Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40574
(424 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9P6X0 Cluster: Putative uncharacterized protein 68B2.0... 33 1.8
UniRef50_Q3YAF5 Cluster: Transcription factor protein Tcf; n=1; ... 33 2.4
UniRef50_Q8NA79 Cluster: CDNA FLJ35765 fis, clone TESTI2004941; ... 33 3.2
UniRef50_Q9W596 Cluster: Microtubule-associated protein futsch; ... 33 3.2
UniRef50_Q2H425 Cluster: Putative uncharacterized protein; n=1; ... 32 5.6
UniRef50_UPI00006CB1FB Cluster: cation channel family protein; n... 31 7.4
UniRef50_Q8RDE7 Cluster: Arginine/lysine/ornithine decarboxylase... 31 7.4
UniRef50_Q1F0S4 Cluster: Orn/Lys/Arg decarboxylase, major region... 31 7.4
UniRef50_A5AEJ0 Cluster: Putative uncharacterized protein; n=2; ... 31 7.4
UniRef50_Q8VB83 Cluster: Wsv100; n=3; Shrimp white spot syndrome... 31 9.7
UniRef50_Q1GCY8 Cluster: Sensor protein; n=1; Silicibacter sp. T... 31 9.7
UniRef50_Q18U98 Cluster: Orn/Lys/Arg decarboxylase, major region... 31 9.7
UniRef50_Q95VC3 Cluster: High mobility group protein; n=1; Naegl... 31 9.7
UniRef50_A2R474 Cluster: Similarity to hypothetical protein EAA6... 31 9.7
>UniRef50_Q9P6X0 Cluster: Putative uncharacterized protein 68B2.060;
n=1; Neurospora crassa|Rep: Putative uncharacterized
protein 68B2.060 - Neurospora crassa
Length = 598
Score = 33.5 bits (73), Expect = 1.8
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +1
Query: 205 KAIEEHKKVSGSDVISRSQPNTNLTHGPAQVQ----AKRHQKKKALR*KTLKPRLKNPLK 372
+A +EHKK S +++ SQP+++ T P + + A+R ++K K P+
Sbjct: 41 RARKEHKKSDSSPIVTNSQPDSDSTQNPRRSESSKTARREREKSTSGTKRSSMSSSRPVP 100
Query: 373 HLLVTAKSLRREG 411
T +L R G
Sbjct: 101 RHANTTGNLHRRG 113
>UniRef50_Q3YAF5 Cluster: Transcription factor protein Tcf; n=1;
Branchiostoma floridae|Rep: Transcription factor protein
Tcf - Branchiostoma floridae (Florida lancelet)
(Amphioxus)
Length = 444
Score = 33.1 bits (72), Expect = 2.4
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 271 NLTHGPAQVQAKRHQKKKALR*KTLKPRLKNPLKHLLVTAKSLR 402
NL H P+Q+ K+ QKK+ + KP +K PL ++ K +R
Sbjct: 270 NLKHDPSQMHQKQDQKKEP---EKKKPHIKKPLNAFMLYMKEMR 310
>UniRef50_Q8NA79 Cluster: CDNA FLJ35765 fis, clone TESTI2004941;
n=37; Amniota|Rep: CDNA FLJ35765 fis, clone TESTI2004941
- Homo sapiens (Human)
Length = 629
Score = 32.7 bits (71), Expect = 3.2
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 238 SDVISRSQPNTNLTHGPAQVQAKRHQKKKALR*KTLKPR-LKNPLKHLLVTAKSLRREGL 414
SDV S + N+ GP + ++ QKKK L ++ K L++ + L +A S R++GL
Sbjct: 54 SDVDSTQTSSLNMLKGPWGLSDQKVQKKKVLHAESTKTSLLRSQMSSLRSSACSERKDGL 113
Query: 415 DKA 423
A
Sbjct: 114 SNA 116
>UniRef50_Q9W596 Cluster: Microtubule-associated protein futsch; n=6;
melanogaster subgroup|Rep: Microtubule-associated protein
futsch - Drosophila melanogaster (Fruit fly)
Length = 5412
Score = 32.7 bits (71), Expect = 3.2
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = +1
Query: 175 FLKEADEHFEKAIEEHKKVSGSDVIS 252
FL +AD+ F++A+EEH + G++V+S
Sbjct: 5120 FLDQADKDFQRALEEHVQARGAEVMS 5145
>UniRef50_Q2H425 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1741
Score = 31.9 bits (69), Expect = 5.6
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 205 KAIEEHKKVSGSDVISRSQPNTNLT-HGPAQVQAKRHQKKKALR*KTLKPRLKNPLKHLL 381
+A+E V+GS+ S S P+ N H P K + AL +TLK L + + +
Sbjct: 361 RALEREGPVTGSEEDSNSAPDHNTPEHSPPPSPMKPTPRHSALESETLKTSLGHAQRTIQ 420
Query: 382 VTAKSLRREGLDK 420
++ RE +K
Sbjct: 421 TLRTNIHREKTEK 433
>UniRef50_UPI00006CB1FB Cluster: cation channel family protein; n=1;
Tetrahymena thermophila SB210|Rep: cation channel family
protein - Tetrahymena thermophila SB210
Length = 1163
Score = 31.5 bits (68), Expect = 7.4
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 199 FEKAIEEHKKVSGSDVISRSQPNTNLTHGPAQVQAKRHQKKK 324
FE+ +E K+ G+ I Q NT T GP Q + R+++KK
Sbjct: 387 FEQFGKEQKQKEGNMYIINRQDNTQSTIGPRQKKIMRNKRKK 428
