Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40585
         (808 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1ZIK4 Cluster: Putative uncharacterized protein; n=3; ...    33   8.5  
UniRef50_A5JZM5 Cluster: Cation diffusion facilitator transporte...    33   8.5  

>UniRef50_A1ZIK4 Cluster: Putative uncharacterized protein; n=3;
           Microscilla marina ATCC 23134|Rep: Putative
           uncharacterized protein - Microscilla marina ATCC 23134
          Length = 495

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -3

Query: 362 ISYFYINSME*HLNKFFR--IQVTDLVQTYRPRFFSFYLPGHRH 237
           I+ FY   ME H++K FR      D  QTY+PR+     P H H
Sbjct: 334 ITQFYQQKMEAHMDKPFRPGSSWADFEQTYQPRYSLADAPVHHH 377


>UniRef50_A5JZM5 Cluster: Cation diffusion facilitator transporter
           domain containing protein; n=2; Plasmodium|Rep: Cation
           diffusion facilitator transporter domain containing
           protein - Plasmodium vivax
          Length = 592

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -1

Query: 217 YSVFDDEISLFPEVQTLSGKTVILTPFIK-IVKISIYFVIKQHSHDVNSGHFIGHR 53
           Y ++     LF +VQT+ G  + +T F+  +  I I FV+K HSH      FIG R
Sbjct: 116 YILYSAVFRLF-DVQTVDGYIMFVTAFVSTLANIFIAFVLKVHSHGF---EFIGQR 167


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,679,954
Number of Sequences: 1657284
Number of extensions: 11308199
Number of successful extensions: 18688
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18687
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)