Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40584
(785 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 159 2e-41
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 159 2e-41
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 4.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 4.3
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 5.6
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 159 bits (387), Expect = 2e-41
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = +2
Query: 257 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 436
PIERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANVIRYFPTQAL
Sbjct: 30 PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQAL 89
Query: 437 NFAFKDKYKQVFLGGVDKKTQFWR 508
NFAFKDKYKQVFLGGVDK TQF R
Sbjct: 90 NFAFKDKYKQVFLGGVDKNTQFLR 113
Score = 145 bits (352), Expect = 4e-37
Identities = 68/94 (72%), Positives = 75/94 (79%)
Frame = +1
Query: 502 LAYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDG 681
L YF TSLCFVYPLDFARTRLAADVGK G+REF+GLGNC++KIFK+DG
Sbjct: 112 LRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADG 171
Query: 682 LIGLYRGFGVSVQGIIIYRASYFRFLRTARGMLP 783
+ GLYRGFGVSVQGIIIYRA+YF F TARGMLP
Sbjct: 172 ITGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLP 205
Score = 51.6 bits (118), Expect = 8e-09
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +3
Query: 171 MSNLADPVAFAKDFLAGGISAAVSKTAV 254
MS LADPVAFAKDFLAGG++AA+SKT V
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTV 28
Score = 27.5 bits (58), Expect = 0.15
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +1
Query: 568 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 702
YP D R R+ G+ + + +C + I+K++G ++G
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275
Score = 27.5 bits (58), Expect = 0.15
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +2
Query: 257 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 415
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 21.4 bits (43), Expect = 9.8
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 317 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD 454
++ + G+ + +I K G+ +RG +V +A F F D
Sbjct: 153 EREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYD 198
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 159 bits (387), Expect = 2e-41
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = +2
Query: 257 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 436
PIERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANVIRYFPTQAL
Sbjct: 30 PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQAL 89
Query: 437 NFAFKDKYKQVFLGGVDKKTQFWR 508
NFAFKDKYKQVFLGGVDK TQF R
Sbjct: 90 NFAFKDKYKQVFLGGVDKNTQFLR 113
Score = 145 bits (352), Expect = 4e-37
Identities = 68/94 (72%), Positives = 75/94 (79%)
Frame = +1
Query: 502 LAYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDG 681
L YF TSLCFVYPLDFARTRLAADVGK G+REF+GLGNC++KIFK+DG
Sbjct: 112 LRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADG 171
Query: 682 LIGLYRGFGVSVQGIIIYRASYFRFLRTARGMLP 783
+ GLYRGFGVSVQGIIIYRA+YF F TARGMLP
Sbjct: 172 ITGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLP 205
Score = 51.6 bits (118), Expect = 8e-09
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +3
Query: 171 MSNLADPVAFAKDFLAGGISAAVSKTAV 254
MS LADPVAFAKDFLAGG++AA+SKT V
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTV 28
Score = 27.5 bits (58), Expect = 0.15
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +1
Query: 568 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 702
YP D R R+ G+ + + +C + I+K++G ++G
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275
Score = 27.5 bits (58), Expect = 0.15
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +2
Query: 257 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 415
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 21.4 bits (43), Expect = 9.8
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 317 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD 454
++ + G+ + +I K G+ +RG +V +A F F D
Sbjct: 153 EREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYD 198
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 265 LDWCTAVLETAAEIPPARKSLANAT 191
+DW TA ++P R+ L N T
Sbjct: 62 IDWSTADGHPVNDVPGVRRVLRNGT 86
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 265 LDWCTAVLETAAEIPPARKSLANAT 191
+DW TA ++P R+ L N T
Sbjct: 62 IDWSTADGHPVNDVPGVRRVLRNGT 86
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.2 bits (45), Expect = 5.6
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 722 VSSSTVPHTFGFYELPV 772
+S + V +T GFY +PV
Sbjct: 109 LSPAAVSYTSGFYHIPV 125
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,175
Number of Sequences: 438
Number of extensions: 4183
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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