Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40582
(701 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein. 101 2e-21
X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein... 101 2e-21
M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-bindi... 101 2e-21
L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A pro... 101 2e-21
BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain prote... 101 2e-21
BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein. 101 2e-21
BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain prote... 101 2e-21
BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain prote... 101 2e-21
AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant pr... 101 2e-21
BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein. 100 6e-21
M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive elemen... 99 8e-21
M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein. 99 8e-21
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 99 8e-21
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 99 8e-21
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 99 8e-21
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 99 8e-21
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 99 8e-21
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 99 8e-21
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 99 8e-21
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 99 8e-21
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 99 8e-21
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 99 8e-21
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 99 8e-21
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 99 8e-21
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 99 8e-21
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 99 8e-21
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 99 8e-21
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 100 1e-20
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 98 3e-20
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 98 3e-20
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 98 3e-20
DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein. 94 5e-19
AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-bo... 94 5e-19
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 44 5e-04
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 44 5e-04
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 44 5e-04
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 44 5e-04
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 44 5e-04
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 44 5e-04
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 44 5e-04
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 44 5e-04
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 44 5e-04
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 40 0.009
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 40 0.009
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 40 0.009
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 40 0.009
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 31 5.3
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 31 5.3
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 31 5.3
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 31 5.3
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 31 5.3
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 31 5.3
>X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein.
Length = 372
Score = 101 bits (242), Expect = 2e-21
Identities = 49/68 (72%), Positives = 55/68 (80%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 116 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 175
Query: 434 RGYHRQYF 457
R Y R Y+
Sbjct: 176 R-YRRGYY 182
Score = 57.2 bits (132), Expect = 5e-08
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
V+A KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKED 115
>X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein A
protein.
Length = 372
Score = 101 bits (242), Expect = 2e-21
Identities = 49/68 (72%), Positives = 55/68 (80%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 116 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 175
Query: 434 RGYHRQYF 457
R Y R Y+
Sbjct: 176 R-YRRGYY 182
Score = 57.2 bits (132), Expect = 5e-08
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
V+A KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKED 115
>M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-binding
protein A (dbpA) gene, 3' end. ).
Length = 412
Score = 101 bits (242), Expect = 2e-21
Identities = 49/68 (72%), Positives = 55/68 (80%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 186 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 245
Query: 434 RGYHRQYF 457
R Y R Y+
Sbjct: 246 R-YRRGYY 252
Score = 57.2 bits (132), Expect = 5e-08
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
V+A KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 156 VLATKVLGTVKWFNVRNGYGFINRNDTKED 185
>L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A
protein.
Length = 342
Score = 101 bits (242), Expect = 2e-21
Identities = 49/68 (72%), Positives = 55/68 (80%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 116 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 175
Query: 434 RGYHRQYF 457
R Y R Y+
Sbjct: 176 R-YRRGYY 182
Score = 57.2 bits (132), Expect = 5e-08
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
V+A KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKED 115
>BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 101 bits (242), Expect = 2e-21
Identities = 49/68 (72%), Positives = 55/68 (80%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 116 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 175
Query: 434 RGYHRQYF 457
R Y R Y+
Sbjct: 176 R-YRRGYY 182
Score = 57.2 bits (132), Expect = 5e-08
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
V+A KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKED 115
>BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 101 bits (242), Expect = 2e-21
Identities = 49/68 (72%), Positives = 55/68 (80%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 116 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 175
Query: 434 RGYHRQYF 457
R Y R Y+
Sbjct: 176 R-YRRGYY 182
Score = 57.2 bits (132), Expect = 5e-08
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
V+A KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKED 115
>BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 101 bits (242), Expect = 2e-21
Identities = 49/68 (72%), Positives = 55/68 (80%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 116 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 175
Query: 434 RGYHRQYF 457
R Y R Y+
Sbjct: 176 R-YRRGYY 182
Score = 57.2 bits (132), Expect = 5e-08
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
V+A KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKED 115
>BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 101 bits (242), Expect = 2e-21
Identities = 49/68 (72%), Positives = 55/68 (80%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 116 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 175
Query: 434 RGYHRQYF 457
R Y R Y+
Sbjct: 176 R-YRRGYY 182
Score = 57.2 bits (132), Expect = 5e-08
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
V+A KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKED 115
>AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant
protein.
Length = 134
Score = 101 bits (242), Expect = 2e-21
Identities = 49/68 (72%), Positives = 55/68 (80%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 49 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 108
Query: 434 RGYHRQYF 457
R Y R Y+
Sbjct: 109 R-YRRGYY 115
Score = 57.2 bits (132), Expect = 5e-08
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
V+A KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 19 VLATKVLGTVKWFNVRNGYGFINRNDTKED 48
>BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 100 bits (239), Expect = 6e-21
Identities = 48/68 (70%), Positives = 55/68 (80%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RS+GDGE VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 116 VFVHQTAIKKNNPRKYLRSLGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 175
Query: 434 RGYHRQYF 457
R Y R Y+
Sbjct: 176 R-YRRGYY 182
Score = 57.2 bits (132), Expect = 5e-08
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
V+A KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKED 115
>M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive element
binding protein-1 protein.