>UniRef50_Q8RDE7 Cluster: Arginine/lysine/ornithine decarboxylases;
n=3; Thermoanaerobacter|Rep: Arginine/lysine/ornithine
decarboxylases - Thermoanaerobacter tengcongensis
Length = 472
Score = 31.5 bits (68), Expect = 7.4
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -1
Query: 349 VLMSFNVMLSSF-DVVLLELERDRVSSSYLAVILRLHQNHSPSYVL 215
V+ S + L+SF +L L DRV L L L Q+ SPSY+L
Sbjct: 213 VVQSLHKTLTSFTQTSILHLNSDRVDVDRLKYSLSLFQSTSPSYIL 258
>UniRef50_Q1F0S4 Cluster: Orn/Lys/Arg decarboxylase, major
region:Orn/Lys/Arg decarboxylase- like; n=2;
Clostridiaceae|Rep: Orn/Lys/Arg decarboxylase, major
region:Orn/Lys/Arg decarboxylase- like - Clostridium
oremlandii OhILAs
Length = 482
Score = 31.5 bits (68), Expect = 7.4
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = -1
Query: 349 VLMSFNVMLSSF-DVVLLELERDRVSSSYLAVILRLHQNHSPSYVL 215
V+ S + L SF +L ++ +RV L +L++HQ+ SPSY+L
Sbjct: 221 VVQSTHKTLPSFTQSSMLHIQGNRVQREKLKSMLKIHQSSSPSYLL 266
>UniRef50_A5AEJ0 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 494
Score = 31.5 bits (68), Expect = 7.4
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 172 TFLKEADEHFEKAIEEHKKVSGSDVISRSQPNTNLT 279
+F K+ ++ F++A++ H+KV V S+P+T T
Sbjct: 389 SFTKDIEDSFQRALDSHQKVDSMSVGQSSRPSTAST 424
>UniRef50_Q8VB83 Cluster: Wsv100; n=3; Shrimp white spot syndrome
virus|Rep: Wsv100 - White spot syndrome virus (WSSV)
Length = 624
Score = 31.1 bits (67), Expect = 9.7
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 265 NTNLTHGPAQVQAKRHQKKKALR*KTLKPRLKNPLKHLLV 384
++++ G ++ + K+ +KKK K LK +K+PL HL V
Sbjct: 119 SSSIPVGISEAELKKMEKKKRKEIKKLKKMMKDPLPHLYV 158
>UniRef50_Q1GCY8 Cluster: Sensor protein; n=1; Silicibacter sp.
TM1040|Rep: Sensor protein - Silicibacter sp. (strain
TM1040)
Length = 1096
Score = 31.1 bits (67), Expect = 9.7
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = -1
Query: 316 FDVVLLELERDRVSS---SYLAVILRLHQNHSPSYVLR*LSQSVHR 188
FD V + RD V+ +YLAV +RLH ++ + +LR S+HR
Sbjct: 199 FDPVFQDYARDAVTGQLVAYLAVPVRLHGSNKGAMILRMPPNSLHR 244
>UniRef50_Q18U98 Cluster: Orn/Lys/Arg decarboxylase, major region;
n=2; Desulfitobacterium hafniense|Rep: Orn/Lys/Arg
decarboxylase, major region - Desulfitobacterium
hafniense (strain DCB-2)
Length = 472
Score = 31.1 bits (67), Expect = 9.7
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = -1
Query: 349 VLMSFNVMLSSF-DVVLLELERDRVSSSYLAVILRLHQNHSPSYVL-R*LSQSV-HRPPS 179
VL S + LS+ +L ++ R+ S L L L Q+ SPSY+L L ++V H S
Sbjct: 215 VLCSTHKTLSALTQAAMLHVQGSRIPLSALKEALELLQSSSPSYLLMASLERAVEHALES 274
Query: 178 RR*HLIS*ALQHL 140
RR L+ A+Q L
Sbjct: 275 RRWELLHEAVQEL 287
>UniRef50_Q95VC3 Cluster: High mobility group protein; n=1;
Naegleria fowleri|Rep: High mobility group protein -
Naegleria fowleri
Length = 209
Score = 31.1 bits (67), Expect = 9.7
Identities = 21/80 (26%), Positives = 42/80 (52%)
Frame = +1
Query: 181 KEADEHFEKAIEEHKKVSGSDVISRSQPNTNLTHGPAQVQAKRHQKKKALR*KTLKPRLK 360
K ++ ++ +E+HKKV D +++P + ++ +++ KKK R K K K
Sbjct: 65 KPYNDRYKIEMEKHKKVM--DEYKKNKPESE---EESEEESEEEGKKKRKRTKKDKDAPK 119
Query: 361 NPLKHLLVTAKSLRREGLDK 420
PL ++ ++ R+E L+K
Sbjct: 120 RPLSSYMLFSQDKRKELLEK 139
>UniRef50_A2R474 Cluster: Similarity to hypothetical protein
EAA65239.1 - Aspergillus nidulans; n=1; Aspergillus
niger|Rep: Similarity to hypothetical protein EAA65239.1
- Aspergillus nidulans - Aspergillus niger
Length = 234
Score = 31.1 bits (67), Expect = 9.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 232 SGSDVISRSQPNTNLTHGPAQVQAKRHQKK 321
SG + QP++ T GPA+ QA RH KK
Sbjct: 173 SGEPSSHKGQPHSRNTDGPAKPQAARHPKK 202
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 314,815,753
Number of Sequences: 1657284
Number of extensions: 4764056
Number of successful extensions: 10785
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10784
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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