERAASPLAL 80
Query: 430 ILTPTREIAAQI 465
++ PTRE+A Q+
Sbjct: 81 VIAPTRELALQV 92
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 62.1 bits (144), Expect = 2e-08
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +3
Query: 513 EVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPF 692
E V GG + E I K + HI+V +PGRL LI +NLS+++ +LDE D+++ F
Sbjct: 103 EAVYGGKKIEEQIKKLETPKHILVATPGRLLDLIARKAVNLSNLKYLILDEADEMLNMGF 162
Query: 693 LNDINYIFS-ALPNHKQVIMSS 755
L DI+ I A P ++++ +S
Sbjct: 163 LPDIDKIMKIAKPTARKLLFTS 184
Score = 41.9 bits (94), Expect = 0.018
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVP-LGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQV 426
+ L + PS IQ +P + +++ A++GTGKT F + L+++N + QV
Sbjct: 14 QSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPVLQQINPSLQQTQV 73
Query: 427 MILTPTREIAAQI 465
++L PTRE+ Q+
Sbjct: 74 LVLVPTRELGQQV 86
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 62.1 bits (144), Expect = 2e-08
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN------N 414
+ L G+ P+PIQ +PL G DLL A++GTGKT F++ L +L +
Sbjct: 78 KALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHRLAEDKKPAPRR 137
Query: 415 GLQVMILTPTREIAAQICDVIKQIGSH 495
G + ++L+PTRE+A QI + + G H
Sbjct: 138 GFRCLVLSPTRELATQIAESFRDYGKH 164
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/87 (33%), Positives = 46/87 (52%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G V + GG+ + V +VV +PGRL + +L+ V++FVLDE D+++
Sbjct: 166 GLTVATIFGGVKYGPQMKALAAGVDVVVATPGRLMDHLGEKSAHLNGVEIFVLDEADQML 225
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSAT 761
+ F+ I I S LP +Q + SAT
Sbjct: 226 DLGFVVPIRKIASQLPKERQNLFFSAT 252
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 62.1 bits (144), Expect = 2e-08
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN-----LNNG 417
+ + G+ +PS IQ +P G D++ A++GTGKT F++ LE L+ +N
Sbjct: 18 KAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLEILSKGENAQSNQ 77
Query: 418 LQVMILTPTREIAAQICDVIKQIGSH 495
++ ++LTPTRE+AAQ+ + +K G H
Sbjct: 78 VRALVLTPTRELAAQVAESVKNYGQH 103
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/83 (31%), Positives = 49/83 (59%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
VV GG+ +N + ++ I++ +PGR+ L + +++ VLDE D++++ F+
Sbjct: 110 VVFGGVKINPQMMALRRGADILIATPGRMMDLYNQKAVRFDKLEVLVLDEADRMLDMGFI 169
Query: 696 NDINYIFSALPNHKQVIMSSATF 764
+DI I + LP +Q ++ SATF
Sbjct: 170 HDIKKILAILPKKRQNLLFSATF 192
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 62.1 bits (144), Expect = 2e-08
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGR-LKHLIVGNHINLSDVQLFVLDECDKL 677
G V + GG S ++ ++ VH+VVG+PGR + HL G+ ++LS ++ VLDE D++
Sbjct: 104 GFHVLPIYGGQSYGAQLSALRRGVHVVVGTPGRVIDHLEKGS-LDLSRIKTMVLDEADEM 162
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSATFQNIARK 782
+ F++D+ I P +Q + SAT + ++
Sbjct: 163 LRMGFIDDVETILQKTPESRQTALFSATMPSAIKR 197
Score = 58.0 bits (134), Expect = 3e-07
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGL-QVM 429
R L G++ PSPIQ +PL D+L +A++GTGKT F++ L ++++ Q +
Sbjct: 20 RVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILARIDIKQTTPQAL 79
Query: 430 ILTPTREIAAQICDVIKQIGSHHKG 504
+L PTRE+A Q+ + ++ ++ G
Sbjct: 80 VLAPTRELAIQVAEAFQRYATYIPG 104
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 62.1 bits (144), Expect = 2e-08
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
V GG+S I K + IVV +PGRL L + N ++L + V DE D++ + F++
Sbjct: 108 VFGGVSSYPQIQALKSGIDIVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFDMGFIH 167
Query: 699 DINYIFSALPNHKQVIMSSATF 764
DI I LP +Q ++ SAT+
Sbjct: 168 DIKQIVKMLPEKRQNLLFSATY 189
Score = 48.8 bits (111), Expect = 2e-04
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Frame = +1
Query: 274 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN------GLQVMIL 435
+ P+ IQ +P G D+L A++GTGKT F++ LEKL+ +V++L
Sbjct: 21 YDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEKLSSKERNKKRPQTRVLVL 80
Query: 436 TPTREIAAQICDVIK 480
PTRE+A Q+ IK
Sbjct: 81 VPTRELANQVTQNIK 95
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 62.1 bits (144), Expect = 2e-08
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHG-VPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMI 432
++ G +KPS IQ G VP K G D++ +A+SGTGKT F L++LN Q ++
Sbjct: 27 VLCEGIEKPSAIQQKGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQQLNEELTQCQALV 85
Query: 433 LTPTREIAAQICDVIKQIGSH 495
L PTRE+A QI V++ +G H
Sbjct: 86 LAPTRELAQQIEKVMRALGDH 106
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 62.1 bits (144), Expect = 2e-08
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL---NNGLQ 423
+G+ G++ P+PIQ +PL G D++ AK+G+GKT F I EKL G +
Sbjct: 52 KGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEKLQRREPTKGAR 111
Query: 424 VMILTPTREIAAQICDVIKQIG 489
+IL+PTRE+A Q IK++G
Sbjct: 112 ALILSPTRELAVQTYKFIKELG 133
Score = 56.8 bits (131), Expect = 6e-07
Identities = 27/86 (31%), Positives = 45/86 (52%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
+V+GG S++ + ++V +PGR HL V + L+ ++ V DE D+L E F
Sbjct: 142 LVLGGDSMDSQFSAIHTCPDVIVATPGRFLHLCVEMDLKLNSIEYVVFDEADRLFEMGFG 201
Query: 696 NDINYIFSALPNHKQVIMSSATFQNI 773
+N LP+ +Q +M SAT +
Sbjct: 202 EQLNETLHRLPSSRQTVMFSATLPKL 227
>UniRef50_Q4YV55 Cluster: RNA helicase , putative; n=4; Plasmodium
(Vinckeia)|Rep: RNA helicase , putative - Plasmodium
berghei
Length = 983
Score = 62.1 bits (144), Expect = 2e-08
Identities = 26/87 (29%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKP 689
+ +++GG+S+ + K+ + I++ +PGR +++ ++L V++ ++DE D+L+E
Sbjct: 122 INIIIGGISLCKQFEILKENIDILICTPGRFSYILDETKLSLEKVEMIIIDEADRLLELN 181
Query: 690 FLNDINYIFSALPN---HKQVIMSSAT 761
+ ND+N I+ + N +KQ I+ SAT
Sbjct: 182 YYNDMNNIYKCIGNKNLNKQTILVSAT 208
>UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 32; n=1; Arabidopsis thaliana|Rep: Probable
DEAD-box ATP-dependent RNA helicase 32 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 739
Score = 62.1 bits (144), Expect = 2e-08
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL-----NNG 417
RGL + + + +Q +P CG D+L A++G+GKT+ F I LEKL+ +G
Sbjct: 84 RGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEKLHRERWSPEDG 143
Query: 418 LQVMILTPTREIAAQICDVIKQIGSHHK 501
+ +I++PTRE+AAQ V+ ++G HK
Sbjct: 144 VGCIIISPTRELAAQTFGVLNKVGKFHK 171
Score = 49.6 bits (113), Expect = 9e-05
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Frame = +3
Query: 561 KKKVH---IVVGSPGRL-KHLIVGNHINLSDVQLFVLDECDKLVEKPFLNDINYIFSALP 728
K++VH I+V +PGRL +H+ + +Q+ +LDE D++++ F ++ I S LP
Sbjct: 188 KERVHEMNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLP 247
Query: 729 NHKQVIMSSAT 761
H+Q ++ SAT
Sbjct: 248 KHRQTLLFSAT 258
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/86 (31%), Positives = 48/86 (55%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
+++GG S+++ A + I++G+PGRL H+I ++ L +V+ V DE D+L E F
Sbjct: 140 LILGGDSMDDQFAALHENPDIIIGTPGRLMHVIKEMNLKLQNVEYVVFDEADRLFEMGFA 199
Query: 696 NDINYIFSALPNHKQVIMSSATFQNI 773
+ I P +Q ++ SAT +
Sbjct: 200 EQLQEIIRRFPETRQTLLFSATLPKV 225
Score = 60.1 bits (139), Expect = 6e-08
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Frame = +1
Query: 235 SFRIYTRGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL---N 405
SF ++ +G++ G++ P+PIQ +P+ G D++ A++G+GKT F I E+L
Sbjct: 45 SFPVF-KGVMRKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAAFLIPMFERLKAPQ 103
Query: 406 LNNGLQVMILTPTREIAAQICDVIKQIGSHHK 501
G + +IL+PTRE+A Q K++G K
Sbjct: 104 AQTGARALILSPTRELALQTMKFTKELGKFTK 135
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/81 (38%), Positives = 50/81 (61%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
V GG+S+N + + + V I++ +PGRL L+ + LSDV++ VLDE DK++ F
Sbjct: 117 VYGGVSINPQMIQLQG-VEILIATPGRLLDLVDSKAVYLSDVEVLVLDEADKMLNLGFKE 175
Query: 699 DINYIFSALPNHKQVIMSSAT 761
++ IF LP +Q ++ SAT
Sbjct: 176 EMANIFKLLPQKRQNLLFSAT 196
Score = 44.0 bits (99), Expect = 0.004
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Frame = +1
Query: 274 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL-----NNGLQVMILT 438
+ P PIQ +P G D+L A++G+GKT F + L+ L N + ++L