Length = 322
Score = 99 bits (238), Expect = 8e-21
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD
Sbjct: 83 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD-- 140
Query: 434 RGYHRQY 454
R ++R+Y
Sbjct: 141 RNHYRRY 147
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
VIA KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 53 VIATKVLGTVKWFNVRNGYGFINRNDTKED 82
>M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein.
Length = 320
Score = 99 bits (238), Expect = 8e-21
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD
Sbjct: 81 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD-- 138
Query: 434 RGYHRQY 454
R ++R+Y
Sbjct: 139 RNHYRRY 145
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
VIA KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKED 80
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 99 bits (238), Expect = 8e-21
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD
Sbjct: 124 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD-- 181
Query: 434 RGYHRQY 454
R ++R+Y
Sbjct: 182 RNHYRRY 188
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
VIA KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 94 VIATKVLGTVKWFNVRNGYGFINRNDTKED 123
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 99 bits (238), Expect = 8e-21
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD
Sbjct: 84 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD-- 141
Query: 434 RGYHRQY 454
R ++R+Y
Sbjct: 142 RNHYRRY 148
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
VIA KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 99 bits (238), Expect = 8e-21
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD
Sbjct: 84 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD-- 141
Query: 434 RGYHRQY 454
R ++R+Y
Sbjct: 142 RNHYRRY 148
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
VIA KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 99 bits (238), Expect = 8e-21
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD
Sbjct: 84 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD-- 141
Query: 434 RGYHRQY 454
R ++R+Y
Sbjct: 142 RNHYRRY 148
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
VIA KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 99 bits (238), Expect = 8e-21
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD
Sbjct: 84 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD-- 141
Query: 434 RGYHRQY 454
R ++R+Y
Sbjct: 142 RNHYRRY 148
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
VIA KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 99 bits (238), Expect = 8e-21
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD
Sbjct: 84 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD-- 141
Query: 434 RGYHRQY 454
R ++R+Y
Sbjct: 142 RNHYRRY 148
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
VIA KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 99 bits (238), Expect = 8e-21
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD
Sbjct: 84 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD-- 141
Query: 434 RGYHRQY 454
R ++R+Y
Sbjct: 142 RNHYRRY 148
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
VIA KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 99 bits (238), Expect = 8e-21
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD
Sbjct: 84 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD-- 141
Query: 434 RGYHRQY 454
R ++R+Y
Sbjct: 142 RNHYRRY 148
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
VIA KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 99 bits (238), Expect = 8e-21
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD
Sbjct: 84 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD-- 141
Query: 434 RGYHRQY 454
R ++R+Y
Sbjct: 142 RNHYRRY 148
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
VIA KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 99 bits (238), Expect = 8e-21
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD
Sbjct: 84 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD-- 141
Query: 434 RGYHRQY 454
R ++R+Y
Sbjct: 142 RNHYRRY 148
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
VIA KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 99 bits (238), Expect = 8e-21
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD
Sbjct: 84 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD-- 141
Query: 434 RGYHRQY 454
R ++R+Y
Sbjct: 142 RNHYRRY 148
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
VIA KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 99 bits (238), Expect = 8e-21
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD
Sbjct: 84 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD-- 141
Query: 434 RGYHRQY 454
R ++R+Y
Sbjct: 142 RNHYRRY 148
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
VIA KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 99 bits (238), Expect = 8e-21
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD
Sbjct: 84 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD-- 141
Query: 434 RGYHRQY 454
R ++R+Y
Sbjct: 142 RNHYRRY 148
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
VIA KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 99 bits (238), Expect = 8e-21
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD
Sbjct: 84 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD-- 141
Query: 434 RGYHRQY 454
R ++R+Y
Sbjct: 142 RNHYRRY 148
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
VIA KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 99 bits (238), Expect = 8e-21
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD
Sbjct: 84 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD-- 141
Query: 434 RGYHRQY 454
R ++R+Y
Sbjct: 142 RNHYRRY 148
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
VIA KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAAD
Sbjct: 84 VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGEEAANVTGPGGVPVQGSKYAAD-- 141
Query: 434 RGYHRQY 454
R ++R+Y
Sbjct: 142 RNHYRRY 148
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
VIA KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKED 83
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 97.9 bits (233), Expect = 3e-20
Identities = 47/69 (68%), Positives = 54/69 (78%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGPGG PVKGS YA ++R
Sbjct: 119 VFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRR 178
Query: 434 RGYHRQYFP 460
+ R++ P
Sbjct: 179 KS--RRFIP 185
Score = 54.8 bits (126), Expect = 3e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
V+A +V GTVKWFNV++GYGFI RNDTKED
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKED 118
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 97.9 bits (233), Expect = 3e-20
Identities = 47/69 (68%), Positives = 54/69 (78%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGPGG PVKGS YA ++R
Sbjct: 119 VFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRR 178
Query: 434 RGYHRQYFP 460
+ R++ P
Sbjct: 179 KS--RRFIP 185
Score = 54.8 bits (126), Expect = 3e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
V+A +V GTVKWFNV++GYGFI RNDTKED
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKED 118
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 97.9 bits (233), Expect = 3e-20
Identities = 47/69 (68%), Positives = 54/69 (78%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVHQTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGPGG PVKGS YA ++R
Sbjct: 119 VFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRR 178
Query: 434 RGYHRQYFP 460
+ R++ P
Sbjct: 179 KS--RRFIP 185
Score = 54.8 bits (126), Expect = 3e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
V+A +V GTVKWFNV++GYGFI RNDTKED
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKED 118
>DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein.
