Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40586
         (767 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5DP20 Cluster: Putative uncharacterized protein; n=1; ...    38   0.36 
UniRef50_Q7JZI2 Cluster: RE29825p; n=5; Endopterygota|Rep: RE298...    37   0.63 
UniRef50_UPI00015B5D2C Cluster: PREDICTED: similar to CG5492-PB;...    36   1.1  
UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep: Cyt...    35   2.6  
UniRef50_Q21ZY4 Cluster: Sensor protein; n=1; Rhodoferax ferrire...    33   5.9  
UniRef50_Q8ZYF2 Cluster: Proteasome beta subunit; n=5; Thermopro...    33   7.8  

>UniRef50_A5DP20 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 547

 Score = 37.5 bits (83), Expect = 0.36
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 152 SDNSSKDHSCLTLIPKQL-WNCLFCIGVL*CSFVGTI*VSFSKL 280
           +D + K    + L PK++ W+C+FCIGV+ C +   I  SF  L
Sbjct: 43  NDKNLKVMEAIKLYPKEIFWSCVFCIGVVMCGYDAAIITSFYAL 86


>UniRef50_Q7JZI2 Cluster: RE29825p; n=5; Endopterygota|Rep: RE29825p
           - Drosophila melanogaster (Fruit fly)
          Length = 236

 Score = 36.7 bits (81), Expect = 0.63
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = +1

Query: 559 MGMGGAMDSCGRCMKFSLICIHVITXXXXXXXXXXXXWVWTSRSFSSTLMSNNMF 723
           MG    MD CG+ +K+SL   + +             W    RSF + L+  N+F
Sbjct: 1   MGFSSRMDCCGQFVKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGTNLF 55


>UniRef50_UPI00015B5D2C Cluster: PREDICTED: similar to CG5492-PB;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           CG5492-PB - Nasonia vitripennis
          Length = 242

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +1

Query: 559 MGMGGAMDSCGRCMKFSLICIHVITXXXXXXXXXXXXWVWTSR-SFSSTLMSNNM 720
           MG    MD CGRCMK++L  ++ I             W    + ++ S L  NN+
Sbjct: 1   MGYDTEMDGCGRCMKYTLFVVNFIIFIGGLTITGLSIWALVQKVNYVSELTGNNL 55


>UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep:
           Cytochrome b - Spizellomyces punctatus
          Length = 396

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
 Frame = -1

Query: 680 VHTHSPMASAIAPPINVITWIHIRENFMHLPQLSIAP-PIPITLLHNIAVFVSLYS*PFL 504
           +HT++  ++   P +N++ WI +  NF  L  +   P   P  L+  I+  +      FL
Sbjct: 308 IHTNNVRSNRYRPLLNLLFWIFV-FNFFVLLWVGAKPIAQPYILIGQISTIIY-----FL 361

Query: 503 YFVKCALFYCLLP-LYEAHYKMFSYYFL--SCSLI 408
           YFV   +  C++  +Y      F Y+FL   CS++
Sbjct: 362 YFVILMILGCIMTYIYTKSNCFFIYFFLYFGCSIL 396


>UniRef50_Q21ZY4 Cluster: Sensor protein; n=1; Rhodoferax
           ferrireducens T118|Rep: Sensor protein - Rhodoferax
           ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)
          Length = 727

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +3

Query: 522 QRDKNGNVVEKSNGYGWSDG-QLREVHEVLSNMYPRNNIDWRGYSAGHRTMGVDVAFFLK 698
           +RD+ G++V ++  YG+    + R+ H+V++ +Y    ID +G + G  +  VD+    +
Sbjct: 428 RRDREGSMVAEAQPYGFESRIRHRDGHDVITRVYTAPLIDAQGQNQGWMSSVVDITAQKQ 487

Query: 699 HVDEQ 713
             D Q
Sbjct: 488 AEDRQ 492


>UniRef50_Q8ZYF2 Cluster: Proteasome beta subunit; n=5;
           Thermoproteaceae|Rep: Proteasome beta subunit -
           Pyrobaculum aerophilum
          Length = 202

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 18/63 (28%), Positives = 33/63 (52%)
 Frame = -1

Query: 683 DVHTHSPMASAIAPPINVITWIHIRENFMHLPQLSIAPPIPITLLHNIAVFVSLYS*PFL 504
           D H  + M+  +A   +V++++ +R    H  ++    PIPI+ L N    +  YS P++
Sbjct: 39  DDHVAATMSGGVADLQSVLSFLTLRA---HEYKIEYKRPIPISALVNYMSLILFYSRPYI 95

Query: 503 YFV 495
           Y V
Sbjct: 96  YIV 98


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,211,498
Number of Sequences: 1657284
Number of extensions: 13893088
Number of successful extensions: 33638
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33584
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)