Sbjct: 29 YNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPILQMLQTKPLGKNRHINALVLV 88
Query: 439 PTREIAAQICDVIK 480
PTRE+A Q+ V +
Sbjct: 89 PTRELAVQVGQVFQ 102
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = +3
Query: 501 GSDVEVVM--GGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDK 674
GS V VM GG+S+ E I + HI+V +PGRL L+ ++LS + V DE D+
Sbjct: 109 GSSVTSVMVYGGVSIGEQIRQLANGTHILVATPGRLLDLLRKRALSLSQLTHLVFDEADR 168
Query: 675 LVEKPFLNDINYIFSALPNHKQVIMSSATFQN 770
+++ F ++I + LP+ +Q ++ SAT +
Sbjct: 169 MLDMGFKDEIVEVLKRLPSTRQTLLFSATLDD 200
Score = 47.6 bits (108), Expect = 4e-04
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 15/85 (17%)
Frame = +1
Query: 274 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-----NL---------- 408
+Q+P+PIQL +P+ G D++ A++GTGKT F++ L +L NL
Sbjct: 21 YQQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLLHQLLTHQDNLAAQPDTQHIN 80
Query: 409 NNGLQVMILTPTREIAAQICDVIKQ 483
+ + ++L PTRE+A Q+ I+Q
Sbjct: 81 STPITALVLVPTRELAQQVHSSIEQ 105
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/90 (36%), Positives = 49/90 (54%)
Frame = +3
Query: 495 PQGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDK 674
P G + GG S I+ K V IV+G+PGR+K LI L+DV VLDE D+
Sbjct: 256 PCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVVLDEADR 315
Query: 675 LVEKPFLNDINYIFSALPNHKQVIMSSATF 764
+++ F ++ I S + +Q +M SAT+
Sbjct: 316 MLDMGFEPEVRAILSQTASVRQTVMFSATW 345
Score = 55.2 bits (127), Expect = 2e-06
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 8/82 (9%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL--------EKLNLNNGLQV 426
GF++PSPIQ + P G D + A +G+GKT+ F + AL EK +V
Sbjct: 111 GFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRV 170
Query: 427 MILTPTREIAAQICDVIKQIGS 492
++L+PTRE+A QI DV+ + G+
Sbjct: 171 LVLSPTRELAQQIADVLCEAGA 192
Score = 39.5 bits (88), Expect = 0.096
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +3
Query: 495 PQGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLD 662
P G + GG S I+ K V IV+G+PGR+K LI L+DV + D
Sbjct: 193 PCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVIAD 248
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +3
Query: 522 MGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLND 701
+GG+S+ ED + ++K +V+ +PGRL+ LI +N D + VLDE D L+ + F+
Sbjct: 127 IGGVSIAEDRERAREKPLVVLATPGRLQQLIDEEILNFRDCSIVVLDEADMLLSQNFIRS 186
Query: 702 INYIFSALPN-HKQVIMSSATFQNIARKSIC 791
I +A N +Q + SATF N + K C
Sbjct: 187 IENCLAACSNKRRQTLFFSATFSN-SLKEFC 216
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVMI 432
GL GFQ+ +P+Q +P D++ AK+GTGKT F I L+ +N + +Q ++
Sbjct: 35 GLTQEGFQQLTPVQELAIPHILARRDVVARAKNGTGKTGSFLIPILQMVNPAKDHIQALV 94
Query: 433 LTPTREIAAQICDVIKQIGSH 495
L TRE+A Q V K + +
Sbjct: 95 LLHTRELAMQTAKVAKTLSKN 115
>UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n=2;
Theileria|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 839
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/84 (39%), Positives = 47/84 (55%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKP 689
V +++GG SV IV+ +PGRL + + + LS + V+DE DKL E
Sbjct: 115 VSLLIGGKSVESQFGSLSFNPDIVIATPGRLVYHLEQKSLTLSLLTHLVIDEADKLFEMG 174
Query: 690 FLNDINYIFSALPNHKQVIMSSAT 761
FL D+ +F+ LP KQVI+ SAT
Sbjct: 175 FLPDVYKVFAYLPKIKQVILVSAT 198
Score = 48.8 bits (111), Expect = 2e-04
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = +1
Query: 274 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN---GLQVMILTPT 444
+ +PS IQ +P G D+L A++G+GKTV + ++ L+ ++ G++ +IL PT
Sbjct: 30 YDQPSAIQRKTIPHILAGSDVLCIARTGSGKTVAYIAPIVQLLDFHSPVVGVRCLILLPT 89
Query: 445 REIAAQICDVIKQ 483
RE+A Q+ V+K+
Sbjct: 90 RELALQVEGVLKK 102
>UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5;
Trypanosoma|Rep: Mitochondrial DEAD box protein -
Trypanosoma brucei
Length = 546
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Frame = +1
Query: 250 TRGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL--NLNNGLQ 423
++GL SSGF +PIQ + +P+ G D++ A +G+GKTV F++ AL+K + N +
Sbjct: 130 SKGLQSSGFSCTTPIQSYTIPVLDEGHDMIGLAPTGSGKTVAFAVPALKKFQWSPNGSPR 189
Query: 424 VMILTPTREIAAQICDVIKQIGS 492
+++L PTRE+ Q V Q+ S
Sbjct: 190 IVVLAPTRELVQQTAKVFHQLSS 212
Score = 39.9 bits (89), Expect = 0.072
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +3
Query: 525 GGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLNDI 704
GG + ++V PGRLK + + +V V DE D+L++ F +
Sbjct: 222 GGAPREAQARRLHNGCDVLVACPGRLKDFLQNGDVIFDEVSFLVFDEADRLLDMGFKVQL 281
Query: 705 NYIFSALPNHK--QVIMSSATFQNIARK 782
+ I +H+ Q +M SAT+ + +
Sbjct: 282 DDILGYFSSHRPAQTMMWSATWPPVVEQ 309
>UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1;
Picrophilus torridus|Rep: ATP-dependent RNA helicase -
Picrophilus torridus
Length = 387
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/82 (37%), Positives = 51/82 (62%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
VV GG S+ + I + I++G+PGR+ LI + +NL V +F+LDE D +++ F+
Sbjct: 104 VVYGGSSMEKQIHDLRDS-KIIIGTPGRIIDLINRDLLNLEHVGMFILDEADMMLDMGFI 162
Query: 696 NDINYIFSALPNHKQVIMSSAT 761
+DI I LP +Q +++SAT
Sbjct: 163 DDIYKIIENLPEKRQNVLASAT 184
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/88 (34%), Positives = 51/88 (57%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
V GG S++ I + ++ V IVVG+PGR+ I I L +V VLDE D+++ F++
Sbjct: 105 VYGGQSIDRQIRELRRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFID 164
Query: 699 DINYIFSALPNHKQVIMSSATFQNIARK 782
D+ I ++ K++++ SAT + K
Sbjct: 165 DVEEILKSVSTEKRMLLFSATLPDSIMK 192
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGF-DLLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVMI 432
L GF P+PIQ +P+ G D++ +A++GTGKT F I LE ++ + Q +I
Sbjct: 17 LEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPILETIDESSRNTQALI 76
Query: 433 LTPTREIAAQICDVIKQI 486
L PTRE+A Q+ + I I
Sbjct: 77 LAPTRELAIQVAEEIDSI 94
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/93 (34%), Positives = 50/93 (53%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
+ GG S +A ++ +VVG+PGR+ + ++LS V VLDE D+++ F +
Sbjct: 116 IYGGSSYAVQLAGLRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFAD 175
Query: 699 DINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
D+ I S P +KQV + SAT RK K+
Sbjct: 176 DVERILSETPEYKQVALFSATMPPAIRKLSAKY 208
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGL-QVM 429
R + G++ P+ IQ +P G D++ A++GTGKT F+I L K+++ + + Q +
Sbjct: 26 RAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQAL 85
Query: 430 ILTPTREIAAQICDVIKQIGSH 495
+L PTRE+A Q+ + + G++
Sbjct: 86 VLVPTRELALQVAEAFGRYGAY 107
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
V GG + +E I + KK V I++ +PGRL L + N +NL ++ VLDE DK+++ F
Sbjct: 349 VYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEP 408
Query: 699 DINYIFSALPNHKQVIMSSATF 764
I I + +Q +M+SAT+
Sbjct: 409 QIMKILLDVRPDRQTVMTSATW 430
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Frame = +1
Query: 268 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQ-------V 426
+GFQKP+PIQ P+ G DL+ A++GTGKT+ + + L L L+ +
Sbjct: 260 AGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGM 319
Query: 427 MILTPTREIAAQI 465
++LTPTRE+A Q+
Sbjct: 320 LVLTPTRELALQV 332
>UniRef50_UPI00006CEB85 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 630
Score = 61.3 bits (142), Expect = 3e-08
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Frame = +1
Query: 247 YTRGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-NLNNGL- 420
Y R L F +P+PIQ+ +P G +++ +AK+GTGKT+ FS I LEKL N +
Sbjct: 29 YLRALEKLHFTEPTPIQILSIPEGLTEKNIIAQAKAGTGKTLAFSSIILEKLINRRQTIF 88
Query: 421 -----QVMILTPTREIAAQICDVIKQI 486
V+I+ PTRE+A Q+ + I+Q+
Sbjct: 89 QDSNPLVLIILPTRELAIQVFEFIQQL 115
Score = 54.0 bits (124), Expect = 4e-06
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFK-KKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV-EKP 689
+ +GGL + +D K + V I++G+ GR+ LI N + LS + VLDE DKL+ +K
Sbjct: 134 IFIGGLPLQDDRRNLKIQHVKIIIGTIGRIVALIKENSLVLSSINTLVLDEADKLMGQKD 193
Query: 690 FLNDINYIFSAL 725
F I YIF AL
Sbjct: 194 FYKHITYIFDAL 205
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 61.3 bits (142), Expect = 3e-08
Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVMILTPTR 447