Length = 319
Score = 93.9 bits (223), Expect = 5e-19
Identities = 45/67 (67%), Positives = 53/67 (79%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
+FVH TA +NNPRK +RSVGDGE VEF VV GEKG +AA VTGPGG PV+GS YAAD
Sbjct: 80 VFVHHTAXKKNNPRKYLRSVGDGEXVEFDVVEGEKGAKAANVTGPGGVPVQGSKYAAD-- 137
Query: 434 RGYHRQY 454
R ++R+Y
Sbjct: 138 RNHYRRY 144
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFIXRNDTKED 254
VIA KV GTVKWFNV++GYGFI RNDTKED
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFIHRNDTKED 79
>AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-box
binding protein variant protein.
Length = 268
Score = 93.9 bits (223), Expect = 5e-19
Identities = 46/69 (66%), Positives = 53/69 (76%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 433
LF +QTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGPGG PVKGS YA ++R
Sbjct: 23 LFPNQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRR 82
Query: 434 RGYHRQYFP 460
+ R++ P
Sbjct: 83 KS--RRFIP 89
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 412
+FVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 62 VFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 110
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 412
+FVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 62 VFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 110
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 412
+FVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 39 VFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 87
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 412
+FVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 39 VFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 87
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 412
+FVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 39 VFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 87
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 412
+FVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 39 VFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 87
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 412
+FVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 39 VFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 87
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 412
+FVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 62 VFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 110
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 412
+FVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 62 VFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 110
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 39.9 bits (89), Expect = 0.009
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGG 394
+FVHQ+ + + RS+ +GEAVEF KG E+ VTGPGG
Sbjct: 72 VFVHQSKLHM----EGFRSLKEGEAVEFTFKKSAKGLESIRVTGPGG 114
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 39.9 bits (89), Expect = 0.009
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGG 394
+FVHQ+ + + RS+ +GEAVEF KG E+ VTGPGG
Sbjct: 72 VFVHQSKLHM----EGFRSLKEGEAVEFTFKKSAKGLESIRVTGPGG 114
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 39.9 bits (89), Expect = 0.009
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGG 394
+FVHQ+ + + RS+ +GEAVEF KG E+ VTGPGG
Sbjct: 72 VFVHQSKLHM----EGFRSLKEGEAVEFTFKKSAKGLESIRVTGPGG 114
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 39.9 bits (89), Expect = 0.009
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +2
Query: 254 LFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGG 394
+FVHQ+ + + RS+ +GEAVEF KG E+ VTGPGG
Sbjct: 72 VFVHQSKLHM----EGFRSLKEGEAVEFTFKKSAKGLESIRVTGPGG 114
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 30.7 bits (66), Expect = 5.3
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 350 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 439
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 30.7 bits (66), Expect = 5.3
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 350 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 439
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 30.7 bits (66), Expect = 5.3
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 350 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 439
GE+GF G+ GP GEP K P A RG
Sbjct: 544 GERGFP--GLPGPSGEPGKQGPSGASGERG 571
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 30.7 bits (66), Expect = 5.3
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 350 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 439
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 30.7 bits (66), Expect = 5.3
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 350 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 439
GE+GF G+ GP GEP K P A RG
Sbjct: 965 GERGFP--GLPGPSGEPGKQGPSGASGERG 992
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 30.7 bits (66), Expect = 5.3
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 350 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 439
GE+GF G+ GP GEP K P A RG
Sbjct: 971 GERGFP--GLPGPSGEPGKQGPSGASGERG 998
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,734,767
Number of Sequences: 237096
Number of extensions: 1498443
Number of successful extensions: 5178
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 4854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5178
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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