GF +PSPIQ +P G D++ +A++GTGKT F + L++++ + +Q ++L PTR
Sbjct: 24 GFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQRIDAADRSVQALVLCPTR 83
Query: 448 EIAAQICDVIKQIGSHHKGL 507
E+A Q+ + + + H +G+
Sbjct: 84 ELALQVANGLTALAKHLRGV 103
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/88 (31%), Positives = 45/88 (51%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
+G + V GG + + ++ +VVG+PGR+ I + L V++ VLDE D++
Sbjct: 101 RGVRILSVYGGQPIEPQASALRRGAQVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEM 160
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSAT 761
++ F DI I S +P Q SAT
Sbjct: 161 LDMGFREDIERILSEMPEWVQSAFFSAT 188
>UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putative;
n=58; Proteobacteria|Rep: ATP-dependent RNA helicase
RhlE, putative - Burkholderia mallei (Pseudomonas
mallei)
Length = 516
Score = 61.3 bits (142), Expect = 3e-08
Identities = 27/81 (33%), Positives = 52/81 (64%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
++GG++ + + K I+V +PGRL + I+LS++++ VLDE D++++ F++
Sbjct: 172 ILGGVAYGQQLMLLAKNPEILVATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFID 231
Query: 699 DINYIFSALPNHKQVIMSSAT 761
DI+ I +A P +Q ++ SAT
Sbjct: 232 DIDTIVAATPATRQTMLFSAT 252
Score = 47.2 bits (107), Expect(2) = 1e-06
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 399
L ++G+ KP+P+Q +P G G DLL+ + +G+GKT F + A+E+
Sbjct: 58 LQAAGYVKPTPVQQRAIPAGIAGRDLLVSSPTGSGKTAAFMLPAIER 104
Score = 28.3 bits (60), Expect(2) = 1e-06
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 424 VMILTPTREIAAQICDVIKQIGSHHKGL 507
+++LTPTRE+A Q+ G H + L
Sbjct: 140 LLVLTPTRELAMQVTTAASTYGKHLRRL 167
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 61.3 bits (142), Expect = 3e-08
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVMILTPTR 447
G+++PSPIQ +P+ G D++ +A++GTGKT F++ L +++ Q++IL PTR
Sbjct: 42 GYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSRIDPARREPQLLILAPTR 101
Query: 448 EIAAQICDVIKQIGSHHKGL 507
E+A Q+ + S G+
Sbjct: 102 ELALQVATAFETYASQLPGV 121
Score = 59.3 bits (137), Expect = 1e-07
Identities = 31/94 (32%), Positives = 52/94 (55%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G V V GG + + ++ I+V +PGRL + + LS V+ VLDE D+++
Sbjct: 120 GVGVVAVYGGAPMGPQLKALRQGAQILVATPGRLCDHLRRDEQLLSTVKHLVLDEADEML 179
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATFQNIARK 782
+ F+ D+ IF+ALP +Q ++ SAT + R+
Sbjct: 180 KLGFMEDLEVIFAALPESRQTVLFSATLPHSIRE 213
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 61.3 bits (142), Expect = 3e-08
Identities = 27/74 (36%), Positives = 46/74 (62%)
Frame = +1
Query: 268 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILTPTR 447
+GF+ P+PIQ +P G D++ A +GTGKT F + +++L G + ++L PTR
Sbjct: 22 AGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLIDRLAGKPGTRALVLAPTR 81
Query: 448 EIAAQICDVIKQIG 489
E+A QI + +++ G
Sbjct: 82 ELALQIGEELERFG 95
Score = 55.2 bits (127), Expect = 2e-06
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRL-KHLIVGNHINLSDVQLFVLDECDKLVEKPF 692
V++GG+ + + ++K IV+ +PGRL HL GN L ++ VLDE D++++ F
Sbjct: 104 VIIGGVGMAQQAEALRQKREIVIATPGRLVDHLEQGN-ARLDGIEALVLDEADRMLDMGF 162
Query: 693 LNDINYIFSALPNHKQVIMSSAT 761
++ I LP +Q ++ SAT
Sbjct: 163 KPQLDRILRRLPKQRQTLLFSAT 185
>UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent rRNA
helicase RRP3 - Encephalitozoon cuniculi
Length = 400
Score = 61.3 bits (142), Expect = 3e-08
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = +3
Query: 483 NRITPQGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL-KHLIVGNHINLSDVQLFVL 659
N G V +++GG + N + K+ H+VVG+PGR+ +H++ V+ FVL
Sbjct: 90 NMFQATGLRVCLLVGGANFNVQANQLSKRPHVVVGTPGRIAEHVLKTKSFRTERVRKFVL 149
Query: 660 DECDKLVEKPFLNDINYIFSALPNHKQVIMSSATFQN 770
DE D+ E+ F+ D+ I +L +Q ++ +AT +
Sbjct: 150 DEADRFFEQDFVEDLETIIPSLREKRQTLLFTATMSD 186
Score = 43.6 bits (98), Expect = 0.006
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI-IALEKLNLNNGLQVMILTPTR 447
G +P+ +Q +P G D++ +++G+GKT+ F + I L N +++ PTR
Sbjct: 20 GITRPTEVQRQVIPAVLGGGDVIAVSQTGSGKTLAFVLPIVSHLLQKNRSFYCLVVAPTR 79
Query: 448 EIAAQICD 471
E+++QI +
Sbjct: 80 ELSSQIAE 87
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 61.3 bits (142), Expect = 3e-08
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = +3
Query: 498 QGSDVEVVM--GGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECD 671
+G+D++ V+ GG S+ E I++ +PGR HL V +NLS V+ V DE D
Sbjct: 181 KGTDLKTVLLVGGDSLEEQFGLMAANPDIIIATPGRFLHLKVEMSLNLSSVRYVVFDEAD 240
Query: 672 KLVEKPFLNDINYIFSALPNHKQVIMSSAT 761
+L E F + I ALP +Q ++ SAT
Sbjct: 241 RLFEMGFAAQLTEILHALPPSRQTLLFSAT 270
Score = 56.0 bits (129), Expect = 1e-06
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN---GLQ 423
R + GF P+PIQ +PL D++ A++G+GKT F I +E+L ++ G +
Sbjct: 99 RAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIPMIERLKAHSARVGAR 158
Query: 424 VMILTPTREIAAQICDVIKQIG 489
+I++P+RE+A Q V+K++G
Sbjct: 159 AIIMSPSRELALQTLKVVKELG 180
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 60.9 bits (141), Expect = 4e-08
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
+ +GG+ V+E + + VHI+V +PGRL ++ + L + +DE D++++ F
Sbjct: 294 LAIGGVPVSESLDVISRGVHIMVATPGRLMDMLDKKMVKLGVCRYLCMDEADRMIDMGFE 353
Query: 696 NDINYIFSALPNHKQVIMSSAT----FQNIARKSICK 794
D+ IFS +Q ++ SAT QN AR ++ K
Sbjct: 354 EDVRTIFSFFEGQRQTLLFSATMPKKIQNFARSALVK 390
Score = 50.8 bits (116), Expect = 4e-05
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI----IALEK-----LNL 408
GL G KP+PIQ+ G+P G D++ A +G+GKT+VF + LE+
Sbjct: 193 GLEQKGITKPTPIQVQGIPAVLSGRDIIGIAFTGSGKTLVFVLPLIMFCLEQEVALPFGR 252
Query: 409 NNGLQVMILTPTREIAAQICDVIK 480
N G +I+ P+RE+A Q D+I+
Sbjct: 253 NEGPYGLIICPSRELAKQTYDIIQ 276
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 60.9 bits (141), Expect = 4e-08
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIV---GNHINLSDVQLFVLDECDKLVEK 686
+++GG+ V + + K+ ++VG+PGR+ + I G ++ V+ V+DE DKL+E
Sbjct: 114 LLVGGMDVMKQSVQLAKRPQVIVGTPGRIVYHIKNTKGVEESIEKVKFLVIDEADKLLEM 173
Query: 687 PFLNDINYIFSALPNHKQVIMSSATFQNIARK 782
F N+I+Y+ LP + ++ SAT K
Sbjct: 174 DFANEIDYLIEKLPKQRTTMLFSATMSTKVEK 205
Score = 56.0 bits (129), Expect = 1e-06
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL----NLNNGLQVMILT 438
G++KP+ IQ + +P+ D++ A++G+GKT F + ++ L N G +I+
Sbjct: 28 GYKKPTRIQENSIPVALQKKDIIGIAQTGSGKTASFLLPMVQHLLNVKEKNRGFYCIIIE 87
Query: 439 PTREIAAQICDVIKQIGSHHKGLMSKL 519
PTRE+AAQ+ +VI ++G GL S L
Sbjct: 88 PTRELAAQVVEVIDEMGKALPGLTSCL 114
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 60.9 bits (141), Expect = 4e-08
Identities = 29/81 (35%), Positives = 47/81 (58%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
+ GG ++ I K V IVVG+PGR+ LI + L+D+ VLDE D+++ F++
Sbjct: 108 IYGGQPIDRQIRALKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFID 167
Query: 699 DINYIFSALPNHKQVIMSSAT 761
D+ I +L +Q ++ SAT
Sbjct: 168 DLEEIVKSLKTDRQTLLFSAT 188
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN---NGLQVMILTP 441
GF++PS IQ +P+ G D++ +A++GTGKT F + + + + +IL P
Sbjct: 23 GFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINNADFSGKKKSPKALILAP 82
Query: 442 TREIAAQICDVIKQIGSHHK 501
TRE+A Q+ + + ++G H K
Sbjct: 83 TRELAIQVNEELVRLGKHEK 102
>UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Propionibacterium acnes
Length = 700
Score = 60.9 bits (141), Expect = 4e-08
Identities = 32/99 (32%), Positives = 50/99 (50%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G ++ GG+S FK+ V +VV +PGRL L+ +LS V + VLDE D +
Sbjct: 328 GLSTILIAGGMSYGPQTKAFKRGVDLVVATPGRLVDLLETGDADLSGVAVTVLDEADHMA 387
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
E F+ + I A+P Q ++ SAT K + ++
Sbjct: 388 ELGFMEAVGSILDAIPADGQRLLFSATLDGAVNKLVRRY 426
Score = 54.0 bits (124), Expect = 4e-06
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL----NNGLQV 426
L +G P IQ+ +P G D+L A +G+GKT+ F + L +L+ +N +
Sbjct: 244 LAKTGITDPFRIQIAAIPDAIAGRDVLGRASTGSGKTLAFGVPLLSRLSATPREDNRPRA 303
Query: 427 MILTPTREIAAQICDVIKQIGS 492
+IL+PTRE+A QI D + + S
Sbjct: 304 LILSPTRELAMQIADALSSLAS 325
>UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2;
Frankia|Rep: DEAD/DEAH box helicase-like - Frankia sp.
(strain CcI3)
Length = 649
Score = 60.9 bits (141), Expect = 4e-08
Identities = 33/88 (37%), Positives = 51/88 (57%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
+G V V GG + ++ + V IVVG+PGRL L + ++L+ V VLDE D++
Sbjct: 184 RGLRVLSVYGGRAYEPQLSALRAGVDIVVGTPGRLLDLARQHVLDLAGVGTLVLDEADEM 243
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSAT 761
++ FL D+ I S LP +Q ++ SAT
Sbjct: 244 LDLGFLPDVERIMSQLPTERQTMLFSAT 271
Score = 41.9 bits (94), Expect = 0.018
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI-----IALEKLNLNNGLQ 423
L +G PIQ +PL D++ +A++GTGKT+ F + + K + Q
Sbjct: 100 LTEAGIVHAFPIQELTLPLALARNDIIGQARTGTGKTLAFGVPVVQTVLAAKEGADGRPQ 159
Query: 424 VMILTPTREIAAQICDVIKQIGSHHKGL 507
+++ PTRE+ Q+ + + G+ +GL
Sbjct: 160 ALVVVPTRELCVQVTADVTRAGA-RRGL 186
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 60.9 bits (141), Expect = 4e-08
Identities = 28/88 (31%), Positives = 49/88 (55%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G + V GG + + K V I+VG+PGR+ + HI+L+ ++ LDE D+++
Sbjct: 100 GLSIVTVYGGTDLEKQAKTLAKGVDIIVGTPGRVMDMNERGHIDLNSPKMLCLDEADRML 159
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATF 764
+ F DI +I + + +Q ++ SATF
Sbjct: 160 DMGFFPDIMWIVERMTSRQQTLLFSATF 187
Score = 56.4 bits (130), Expect = 8e-07
Identities = 25/70 (35%), Positives = 44/70 (62%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMIL 435
GL G++ + +Q VP+ + G D++ +A++G+GKT F + LE+ + LQ ++L
Sbjct: 19 GLAQLGWEFATQVQRDTVPIARQGTDVIGQARTGSGKTAAFGLPILERCQPSGKLQALVL 78
Query: 436 TPTREIAAQI 465
PTRE+A Q+
Sbjct: 79 APTRELANQV 88
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 60.9 bits (141), Expect = 4e-08
Identities = 26/82 (31%), Positives = 51/82 (62%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
V GG+ + IA+ ++ V +++ +PGRL L ++ ++++ V DE D++++ F++
Sbjct: 107 VYGGVRIEPQIAQLQEGVDVLIATPGRLLDLYEQRALHFENLEILVFDEADRMLDLGFID 166
Query: 699 DINYIFSALPNHKQVIMSSATF 764
D+ I S LP +Q ++ SATF
Sbjct: 167 DVKRIQSLLPVKRQTLLFSATF 188
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-----NGLQ 423
+ + G+ + IQ +PL DLL A++GTGKT F++ L++L G++
Sbjct: 16 IATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLLQRLAAKQSTKVQGVR 75
Query: 424 VMILTPTREIAAQI 465
+I+TPTRE+AAQ+
Sbjct: 76 SLIVTPTRELAAQV 89
>UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3;
Rhodospirillales|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 731
Score = 60.9 bits (141), Expect = 4e-08
Identities = 29/89 (32%), Positives = 51/89 (57%)
Frame = +3
Query: 495 PQGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDK 674
P G+ V +GG+ + ++ HIVVG+PGRL + +NLS ++ VLDE D+
Sbjct: 143 PAGARVVSCIGGMDARREAQALERGCHIVVGTPGRLCDHLGRGRLNLSRLRAVVLDEADE 202
Query: 675 LVEKPFLNDINYIFSALPNHKQVIMSSAT 761
+++ F +++ I A P ++ ++ SAT
Sbjct: 203 MLDLGFRDELEEILDATPAERRTLLFSAT 231
Score = 35.9 bits (79), Expect = 1.2
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII-------ALEKLNLNNG 417
L + G+ +P+Q + DLL+ A++G+GKTV + + A E+L
Sbjct: 58 LDAKGYTSLTPVQDAVLTADAAERDLLVSAQTGSGKTVAYGLALADTLLGADERLGQAGA 117
Query: 418 LQVMILTPTREIAAQI 465
+I+ PTRE+A Q+
Sbjct: 118 PLALIVAPTRELAMQV 133
>UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. B14905|Rep: Putative uncharacterized
protein - Bacillus sp. B14905
Length = 382
Score = 60.9 bits (141), Expect = 4e-08
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = +3
Query: 501 GSDVEV--VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDK 674
G+D+ V ++GG + I K KKK IVVG+PGRL L + L +++ +LDECD+
Sbjct: 91 GTDITVQQLIGGANSARQIEKLKKKPTIVVGTPGRLNELARAGKLKLKEIETVILDECDQ 150
Query: 675 LVEKPFLNDINYIFSALPNHKQVIMSSAT 761
L+ + + I +QV++ SAT
Sbjct: 151 LLSREYRVVIKSFIEGSAFGRQVVVVSAT 179
Score = 43.6 bits (98), Expect = 0.006
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +1
Query: 274 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVMILTPTRE 450
F+ IQ +P G D++ E+ +G+GKT+ + + L K+N Q +I+ P++E
Sbjct: 17 FEATMKIQEEMIPAMLEGKDIVAESPTGSGKTLAYVLPLLNKVNGAKKQTQGLIVAPSQE 76
Query: 451 IAAQICDVIKQ 483
+A QI +VI++
Sbjct: 77 LAMQIVEVIRE 87
>UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 542
Score = 60.5 bits (140), Expect = 5e-08
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN-----LNNG 417
+ L +G+ K + IQ +PL G D++ +A++G+GKT+ F I +E LN NG
Sbjct: 94 KALEEAGYTKMTTIQARSIPLLLMGKDIMAKARTGSGKTLAFLIPIVEILNKIHFQTRNG 153
Query: 418 LQVMILTPTREIAAQICDVIKQIGSH 495
+I++PTRE+A Q DV+++I +H
Sbjct: 154 TGAIIISPTRELAIQTFDVLEKILAH 179
Score = 52.0 bits (119), Expect = 2e-05
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRL-KHLIVGNHINLSDVQLFVLDECDKLVEKPF 692
+++GG S ++ KK IVV +PGRL H+I +++ V+DE D+++E F
Sbjct: 186 LIIGGSSKKKEEEALKKGASIVVATPGRLLDHIINTKCFIYRNLKCLVIDEADRIMEVGF 245
Query: 693 LNDINYIFSALPNHKQVIMSSAT 761
++ I + LP ++Q ++ SAT
Sbjct: 246 EEEMRQILNRLPKNRQTMLFSAT 268
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 60.5 bits (140), Expect = 5e-08
Identities = 31/92 (33%), Positives = 50/92 (54%)
Frame = +3
Query: 522 MGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLND 701
+GG +V EDI K H+V G+PGR+ +I + +++ VLDE D+++ K F
Sbjct: 120 IGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQ 179
Query: 702 INYIFSALPNHKQVIMSSATFQNIARKSICKF 797
I ++ LP QV++ SAT + + KF
Sbjct: 180 IYDVYRYLPPATQVVLISATLPHEILEMTNKF 211
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL 408
RG+ + GF+KPS IQ + G D++ +++SGTGKT FS+ L+ L++
Sbjct: 51 RGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDI 102
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 60.5 bits (140), Expect = 5e-08
Identities = 30/90 (33%), Positives = 53/90 (58%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G ++VV GG S+ I ++ V ++V +PGRL+ +I +L +VQ+ VLDE D++
Sbjct: 160 GLKMKVVCGGTSMGNQIYALERGVDVLVATPGRLRDIINRGACSLENVQIAVLDEADQMS 219
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATFQN 770
+ FL ++ + +P Q ++ SAT +N
Sbjct: 220 DLGFLPEVTELLDQVPAGGQRMLFSATMEN 249
Score = 50.8 bits (116), Expect = 4e-05
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL----NLNNGL 420
R L +G P PIQ +P G D+L ++G+GKT+ F + L L +
Sbjct: 74 RKLAQNGVTTPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPTLATLAGGRTEKHKP 133
Query: 421 QVMILTPTREIAAQICDVIKQIG 489
+ +ILTPTRE+A Q+ D ++ G
Sbjct: 134 RAVILTPTRELAMQVADALQPYG 156
>UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1;
Ureaplasma parvum|Rep: ATP-dependent RNA helicase -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 443
Score = 60.5 bits (140), Expect = 5e-08
Identities = 35/87 (40%), Positives = 51/87 (58%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILT 438
LI+ +P+PIQL +PL +++ A +GTGKT+ F + L L+L+ LQV+I+T
Sbjct: 15 LINQKIFEPTPIQLKTMPLIAKRENIIGVAPTGTGKTLAFVLPILNNLDLSQKLQVIIIT 74
Query: 439 PTREIAAQICDVIKQIGSHHKGLMSKL 519
PTRE+A QI I H L K+
Sbjct: 75 PTRELARQIFSKIIVFKKHQPLLQVKM 101
Score = 52.0 bits (119), Expect = 2e-05
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKP 689
V++++GG S+++ I K +++ +P RLK ++ ++L V V DE D L++
Sbjct: 99 VKMLIGGESIDQQINSQLNKSQLLIATPTRLKQILTRQILDLHHVNALVFDEADMLMDLG 158
Query: 690 FLNDINYIFSALPNHK-QVIMSSATFQNIARKSICKF 797
F++D+ +I S N Q I SAT + + K+
Sbjct: 159 FISDLEFINSQFTNKDVQKISFSATLHEMLSIQLKKY 195
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 60.5 bits (140), Expect = 5e-08
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKK-VHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPF 692
V+ GG+ + +A + H+VVG+PGR++ L ++L V+ VLDE D++++ F
Sbjct: 128 VLTGGMPLGPQLASLEAHDPHVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGF 187
Query: 693 LNDINYIFSALPNHKQVIMSSATFQNIAR 779
I I S H+Q ++ SATF +I R
Sbjct: 188 EEPIREIASRCDKHRQSLLFSATFPDIIR 216
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVMI 432
G+ + G+ +P+Q +P G D++ +A +G+GKT F + L+KL+ Q ++
Sbjct: 40 GIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALV 99
Query: 433 LTPTREIAAQICDVIKQIGS 492
L PTRE+A Q+ ++++ +
Sbjct: 100 LCPTRELADQVGKQLRKLAT 119
>UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5;
Clostridium|Rep: DEAD/DEAH box helicase-like -
Clostridium cellulolyticum H10
Length = 437
Score = 60.5 bits (140), Expect = 5e-08
Identities = 29/90 (32%), Positives = 54/90 (60%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
++G +++ I K K K HI+VG+PGR+ LI I+ ++ ++DE D+L++ L+
Sbjct: 107 IIGDVNIMRQIDKLKLKPHIIVGTPGRILELIQKRKISAHTIKTIIIDEADRLLDDYNLD 166
Query: 699 DINYIFSALPNHKQVIMSSATFQNIARKSI 788
+I I +Q++M SAT I++K++
Sbjct: 167 NIKAIIKTTLKERQIVMCSAT---ISKKTV 193
Score = 42.7 bits (96), Expect = 0.010
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 283 PSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL-NNGLQVMILTPTREIAA 459
P+ IQ +P D++L + +GTGKT+ + + KL+ +Q +IL PT E+A
Sbjct: 26 PTDIQQKAIPEALKNRDVILHSSTGTGKTLAYLLPLFMKLSAEKKEMQALILVPTHELAI 85
Query: 460 QICDVIKQIGSH 495
Q+ I+ + +
Sbjct: 86 QVVRQIELLSQN 97
>UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 685
Score = 60.5 bits (140), Expect = 5e-08
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI-------IALEKLNLN 411
R L GFQ PS +Q +PL G D+L +A++G+GKT +SI +A EK N+
Sbjct: 36 RALKKMGFQNPSLVQSKSIPLSLQGKDILAKARTGSGKTAAYSIPIIQKVLMAKEKSNI- 94
Query: 412 NGLQVMILTPTREIAAQICDVIKQIGSHHKGLMS 513
G++ ++L PTRE+ Q+ + Q+ + + L+S
Sbjct: 95 KGVKAVVLVPTRELCEQVKNHFNQVSYYCQQLVS 128
Score = 37.9 bits (84), Expect = 0.29
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 576 IVVGSPGRLKHLIVGNHINL-SDVQLFVLDECDKLVEKPFLNDINYIFSALPNHKQVIMS 752
++V +P RL + I L S + + V+DE D ++ NDIN I S LP Q +
Sbjct: 151 VIVSTPTRLVQHLENKTIQLQSTLDILVIDEADLVLNYGHQNDINIIKSFLPKVCQCFLM 210
Query: 753 SAT 761
SAT
Sbjct: 211 SAT 213
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 60.5 bits (140), Expect = 5e-08
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
VV GG SV + +K H+VVG+PGRL I INLS V+ +LDE D++++ F
Sbjct: 382 VVYGGTSVGYQARELEKGAHVVVGTPGRLLDFIGKGKINLSKVKYLILDEADRMLDMGFE 441
Query: 696 NDINYIFSA--LP--NHKQVIMSSATF 764
+I + + +P +Q +M SATF
Sbjct: 442 PEIRKLVTTFDMPEKGQRQTLMFSATF 468
Score = 35.1 bits (77), Expect = 2.1
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 12/76 (15%)
Frame = +1
Query: 274 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQ---------- 423
+ +P+PIQ +P+ G DL+ A++G+GKT F + L + N+ ++
Sbjct: 290 YDRPTPIQKWAIPIVLSGKDLMGCAQTGSGKTAAFLLPVLTGIIKNDLIEGGSGFGGPQY 349
Query: 424 --VMILTPTREIAAQI 465
+I+ PTRE+ QI
Sbjct: 350 PAAIIVGPTRELVNQI 365
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 60.5 bits (140), Expect = 5e-08
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN---GLQ 423
R + S GF P+PIQ +P G D++ +K+G+GKT F I + KL ++ G++
Sbjct: 23 RAIKSQGFNVPTPIQRKAIPQILAGRDIVACSKTGSGKTAAFLIPLINKLQNHSTVVGIR 82
Query: 424 VMILTPTREIAAQICDVIKQI 486
+IL PTRE+A QI V+K +
Sbjct: 83 GLILLPTRELALQIASVLKAL 103
Score = 50.0 bits (114), Expect = 7e-05
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +3
Query: 504 SDVE--VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
SD++ +++GG I++ +PGR+ ++ + + LS VQ+ + DE D L
Sbjct: 107 SDIQYSIMVGGHGFEGQFESLASNPDILICTPGRVLQHLLEDRLKLSRVQMVIYDEADFL 166
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSAT 761
E + + I S LP+ KQ +M SAT
Sbjct: 167 FEMGLADQLKQILSHLPSQKQSLMFSAT 194
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 60.5 bits (140), Expect = 5e-08
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN----GLQVMILT 438
G++KP+PIQ +PL G DL A +G+GKT F++ LE+L +V+ILT
Sbjct: 186 GYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATRVLILT 245
Query: 439 PTREIAAQICDVIKQI 486
PTRE+A QI +I+ +
Sbjct: 246 PTRELAVQIHSMIQNL 261
Score = 56.8 bits (131), Expect = 6e-07
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRL-KHLIVGNHINLSDVQLFVLDECDKLVEKPF 692
+++GGLSV E + IVV +PGR+ HL ++L D+ + +LDE D+L++ F
Sbjct: 271 LIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGF 330
Query: 693 LNDINYIFSALPNHKQVIMSSAT 761
+I + P +Q ++ SAT
Sbjct: 331 ATEITELVRLCPKRRQTMLFSAT 353
>UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase mak5 - Schizosaccharomyces pombe (Fission
yeast)
Length = 648
Score = 60.5 bits (140), Expect = 5e-08
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = +1
Query: 217 YVHFHASFRIYTRGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 396
+ HF S + L +GF KP PIQ +P GFD++ +A +G+GKT+ F I LE
Sbjct: 124 WAHFSLSPEMLG-SLSKAGFSKPMPIQSLVIPEASIGFDIIGKADTGSGKTLAFGIPILE 182
Query: 397 KLNLN---NGLQVMILTPTREIAAQIC 468
N +Q +++ PTRE+A QIC
Sbjct: 183 HCLRNVDAKYVQALVVAPTRELAHQIC 209
Score = 52.0 bits (119), Expect = 2e-05
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHI--NLSDVQLFVLDECDKLVEKPF 692
+ GGL+V + K H+VV +PGRL +I N++ N ++ VLDE D+L++K
Sbjct: 226 ITGGLAVQKQQRLLNKHPHVVVATPGRLWSVINENNLTGNFKKIKCLVLDEADRLLQKSH 285
Query: 693 LNDINYIFSALPN----HKQVIMSSATF 764
+++ + L N +Q + SATF
Sbjct: 286 FEELSKLLEILGNPMHTQRQTFIFSATF 313
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 60.5 bits (140), Expect = 5e-08
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPL--GKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN--NGLQ 423
GL++ F+KPS IQ +PL +++ +++SGTGKT F + L +++ N N Q
Sbjct: 110 GLLAMNFKKPSKIQARALPLMLSNPPRNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQ 169
Query: 424 VMILTPTREIAAQICDVIKQIGSHHKGLM 510
+ L P+RE+A QI VI+ IG GL+
Sbjct: 170 ALALAPSRELARQIQSVIQSIGQFCTGLV 198
Score = 43.6 bits (98), Expect = 0.006
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +3
Query: 567 KVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLND-INYIFSALPNHKQV 743
K ++VVG+PG + LI ++S ++L V+DE D ++++ L + + + LP Q
Sbjct: 214 KANVVVGTPGTVMDLIRRRQFDVSQLKLLVVDEADNMLDQQGLGEQCVRVKNMLPKTIQT 273
Query: 744 IMSSATFQNIARKSICKF 797
++ SATF + + KF
Sbjct: 274 LLFSATFPDHVKSYAEKF 291
>UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4;
Mollicutes|Rep: ATP-dependent RNA helicase - Mesoplasma
florum (Acholeplasma florum)
Length = 460
Score = 60.1 bits (139), Expect = 6e-08
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKF-KKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEK 686
V++ +GG +N+ I K++ I VG+P R+K L NH+ + ++DECD + +
Sbjct: 109 VDLFIGGEDINKQIESLNKRQPTIAVGTPTRIKELYEQNHLKATTSDYIIIDECDMIFDL 168
Query: 687 PFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
F+ D++++ S + + M SAT R + K+
Sbjct: 169 GFIEDVDFVVSKAKQNVNLSMFSATIPEQLRPFVSKY 205
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = +1
Query: 274 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN---NGLQVMILTPT 444
F+ P+ IQ +PL K +++ + +GTGKT F + L L + +Q +I+ PT
Sbjct: 27 FETPTRIQAEIIPLIKKHQNVIALSHTGTGKTHAFLLPILNNLRFDQDKKNVQALIIAPT 86
Query: 445 REIAAQICDVIK 480
RE+A QI D +K
Sbjct: 87 RELAKQIFDNVK 98
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 60.1 bits (139), Expect = 6e-08
Identities = 30/96 (31%), Positives = 52/96 (54%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKP 689
V V GG+ + + + I+V +PGRL LI + L DV++FVLDE D++++
Sbjct: 110 VNAVFGGVPIGRQMRMLDRGTDILVATPGRLLDLIDQRALVLKDVEVFVLDEADQMLDLG 169
Query: 690 FLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
F++ + I LP ++Q + SAT ++ +F
Sbjct: 170 FIHALRRIDKLLPKNRQTLFFSATMPKTIQELSSQF 205
Score = 53.2 bits (122), Expect = 7e-06
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN------NGLQVMI 432
G+ KP+PIQ +P G DL A++GTGKT F++ ++ L N G +++I
Sbjct: 25 GYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFALPSIHYLATNPQARPQRGCRMLI 84
Query: 433 LTPTREIAAQICDVIKQIGSH 495
L+PTRE+A+QI H
Sbjct: 85 LSPTRELASQIARACNDYTRH 105
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 60.1 bits (139), Expect = 6e-08
Identities = 29/81 (35%), Positives = 47/81 (58%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
V GG S+ + +K +VV +PGRL LI ++LS V VLDE D++++ F +
Sbjct: 106 VYGGASIVSQTEELRKGAQVVVATPGRLHDLIRRGAVDLSGVSWVVLDEADEMLQMGFQD 165
Query: 699 DINYIFSALPNHKQVIMSSAT 761
++N I + P+ K ++ SAT
Sbjct: 166 ELNAILAVTPDSKNTLLFSAT 186
Score = 42.3 bits (95), Expect = 0.014
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Frame = +1
Query: 232 ASFRIYT---RGLISSGFQKPSPIQLHGVPLG-KCGFDLLLEAKSGTGKTVVFSIIALEK 399
A F I T +GL GF +P+Q +P+ DL+ A++GTGKT F I ++
Sbjct: 5 AEFEINTDIMKGLDGLGFSVMTPVQEKIIPIVLNRQTDLVGLAQTGTGKTAAFGIPLIQL 64
Query: 400 LNLN-NGLQVMILTPTREIAAQICDVIKQIGSH 495
+ Q ++L PTRE+ Q+ + +G +
Sbjct: 65 TDTRLKRTQALVLCPTRELCVQVAGDLNLMGRY 97
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 60.1 bits (139), Expect = 6e-08
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE-----KLNLNNG 417
+ L +GF +P+ IQ +P G D+L A++GTGKT F I L K + +
Sbjct: 14 KSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLNTLINVKKSEHTD 73
Query: 418 LQVMILTPTREIAAQICDVIKQIGSH 495
+ +++ PTRE+A QI +V K+IG++
Sbjct: 74 ISCLVMAPTRELAVQISEVFKKIGAY 99
Score = 57.2 bits (132), Expect = 4e-07
Identities = 29/88 (32%), Positives = 46/88 (52%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
+ GG+ IA + I+V +PGR+ LI HI ++ V++ VLDE D +++ F+
Sbjct: 107 ITGGVEQEAQIAAADYGIDILVATPGRMFDLIYQKHIKITRVKILVLDEADHMLDLGFIK 166
Query: 699 DINYIFSALPNHKQVIMSSATFQNIARK 782
DI + LP Q + SAT +K
Sbjct: 167 DIQDVKKFLPARHQTLFFSATINEEIKK 194
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 60.1 bits (139), Expect = 6e-08
Identities = 27/82 (32%), Positives = 51/82 (62%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
+++GG S+N+ K V +++ +PGRL L + L+D ++ V+DE D++++ F+
Sbjct: 327 LLIGGESMNDQRDVLSKGVDVLIATPGRLIDLFDRGGLLLTDTRILVIDEADRMLDMGFI 386
Query: 696 NDINYIFSALPNHKQVIMSSAT 761
D+ I S LP+++Q + SAT
Sbjct: 387 PDVERIVSLLPHNRQTLFFSAT 408
Score = 50.0 bits (114), Expect = 7e-05
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGL---- 420
R + G+ P+PIQ +P+ G D+L A++GTGKT F++ ++ L+
Sbjct: 236 RAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMDILSDRRARARMP 295
Query: 421 QVMILTPTREIAAQICDVIKQIGSHHK 501
+ +IL PTRE+A Q+ + + G + K
Sbjct: 296 RSLILEPTRELALQVAENFVKYGQYLK 322
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 60.1 bits (139), Expect = 6e-08
Identities = 31/85 (36%), Positives = 47/85 (55%)
Frame = +3
Query: 507 DVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEK 686
DV V GG I K+ +VVG+PGR+ LI ++LS V++ VLDE D+++
Sbjct: 144 DVVPVYGGSPYGPQIGALKRGAQVVVGTPGRVIDLIEKGALDLSHVRMLVLDEADEMLRM 203
Query: 687 PFLNDINYIFSALPNHKQVIMSSAT 761
F D+ I S+ P+ + + SAT
Sbjct: 204 GFAEDVETIASSAPDDRLTALFSAT 228
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTR 447
GF+ P+PIQ +P D++ A++GTGKT F + L ++ + +Q ++L PTR
Sbjct: 64 GFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKTAAFGLPLLAIVDADERNVQALVLAPTR 123
Query: 448 EIAAQICDVIKQIGS 492
E+A Q I+ +
Sbjct: 124 ELAMQSAQAIEDFAA 138
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 60.1 bits (139), Expect = 6e-08
Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Frame = +1
Query: 235 SFRIY---TRGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL- 402
SFR + T G+ G+ P+PIQ +P G D++ A++GTGKT F + L++L
Sbjct: 5 SFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQRLM 64
Query: 403 -NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLMS 513
++ MI+TPTRE+A QI VI+ +G + GL S
Sbjct: 65 RGPRGRVRAMIVTPTRELAEQIQGVIEALGK-YTGLRS 101
Score = 50.4 bits (115), Expect = 5e-05
Identities = 25/85 (29%), Positives = 42/85 (49%)
Frame = +3
Query: 525 GGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLNDI 704
GG+ I + ++ V I V PGRL + + L + + +LDE D++ + FL D+
Sbjct: 106 GGVGYQGQIQRLRRGVEIAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFDMGFLPDV 165
Query: 705 NYIFSALPNHKQVIMSSATFQNIAR 779
I P +Q ++ SAT + R
Sbjct: 166 RRILRLAPAQRQTMLFSATMPDAIR 190
>UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=1; Pseudoalteromonas tunicata D2|Rep:
ATP-dependent RNA helicase, DEAD box family protein -
Pseudoalteromonas tunicata D2
Length = 416
Score = 60.1 bits (139), Expect = 6e-08
Identities = 31/88 (35%), Positives = 49/88 (55%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
V GG+ + + +FK+ IVV +P RL L+ +L V+ FV+DE D+LV +
Sbjct: 110 VFGGVRIPSQVNRFKRGADIVVATPRRLVDLLKVKAFSLEQVKHFVMDEADRLVSMGIVA 169
Query: 699 DINYIFSALPNHKQVIMSSATFQNIARK 782
++ I +A+P KQ I+ SAT +K
Sbjct: 170 ELRTILAAMPQAKQQILFSATDSKALQK 197
Score = 44.8 bits (101), Expect = 0.003
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL--NNGLQV-- 426
++S G++ P+ IQ H + G D A +GTGKT + + L++L+ N+ QV
Sbjct: 17 VLSLGYKSPTYIQEHSIGAVLSGTDTYAIAPTGTGKTAAYLLPTLQELSRVDNSAEQVRP 76
Query: 427 ---MILTPTREIAAQICDVIKQIG 489
+ L PTRE+A Q+ + I + G
Sbjct: 77 VRALFLVPTRELAVQVEESIAKYG 100
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 60.1 bits (139), Expect = 6e-08
Identities = 31/88 (35%), Positives = 48/88 (54%)
Frame = +3
Query: 498 QGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKL 677
Q +V V GG + + K K+ HIVVG+PGR+ L+ + L ++ VLDE D++
Sbjct: 101 QRINVVAVYGGKPLRSQMEKLKRAPHIVVGTPGRVIDLMTRRALQLEMLRTVVLDEADRM 160
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSAT 761
++ F DI I P +Q ++ SAT
Sbjct: 161 LDIGFRPDIEKILRRCPEERQTLLLSAT 188
Score = 59.7 bits (138), Expect = 8e-08
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN---LNNGLQVM 429
L ++ + +PSPIQ +PL G D+L +A++GTGKT F I +E+L + Q +
Sbjct: 19 LEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIERLEHGPNSRNPQAL 78
Query: 430 ILTPTREIAAQICDVIKQI 486
ILTPTRE+A Q+ D I ++
Sbjct: 79 ILTPTRELAVQVRDEIAKL 97
>UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 755
Score = 60.1 bits (139), Expect = 6e-08
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNH-INLSDVQLFVLDECDKLVEKPF 692
+V+GGLS N A + + IVV +PGR+ + H L D+ +LDE D+L+E F
Sbjct: 253 LVVGGLSANVQAAALRTRPEIVVATPGRVIDHVRNTHSFGLEDLATLILDEADRLLEMGF 312
Query: 693 LNDINYIFSALPNHKQVIMSSAT 761
L +I I P +Q ++ SAT
Sbjct: 313 LEEIKEIVRQCPKKRQTLLFSAT 335
Score = 55.6 bits (128), Expect = 1e-06
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Frame = +1
Query: 211 KCYVHFHASFRIYTRGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 390
K + H S R TR + G++KP+PIQ +P+ G D+ A +G+GKT F +
Sbjct: 148 KAFDELHLS-RPLTRACEALGYKKPTPIQAAVIPIAMTGRDVCGRAVTGSGKTAAFMLPQ 206
Query: 391 LEKLNLNNG------LQVMILTPTREIAAQI 465
LE++ L+ G V++L PTRE+A Q+
Sbjct: 207 LERM-LHRGPRPAAATHVLVLVPTRELAVQV 236
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 60.1 bits (139), Expect = 6e-08
Identities = 28/82 (34%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN---GLQ 423
RG+ G++ P+PIQ +PL G D+ A++G+GKT F + +++L ++ G++
Sbjct: 62 RGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQRLRRHDAGAGIR 121
Query: 424 VMILTPTREIAAQICDVIKQIG 489
+IL+PTR++A Q +Q+G
Sbjct: 122 ALILSPTRDLATQTLKFAQQLG 143
Score = 46.8 bits (106), Expect = 6e-04
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL-KHLIVGNHINLSDVQLFVLDECDKLVEK 686
+ +++GG S+ + + I++ +PGRL HL +NL V+ V DE D L
Sbjct: 150 ISLIVGGDSMESQFEELAENPDIIIATPGRLVHHLAEVEDLNLRTVEYVVFDEADSLFSL 209
Query: 687 PFLNDINYIFSALPNHKQVIMSSAT 761
+ ++ I L + +Q ++ SAT
Sbjct: 210 GLIQQLHDILHKLSDTRQTLLFSAT 234
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 60.1 bits (139), Expect = 6e-08
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = +1
Query: 229 HASF-RIYTRGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI-IALEKL 402
H S + L SG++ P+PIQ+ +P+G G D+L A +G+GKT F + + + L
Sbjct: 207 HCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRAL 266
Query: 403 NLNNGLQVMILTPTREIAAQICDVIKQIGS 492
+ +ILTPTRE+A QI K++ S
Sbjct: 267 FESKTPSALILTPTRELAIQIERQAKELMS 296
Score = 53.2 bits (122), Expect = 7e-06
Identities = 24/82 (29%), Positives = 48/82 (58%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
+++GGL + + + ++ V +++ +PGRL +I + + L V++ V+DE D +++ F
Sbjct: 305 LLVGGLPLPPQLYRLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQ 364
Query: 696 NDINYIFSALPNHKQVIMSSAT 761
+ I +PN Q I+ SAT
Sbjct: 365 QQVLDILENIPNDCQTILVSAT 386
>UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Saccharomyces cerevisiae (Baker's yeast)
Length = 995
Score = 60.1 bits (139), Expect = 6e-08
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Frame = +3
Query: 498 QGSDVEVVM--GGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECD 671
+G+++ V+ GG S+ E +++ +PGR HL V +++L V+ V DE D
Sbjct: 232 RGTELRSVLLTGGDSLEEQFGMMMTNPDVIIATPGRFLHLKVEMNLDLKSVEYVVFDEAD 291
Query: 672 KLVEKPFLNDINYIFSALPNHKQVIMSSATFQN 770
+L E F +N + ++LP +Q ++ SAT N
Sbjct: 292 RLFEMGFQEQLNELLASLPTTRQTLLFSATLPN 324
Score = 53.6 bits (123), Expect = 5e-06
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +1
Query: 241 RIYTRGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-- 414
+I + GF++P+PIQ +PL D++ A++G+GKT F + +EKL ++
Sbjct: 146 KIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVEKLKSHSGK 205
Query: 415 -GLQVMILTPTREIAAQICDVIK 480
G + +IL+P+RE+A Q +V K
Sbjct: 206 IGARAVILSPSRELAMQTFNVFK 228
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 59.7 bits (138), Expect = 8e-08
Identities = 28/77 (36%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL-NNGLQVMIL 435
++ GF++ SPIQ +P+ G D++ A++GTGKT F+I +E L + + LQ +IL
Sbjct: 24 ILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIELLEVESKHLQALIL 83
Query: 436 TPTREIAAQICDVIKQI 486
PTRE+ Q+ + +++
Sbjct: 84 CPTRELVIQVSEQFRKL 100
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/97 (28%), Positives = 51/97 (52%)
Frame = +3
Query: 507 DVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEK 686
+V + GG + + +K IV+ +PGR+ + I+L ++++ VLDE D++++
Sbjct: 108 EVVPIYGGQEIERQLRALRKNPQIVIATPGRMMDHMRRGSIHLDEIKIVVLDEADEMLDM 167
Query: 687 PFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
F D+ +I P +Q IM SAT + + KF
Sbjct: 168 GFREDMEFILKDTPADRQTIMFSATMTDDVLTLMKKF 204
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 59.7 bits (138), Expect = 8e-08
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Frame = +1
Query: 274 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL----NLNNGLQVMILTP 441
+ KP+PIQ +P D+L A +GTGKT F + AL+ L + +V+IL P
Sbjct: 21 YHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPALQFLLDDPRPSRKPRVLILAP 80
Query: 442 TREIAAQICDVIKQIGSH 495
TRE+A QI V+KQ+G+H
Sbjct: 81 TRELAFQIHKVVKQLGAH 98
Score = 57.2 bits (132), Expect = 4e-07
Identities = 30/94 (31%), Positives = 54/94 (57%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
VV GG + ++ + + K+ I+V +PGRL +++ I+LSD++L ++DE D++++
Sbjct: 105 VVTGGFASDKQLEILQSKIDILVATPGRLLNIMSKEFIDLSDIELLIIDEADRMLDMGQG 164
Query: 696 NDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
D+ + A+P Q SAT +A I KF
Sbjct: 165 PDVLALIEAIPGDFQAACFSAT---LAGSGITKF 195
>UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Exiguobacterium sibiricum
255-15|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Exiguobacterium sibiricum 255-15
Length = 391
Score = 59.7 bits (138), Expect = 8e-08
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTRE 450
F+K P+Q +PL + D+L+EA +GTGKT+ + I ALE ++ N +QV+I PTRE
Sbjct: 17 FEKMMPVQEQAIPLLRERKDVLVEAPTGTGKTLAYVIPALELIDENEPHIQVVITAPTRE 76
Query: 451 IAAQICDVIKQIGSHHKGLMS 513
+ QI VI Q+ S G+ S
Sbjct: 77 LVMQIHQVI-QLFSQGSGIKS 96
Score = 53.2 bits (122), Expect = 7e-06
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 498 QGSDVE--VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECD 671
QGS ++ +GG+ + + KKK I+VG+PGRL LI + + V+L VLDE D
Sbjct: 90 QGSGIKSGAFIGGVELKRQHERLKKKPQIIVGTPGRLVELIDSKKMKMHKVKLIVLDEAD 149
Query: 672 KLVEKPFLNDINYIFSALPNHKQVIMSSAT 761
++ E I ++ +Q+ SAT
Sbjct: 150 QIYESGMSASATRIANSALRDRQLAFISAT 179
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 59.7 bits (138), Expect = 8e-08
Identities = 30/82 (36%), Positives = 48/82 (58%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
VV GG+SV I + V I+V +PGRL L+ I+L + + +LDE D++++ F+
Sbjct: 110 VVFGGVSVRPQIQALARGVDILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMGFV 169
Query: 696 NDINYIFSALPNHKQVIMSSAT 761
D+ I P+ +Q +M SAT
Sbjct: 170 RDVMKIVGKCPDDRQSMMFSAT 191
Score = 51.2 bits (117), Expect = 3e-05
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Frame = +1
Query: 250 TRGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNG---- 417
TR L P+PIQ +P G D+L A++GTGKT F++ L L G
Sbjct: 16 TRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLHHLMTVGGKPTT 75
Query: 418 --LQVMILTPTREIAAQICDVIKQI 486
+ +IL+PTRE+A QI + I +
Sbjct: 76 RTTKALILSPTRELAVQIAESIADL 100
>UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein;
n=31; Actinobacteria (class)|Rep: DEAD/DEAH box helicase
domain protein - Mycobacterium sp. (strain KMS)
Length = 507
Score = 59.7 bits (138), Expect = 8e-08
Identities = 29/81 (35%), Positives = 44/81 (54%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
+ GG I +K +VVG+PGRL L H+ L + + VLDE D++++ FL
Sbjct: 122 IYGGRPYEPQIESLRKGADVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDLGFLP 181
Query: 699 DINYIFSALPNHKQVIMSSAT 761
DI I P+ +Q ++ SAT
Sbjct: 182 DIERILRQTPDTRQAMLFSAT 202
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-----NG 417
R L G +P IQ +P+ G DL+ +A++G GKT F + L+++ + +G
Sbjct: 23 RALAEEGIHQPFAIQELTLPMALAGDDLIGQARTGMGKTYAFGVPLLQRVTTDTEKELSG 82
Query: 418 L-QVMILTPTREIAAQI 465
+ + +I+ PTRE+ Q+
Sbjct: 83 IPRALIVVPTRELCLQV 99
>UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Pseudomonas putida W619
Length = 621
Score = 59.7 bits (138), Expect = 8e-08
Identities = 28/91 (30%), Positives = 50/91 (54%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
+V GG E A +K +++G+PGRL + +++LS VQ+ +LDE D++++ F
Sbjct: 286 LVTGGEDFKEQAAMLRKVPDVLIGTPGRLLEQLNAGNLDLSHVQVMILDEADRMLDMGFA 345
Query: 696 NDINYIFSALPNHKQVIMSSATFQNIARKSI 788
D+ + N +Q ++ SAT A + I
Sbjct: 346 EDMERLCKECENREQTLLFSATTGGAALRDI 376
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Frame = +1
Query: 274 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQV----MILTP 441
F +P+P+Q +PL G DL + A++G+GKT F + L +L G +V +IL P
Sbjct: 202 FVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPLLNRLVDLKGARVEIRALILLP 261
Query: 442 TREIAAQ 462
TRE+A Q
Sbjct: 262 TRELAQQ 268
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 59.7 bits (138), Expect = 8e-08
Identities = 27/87 (31%), Positives = 48/87 (55%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
+ GG + + + ++ HIVV +PGRL I I+L+ + VLDE D+++ F++
Sbjct: 112 IFGGADMRQQLKSLREGTHIVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLRMGFID 171
Query: 699 DINYIFSALPNHKQVIMSSATFQNIAR 779
D++ I + P ++V + SAT R
Sbjct: 172 DVDTILAKTPKERKVALFSATMPKRVR 198
Score = 53.6 bits (123), Expect = 5e-06
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMIL 435
L S G++ +PIQ +PL G D++ A++GTGKT F++ L +++ Q ++L
Sbjct: 24 LQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILANIDVKVRSPQALVL 83
Query: 436 TPTREIAAQICDVIKQIGSHHKGL 507
PTRE+A Q+ + + G GL
Sbjct: 84 CPTRELAQQVAEAFRSYGRGMGGL 107
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 59.7 bits (138), Expect = 8e-08
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-NLNNGLQVMI 432
GL G++ PS IQ +PL D+L +K+GTGKT+ F I L+ + + + G++ +I
Sbjct: 29 GLNDLGYEHPSLIQEKIIPLAINNKDILARSKNGTGKTLSFLIPILQNIYSESYGIESII 88
Query: 433 LTPTREIAAQICDVIKQIGSHHKGL 507
L PTRE+A QI +++++ + K +
Sbjct: 89 LVPTRELALQISSLLRKLSKYMKNI 113
>UniRef50_Q7R850 Cluster: ATP-dependent RNA helicase; n=1;
Plasmodium yoelii yoelii|Rep: ATP-dependent RNA helicase
- Plasmodium yoelii yoelii
Length = 634
Score = 59.7 bits (138), Expect = 8e-08
Identities = 26/70 (37%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLI-----VGNHINLSDVQLFVLDECDKLVE 683
++GGL++N+ + KK I++ +PGRLK+ + + N+ +V+ FV DE DK++E
Sbjct: 203 IIGGLNINKQLRLISKKPEIIICTPGRLKYFLQLEDKINYLYNMKNVRYFVCDEVDKMIE 262
Query: 684 KPFLNDINYI 713
F+NDI++I
Sbjct: 263 TSFINDIHFI 272
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 59.7 bits (138), Expect = 8e-08
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN--GLQV 426
+ + GF +P+PIQ +P G D++ +++G+GKT F I L+KL + G++
Sbjct: 37 KAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRA 96
Query: 427 MILTPTREIAAQICDVIKQIG 489
++++PTRE+A Q V+K++G
Sbjct: 97 LMVSPTRELALQTFKVVKELG 117
Score = 56.0 bits (129), Expect = 1e-06
Identities = 27/81 (33%), Positives = 44/81 (54%)
Frame = +3
Query: 519 VMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLN 698
++GG + E + + I++ +PGRL H+IV + LS VQ V DE D+L E F +
Sbjct: 127 LVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQD 186
Query: 699 DINYIFSALPNHKQVIMSSAT 761
+ +P +Q ++ SAT
Sbjct: 187 QLTETLKRIPESRQTLLFSAT 207
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 59.7 bits (138), Expect = 8e-08
Identities = 32/91 (35%), Positives = 49/91 (53%)
Frame = +3
Query: 525 GGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFLNDI 704
GGL + + V IV+G+PGRL L+ +H LS VQ VLDE D++++ F+ I
Sbjct: 220 GGLGKIDQSRILRNGVDIVIGTPGRLNDLLRKHH--LSSVQYLVLDEADRMLDMGFMPQI 277
Query: 705 NYIFSALPNHKQVIMSSATFQNIARKSICKF 797
+ +P +Q +M SAT+ + KF
Sbjct: 278 ESLIDQIPKERQTLMFSATWPKEVKLLASKF 308
Score = 40.7 bits (91), Expect = 0.041
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Frame = +1
Query: 262 ISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-------NLNNGL 420
I GF P+ IQ P+ G DL+ A +G+GKT+ F + AL K+ +
Sbjct: 126 IFQGFTAPTVIQGQSWPIILGGNDLVGLAATGSGKTLAFLLPALLKIISLPKRPSYGATP 185
Query: 421 QVMILTPTREIAAQICDVIK 480
V+++ PTRE+A QI +V K
Sbjct: 186 LVLVMAPTRELAQQIEEVCK 205
>UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:
VASA RNA helicase - Moina macrocopa
Length = 843
Score = 59.7 bits (138), Expect = 8e-08
Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLVEKPFL 695
+V GG V+ + +I+VG+PGRLK + I+ S+VQ F+LDE D++++ F
Sbjct: 519 IVYGGTQVSHQKSSLMNGCNILVGTPGRLKDFVDKGFIDFSNVQFFILDEADRMLDMGFG 578
Query: 696 NDINYIF---SALPNHKQV-IMSSATFQNIARKSICKF 797
+DI +I + P ++V +M SATF + +K K+
Sbjct: 579 SDIEFIAQHPTMTPVGRRVTLMFSATFPDDVQKIAGKY 616
Score = 41.9 bits (94), Expect = 0.018
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Frame = +1
Query: 265 SSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI----IALEK--LNLNNG--- 417
+SG+ KP+P+Q + + DL+ A +G+GKT F + I LEK +G
Sbjct: 426 ASGYTKPTPVQKGAIAVVLARRDLIASAVTGSGKTAAFLVPVVNILLEKQVQGAPSGEVQ 485
Query: 418 -LQVMILTPTREIAAQICDVIKQIGSHHKGLMS 513
+V+I++PTRE+A QI ++ SH+ L S
Sbjct: 486 KPEVVIISPTRELAIQIHREARKF-SHNSVLKS 517
>UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5;
Trypanosomatidae|Rep: DEAD box RNA helicase, putative -
Leishmania major
Length = 527
Score = 59.7 bits (138), Expect = 8e-08
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLK-HLIVGNHINLSDVQLFVLDECDKL 677
G V ++GG + E + K+ H+VVG+PGR+K HL L + VLDE DK+
Sbjct: 151 GLRVATLVGGADMVEQACELSKRPHVVVGTPGRVKDHLSNTKGFKLVKLHALVLDEADKM 210
Query: 678 VEKPFLNDINYIFSALPNHKQVIMSSAT 761
++ + +I+ I LP +++ ++ SAT
Sbjct: 211 LDMNYEKEIDAILEQLPQNRRTMLFSAT 238
Score = 38.7 bits (86), Expect = 0.17
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Frame = +1
Query: 268 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNG---LQVMILT 438
+G+Q P+ IQ + + G DL+ A++G+GKT +++ + L L V+++
Sbjct: 71 AGWQHPTRIQASTITVFAEGRDLIGVAQTGSGKTGAYALPLVNWLLAQRKTPYLSVLVMV 130
Query: 439 PTREIAAQI 465
PTRE+A Q+
Sbjct: 131 PTRELAQQV 139
>UniRef50_A7ECJ8 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 688
Score = 59.7 bits (138), Expect = 8e-08
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Frame = +3
Query: 510 VEVVMGGLSVNEDIAKFKKK-VHIVVGSPGRLKHLIVGNHINLSDVQL--FVLDECDKLV 680
V+V +GG S E + K +++ HI+VG+PGRL+ L++ + +S L VLDE D+L+
Sbjct: 194 VQVAVGGSSKREMLRKVQREGCHILVGTPGRLQDLLMDEYSQVSAPGLTTLVLDEADRLL 253
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATFQNIARKSICK 794
+ F DI I + LPN K+V + F + + +
Sbjct: 254 DDGFSKDIENIEALLPNRKEVDRQTLLFSATVPREVMR 291
>UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 32 - Oryza sativa subsp. japonica (Rice)
Length = 773
Score = 59.7 bits (138), Expect = 8e-08
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Frame = +1
Query: 256 GLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-----NLNNGL 420
GL +G+ + S IQ +P CG D+L AK+G+GKT+ F I LEKL +G+
Sbjct: 94 GLRKAGYTEMSEIQRAALPHALCGRDVLGAAKTGSGKTLAFVIPVLEKLYRERWGPEDGV 153
Query: 421 QVMILTPTREIAAQICDVIKQIGSHH 498
++L+P +++A QI +V +++G H
Sbjct: 154 GCIVLSPNKDLAGQIFNVFQKVGKLH 179
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/66 (33%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = +3
Query: 570 VHIVVGSPGRL-KHLIVGNHINLSDVQ-LFVLDECDKLVEKPFLNDINYIFSALPNHKQV 743
++I+V +PGRL +H+ + + S +Q + V+DE D++++K F ++ + S LP +Q
Sbjct: 203 MNILVCTPGRLLQHMGETTNFDCSQIQQILVIDEADQVLDKNFQEQVDNVVSQLPKVRQT 262
Query: 744 IMSSAT 761
++ SAT
Sbjct: 263 LLFSAT 268
>UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=4; Tetrapoda|Rep: Probable ATP-dependent RNA helicase
DDX59 - Rattus norvegicus (Rat)
Length = 589
Score = 59.7 bits (138), Expect = 8e-08
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +1
Query: 229 HASF-RIYTRGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI-IALEKL 402
H F + L SG++ P+PIQ+ +P+G G D+L A +G+GKT F + + + L
Sbjct: 207 HCGFPETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIIRAL 266
Query: 403 NLNNGLQVMILTPTREIAAQI 465
+ +ILTPTRE+A QI
Sbjct: 267 PEDKTPSALILTPTRELAIQI 287
>UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX49;
n=34; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX49 - Homo sapiens (Human)
Length = 483
Score = 59.7 bits (138), Expect = 8e-08
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Frame = +3
Query: 495 PQGSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL-KHLIVGNHINLSDVQLFVLDECD 671
P G +++GG+ + + +K H+V+ +PGRL HL N ++ ++ V+DE D
Sbjct: 96 PLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEAD 155
Query: 672 KLVEK---PFLNDINYIFSALPNHKQVIMSSATFQNIARK 782
+L+E+ F D+ I +A+P +Q ++ SAT + R+
Sbjct: 156 RLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRE 195
Score = 56.4 bits (130), Expect = 8e-07
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTR 447
G ++P+P+QL +P G D L AK+G+GKT F + L+KL+ + G+ ++LTPTR
Sbjct: 21 GLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPYGIFCLVLTPTR 80
Query: 448 EIAAQICDVIKQIG 489
E+A QI + + +G
Sbjct: 81 ELAYQIAEQFRVLG 94
>UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DBP4 - Encephalitozoon cuniculi
Length = 452
Score = 59.7 bits (138), Expect = 8e-08
Identities = 29/83 (34%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +3
Query: 516 VVMGGLSVNEDIAKFKKKVHIVVGSPGRL-KHLIVGNHINLSDVQLFVLDECDKLVEKPF 692
++MGGL +++ K + ++I+V +PGRL +HL +++ ++VQ+ +LDE DK++E F
Sbjct: 109 LIMGGLEAEDELLKVNQ-MNILVCTPGRLLQHLQENPYLSTANVQILILDEADKMIEMGF 167
Query: 693 LNDINYIFSALPNHKQVIMSSAT 761
+ I +P KQ ++ SAT
Sbjct: 168 KEVLEDILEYIPQKKQTLLFSAT 190
Score = 57.6 bits (133), Expect = 3e-07
Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-----NLNNG 417
+GL +GF +Q +P+ G D++ +++GTGKT+ F + L++L +G
Sbjct: 17 KGLRENGFVSMKEVQQKVIPMALEGHDIIGSSQTGTGKTLAFLVPTLQRLVSLGWGGGDG 76
Query: 418 LQVMILTPTREIAAQICDVIKQIGSH 495
L +++TPTRE+A QI DV+ +I +
Sbjct: 77 LGCLVITPTRELALQIFDVLSRIAKY 102
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 59.7 bits (138), Expect = 8e-08
Identities = 30/87 (34%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Frame = +1
Query: 241 RIYTRGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-- 414
++ + + GF++P+PIQ +PL G D++ A++G+GKT F + LEKL +++
Sbjct: 111 QLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLEKLKVHSAK 170
Query: 415 -GLQVMILTPTREIAAQICDVIKQIGS 492
G + +IL+P+RE+A Q V+K +
Sbjct: 171 VGARAVILSPSRELALQTLKVVKDFSA 197
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = +3
Query: 501 GSDVEVVM--GGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDK 674
G+D+ + M GG S+ E I++ +PGR HL V ++L+ V+ DE D+
Sbjct: 198 GTDLRLAMLVGGDSLEEQFKMMMSNPDIIIATPGRFLHLKVEMELSLASVEYICFDEADR 257
Query: 675 LVEKPFLNDINYIFSALPNHKQVIMSSAT 761
L E F +N + ++LP+++Q ++ SAT
Sbjct: 258 LFELGFGEQMNELLASLPSNRQTLLFSAT 286
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 59.7 bits (138), Expect = 8e-08
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = +3
Query: 498 QGSDVEVVM--GGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECD 671
+G+D+ ++ GG S+ E I++ +PGR HL V ++LS VQ V DE D
Sbjct: 173 RGTDLRTILLVGGDSLEEQFNSMTTNPDIIIATPGRFLHLKVEMGLDLSSVQYIVFDEAD 232
Query: 672 KLVEKPFLNDINYIFSALPNHKQVIMSSAT 761
+L E F + I ALP +Q ++ SAT
Sbjct: 233 RLFEMGFAAQLAEILYALPTSRQTLLFSAT 262
Score = 58.0 bits (134), Expect = 3e-07
Identities = 30/82 (36%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Frame = +1
Query: 253 RGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN---GLQ 423
+ + GF+ P+PIQ VPL G D++ A++G+GKT F I +E+L ++ G +
Sbjct: 91 KAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIPMIERLKTHSAKVGAR 150
Query: 424 VMILTPTREIAAQICDVIKQIG 489
+I++P+RE+A Q V+K+ G
Sbjct: 151 GVIMSPSRELALQTLKVVKEFG 172
>UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2;
Corynebacterium|Rep: Putative RNA helicase -
Corynebacterium diphtheriae
Length = 452
Score = 59.3 bits (137), Expect = 1e-07
Identities = 31/99 (31%), Positives = 50/99 (50%)
Frame = +3
Query: 501 GSDVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKHLIVGNHINLSDVQLFVLDECDKLV 680
G V V+GG+S+ I V I+V +PGR + LI ++LS+V++ LDE D++
Sbjct: 102 GLRVLEVVGGVSIKRHITSLASPVDILVATPGRAQDLINQGKLSLSEVEISTLDEADQMA 161
Query: 681 EKPFLNDINYIFSALPNHKQVIMSSATFQNIARKSICKF 797
+ FL + + P Q + SAT K + +F
Sbjct: 162 DMGFLPQVTKLLELTPKTAQRLFFSATLDGDVNKLVDRF 200
Score = 41.1 bits (92), Expect = 0.031
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Frame = +1
Query: 271 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFS---IIALEKLNLNNGLQV--MIL 435
G P PIQ +P G D+L +G+GKT F I+ L++ ++ + +IL
Sbjct: 21 GIVDPFPIQEAAIPDAISGRDILGRGPTGSGKTFTFGLPMIVRLQESGVSKPSKPRGLIL 80
Query: 436 TPTREIAAQICDVIKQIGS 492
PTRE+AAQ+ + +++ S
Sbjct: 81 VPTRELAAQVRERLEEPAS 99
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,547,459
Number of Sequences: 1657284
Number of extensions: 14540821
Number of successful extensions: 38572
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 35485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37801
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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